Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
16:58:49 (290107): wrapper (7.7.26015): starting
16:58:49 (290107): wrapper: running run_atlas (--nthreads 4)
[2026-03-22 16:58:49] Arguments: --nthreads 4
[2026-03-22 16:58:49] Threads: 4
[2026-03-22 16:58:49] Checking for CVMFS
[2026-03-22 16:58:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-22 16:58:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-22 16:58:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-22 16:58:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-22 16:58:50] 2.13.3.0 67972 1086 54948 157589 2 90 2516110 4096000 2610 130560 0 588246 99.204 317828 1248 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-22 16:58:50] CVMFS is ok
[2026-03-22 16:58:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-22 16:58:50] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-22 16:58:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-22 16:58:50] Further information can be found at the LHC@home message board.
[2026-03-22 16:58:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-22 16:58:50] Checking for apptainer binary...
[2026-03-22 16:58:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-22 16:58:50] Running /usr/bin/apptainer --version
[2026-03-22 16:58:50] apptainer version 1.4.5
[2026-03-22 16:58:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-22 16:58:50] T3500-Ubuntu
[2026-03-22 16:58:50] apptainer works
[2026-03-22 16:58:50] Set ATHENA_PROC_NUMBER=4
[2026-03-22 16:58:50] Set ATHENA_CORE_NUMBER=4
[2026-03-22 16:58:50] Starting ATLAS job with PandaID=7062189669
[2026-03-22 16:58:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-22 23:12:52]  *** The last 200 lines of the pilot log: ***
[2026-03-22 23:12:52] 2026-03-23 03:11:51,000 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/6/workernode_map.json
[2026-03-22 23:12:52] 2026-03-23 03:11:51,000 | INFO     | this job has now completed (state=finished)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,000 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,000 | INFO     | log transfer has been attempted: DONE
[2026-03-22 23:12:52] 2026-03-23 03:11:51,001 | INFO     | job 7062189669 has finished - writing final server update
[2026-03-22 23:12:52] 2026-03-23 03:11:51,001 | INFO     | total number of processed events: 400 (read)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,006 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/6/PanDA_Pilot-7062189669/memory_monitor_summary.json (trf name=prmon)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,007 | INFO     | extracted standard info from prmon json
[2026-03-22 23:12:52] 2026-03-23 03:11:51,007 | INFO     | extracted standard memory fields from prmon json
[2026-03-22 23:12:52] 2026-03-23 03:11:51,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-22 23:12:52] 2026-03-23 03:11:51,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-22 23:12:52] 2026-03-23 03:11:51,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-22 23:12:52] 2026-03-23 03:11:51,013 | INFO     | fitting pss+swap vs Time
[2026-03-22 23:12:52] 2026-03-23 03:11:51,014 | INFO     | sum of square deviations: 15202619927.5
[2026-03-22 23:12:52] 2026-03-23 03:11:51,016 | INFO     | sum of deviations: 3863575696.4999895
[2026-03-22 23:12:52] 2026-03-23 03:11:51,017 | INFO     | mean x: 1774224311.5
[2026-03-22 23:12:52] 2026-03-23 03:11:51,017 | INFO     | mean y: 2354940.718579235
[2026-03-22 23:12:52] 2026-03-23 03:11:51,017 | INFO     | intersect: -448544309.7225304
[2026-03-22 23:12:52] 2026-03-23 03:11:51,017 | INFO     | chi2: 1.4308210480221644
[2026-03-22 23:12:52] 2026-03-23 03:11:51,018 | INFO     | sum of square deviations: 14588031660.0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,021 | INFO     | sum of deviations: 3636431795.9999976
[2026-03-22 23:12:52] 2026-03-23 03:11:51,021 | INFO     | mean x: 1774224159.0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,021 | INFO     | mean y: 2354884.3628808865
[2026-03-22 23:12:52] 2026-03-23 03:11:51,021 | INFO     | intersect: -439914867.67705643
[2026-03-22 23:12:52] 2026-03-23 03:11:51,021 | INFO     | chi2: 1.4307767885519334
[2026-03-22 23:12:52] 2026-03-23 03:11:51,022 | INFO     | current chi2=1.4307767885519334 (change=0.003093291805581974 %)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,022 | INFO     | right removable region: 360
[2026-03-22 23:12:52] 2026-03-23 03:11:51,022 | INFO     | sum of square deviations: 14588031660.0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,025 | INFO     | sum of deviations: -31814697254.000004
[2026-03-22 23:12:52] 2026-03-23 03:11:51,025 | INFO     | mean x: 1774224464.0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,025 | INFO     | mean y: 2363698.052631579
[2026-03-22 23:12:52] 2026-03-23 03:11:51,025 | INFO     | intersect: 3871728359.330069
[2026-03-22 23:12:52] 2026-03-23 03:11:51,026 | INFO     | chi2: 0.1950288461174387
[2026-03-22 23:12:52] 2026-03-23 03:11:51,026 | INFO     | current chi2=0.1950288461174387 (change=86.36944526451936 %)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,026 | INFO     | sum of square deviations: 13990234405.0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,029 | INFO     | sum of deviations: -20794282588.500004
[2026-03-22 23:12:52] 2026-03-23 03:11:51,029 | INFO     | mean x: 1774224616.5
[2026-03-22 23:12:52] 2026-03-23 03:11:51,030 | INFO     | mean y: 2360886.3511235956
[2026-03-22 23:12:52] 2026-03-23 03:11:51,030 | INFO     | intersect: 2639466669.066853
[2026-03-22 23:12:52] 2026-03-23 03:11:51,030 | INFO     | chi2: 0.16737353450769524
[2026-03-22 23:12:52] 2026-03-23 03:11:51,030 | INFO     | current chi2=0.16737353450769524 (change=14.180113434650854 %)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,030 | INFO     | left removable region: 20
[2026-03-22 23:12:52] 2026-03-23 03:11:51,031 | INFO     | sum of square deviations: 12187409905.0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,033 | INFO     | sum of deviations: 6536292221.5
[2026-03-22 23:12:52] 2026-03-23 03:11:51,033 | INFO     | mean x: 1774224738.5
[2026-03-22 23:12:52] 2026-03-23 03:11:51,034 | INFO     | mean y: 2353465.65
[2026-03-22 23:12:52] 2026-03-23 03:11:51,034 | INFO     | intersect: -949190090.1872993
[2026-03-22 23:12:52] 2026-03-23 03:11:51,034 | INFO     | chi2: 0.0042359110599351265
[2026-03-22 23:12:52] 2026-03-23 03:11:51,034 | INFO     | current memory leak: 0.54 B/s (using 340 data points, chi2=0.00)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | could have reported an average CPU frequency of 3199 MHz (16 samples)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | ..............................
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . Timing measurements:
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . get job = 0 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . initial setup = 8 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . payload setup = 11 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . stage-in = 0 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . payload execution = 22327 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . stage-out = 2 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | . log creation = 0 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,035 | INFO     | ..............................
[2026-03-22 23:12:52] 2026-03-23 03:11:51,120 | INFO     | 
[2026-03-22 23:12:52] 2026-03-23 03:11:51,120 | INFO     | job summary report
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | --------------------------------------------------
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | PanDA job id: 7062189669
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | task id: 49176718
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | errors: (none)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | pilot state: finished 
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | transexitcode: 0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | exeerrorcode: 0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | exeerrordiag: 
[2026-03-22 23:12:52] 2026-03-23 03:11:51,121 | INFO     | exitcode: 0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | exitmsg: OK
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | cpuconsumptiontime: 87100 s
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | nevents: 400
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | neventsw: 0
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | pid: 298924
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | pgrp: 298924
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | corecount: 4
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | event service: False
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | sizes: {0: 2280244, 11: 2280244, 22342: 2314769, 22343: 2314768, 22347: 2323850, 22348: 2324228}
[2026-03-22 23:12:52] 2026-03-23 03:11:51,122 | INFO     | --------------------------------------------------
[2026-03-22 23:12:52] 2026-03-23 03:11:51,123 | INFO     | 
[2026-03-22 23:12:52] 2026-03-23 03:11:51,123 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/6
[2026-03-22 23:12:52] 2026-03-23 03:11:51,148 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,150 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,151 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-22 23:12:52] 2026-03-23 03:11:51,151 | INFO     | job 7062189669 has completed (purged errors)
[2026-03-22 23:12:52] 2026-03-23 03:11:51,151 | INFO     | overall cleanup function is called
[2026-03-22 23:12:52] 2026-03-23 03:11:51,868 | WARNING  | process 298924 can no longer be monitored (due to stat problems) - aborting
[2026-03-22 23:12:52] 2026-03-23 03:11:51,991 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-22 23:12:52] 2026-03-23 03:11:52,160 | INFO     | --- collectZombieJob: --- 10, [298924]
[2026-03-22 23:12:52] 2026-03-23 03:11:52,160 | INFO     | zombie collector waiting for pid 298924
[2026-03-22 23:12:52] 2026-03-23 03:11:52,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-22 23:12:52] 2026-03-23 03:11:52,160 | INFO     | collected zombie processes
[2026-03-22 23:12:52] 2026-03-23 03:11:52,160 | INFO     | will attempt to kill all subprocesses of pid=298924
[2026-03-22 23:12:52] 2026-03-23 03:11:52,197 | INFO     | number of running child processes to parent process 298924: 1
[2026-03-22 23:12:52] 2026-03-23 03:11:52,197 | INFO     | maximum number of monitored processes: 6
[2026-03-22 23:12:52] 2026-03-23 03:11:52,197 | INFO     | aborting job monitoring since job object (job id=7062189669) has expired
[2026-03-22 23:12:52] 2026-03-23 03:11:52,401 | INFO     | process IDs to be killed: [298924] (in reverse order)
[2026-03-22 23:12:52] 2026-03-23 03:11:52,483 | WARNING  | found no corresponding commands to process id(s)
[2026-03-22 23:12:52] 2026-03-23 03:11:52,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-22 23:12:52] 2026-03-23 03:11:52,490 | INFO     | did not find any defunct processes belonging to 298924
[2026-03-22 23:12:52] 2026-03-23 03:11:52,496 | INFO     | did not find any defunct processes belonging to 298924
[2026-03-22 23:12:52] 2026-03-23 03:11:52,496 | INFO     | ready for new job
[2026-03-22 23:12:52] 2026-03-23 03:11:52,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-22 23:12:52] 2026-03-23 03:11:52,499 | INFO     | **************************************
[2026-03-22 23:12:52] 2026-03-23 03:11:52,499 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-22 23:12:52] 2026-03-23 03:11:52,499 | INFO     | **************************************
[2026-03-22 23:12:52] 2026-03-23 03:11:52,499 | INFO     | 
[2026-03-22 23:12:52] 2026-03-23 03:11:52,501 | INFO     | architecture information:
[2026-03-22 23:12:52] 2026-03-23 03:11:52,502 | INFO     | executing command: cat /etc/os-release
[2026-03-22 23:12:52] 2026-03-23 03:11:52,525 | INFO     | cat /etc/os-release:
[2026-03-22 23:12:52] NAME="CentOS Linux"
[2026-03-22 23:12:52] VERSION="7 (Core)"
[2026-03-22 23:12:52] ID="centos"
[2026-03-22 23:12:52] ID_LIKE="rhel fedora"
[2026-03-22 23:12:52] VERSION_ID="7"
[2026-03-22 23:12:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-22 23:12:52] ANSI_COLOR="0;31"
[2026-03-22 23:12:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-22 23:12:52] HOME_URL="https://www.centos.org/"
[2026-03-22 23:12:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-22 23:12:52] 
[2026-03-22 23:12:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-22 23:12:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-22 23:12:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-22 23:12:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-22 23:12:52] 
[2026-03-22 23:12:52] 2026-03-23 03:11:52,526 | INFO     | **************************************
[2026-03-22 23:12:52] 2026-03-23 03:11:53,029 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/6
[2026-03-22 23:12:52] 2026-03-23 03:11:53,050 | INFO     | sufficient remaining disk space (407763943424 B)
[2026-03-22 23:12:52] 2026-03-23 03:11:53,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-22 23:12:52] 2026-03-23 03:11:53,050 | INFO     | current server update state: UPDATING_FINAL
[2026-03-22 23:12:52] 2026-03-23 03:11:53,050 | INFO     | update_server=False
[2026-03-22 23:12:52] 2026-03-23 03:11:53,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-22 23:12:52] 2026-03-23 03:11:53,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-22 23:12:52] 2026-03-23 03:11:53,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-22 23:12:52] 2026-03-23 03:11:53,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-22 23:12:52] 2026-03-23 03:11:53,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-22 23:12:52] 2026-03-23 03:11:53,052 | INFO     | will abort loop
[2026-03-22 23:12:52] 2026-03-23 03:11:53,086 | INFO     | all payload control threads have been joined
[2026-03-22 23:12:52] 2026-03-23 03:11:53,138 | INFO     | all data control threads have been joined
[2026-03-22 23:12:52] 2026-03-23 03:11:53,541 | INFO     | all job control threads have been joined
[2026-03-22 23:12:52] 2026-03-23 03:11:54,053 | INFO     | [job] retrieve thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,057 | INFO     | [job] queue monitor thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,057 | INFO     | [job] job monitor thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,090 | INFO     | [payload] control thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,144 | INFO     | [data] control thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,322 | INFO     | [data] copytool_in thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,546 | INFO     | [job] control thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,716 | INFO     | [payload] validate_post thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:54,853 | INFO     | [job] validate thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:55,008 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:55,057 | INFO     | [data] copytool_out thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:55,103 | INFO     | [job] create_data_payload thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:55,211 | INFO     | [payload] execute_payloads thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:55,480 | INFO     | [payload] validate_pre thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:55,628 | INFO     | [payload] failed_post thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:11:57,058 | INFO     | [data] queue_monitor thread has finished
[2026-03-22 23:12:52] 2026-03-23 03:12:23,513 | INFO     | PID=294314 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-22 23:12:52] 2026-03-23 03:12:23,513 | INFO     | .. there are 4 such processes running
[2026-03-22 23:12:52] 2026-03-23 03:12:23,514 | INFO     | found 0 job(s) in 20 queues
[2026-03-22 23:12:52] 2026-03-23 03:12:23,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-22 23:12:52] 2026-03-23 03:12:23,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-22 23:12:52] 2026-03-23 03:12:45,245 | INFO     | [monitor] cgroup control has ended
[2026-03-22 23:12:52] 2026-03-23 03:12:46,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128740398077760)>', '<ExcThread(monitor, started 128740117198592)>']
[2026-03-22 23:12:52] 2026-03-23 03:12:47,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-22 23:12:52] 2026-03-23 03:12:47,633 | INFO     | [monitor] control thread has ended
[2026-03-22 23:12:52] 2026-03-23 03:12:51,816 | INFO     | all workflow threads have been joined
[2026-03-22 23:12:52] 2026-03-23 03:12:51,816 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-22 23:12:52] 2026-03-23 03:12:51,816 | INFO     | traces error code: 0
[2026-03-22 23:12:52] 2026-03-23 03:12:51,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-22 23:12:52] 2026-03-23 03:12:51,962 [wrapper] ==== pilot stdout END ====
[2026-03-22 23:12:52] 2026-03-23 03:12:51,965 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-22 23:12:52] 2026-03-23 03:12:51,969 [wrapper] pilotpid: 294314
[2026-03-22 23:12:52] 2026-03-23 03:12:51,973 [wrapper] Pilot exit status: 0
[2026-03-22 23:12:52] 2026-03-23 03:12:51,987 [wrapper] pandaids: 7062189669
[2026-03-22 23:12:52] 2026-03-23 03:12:52,041 [wrapper] cleanup supervisor_pilot  351367 294315
[2026-03-22 23:12:52] 2026-03-23 03:12:52,045 [wrapper] Test setup, not cleaning
[2026-03-22 23:12:52] 2026-03-23 03:12:52,049 [wrapper] apfmon messages muted
[2026-03-22 23:12:52] 2026-03-23 03:12:52,052 [wrapper] ==== wrapper stdout END ====
[2026-03-22 23:12:52] 2026-03-23 03:12:52,056 [wrapper] ==== wrapper stderr END ====
[2026-03-22 23:12:52]  *** Error codes and diagnostics ***
[2026-03-22 23:12:52]     "exeErrorCode": 0,
[2026-03-22 23:12:52]     "exeErrorDiag": "",
[2026-03-22 23:12:52]     "pilotErrorCode": 0,
[2026-03-22 23:12:52]     "pilotErrorDiag": "",
[2026-03-22 23:12:52]  *** Listing of results directory ***
[2026-03-22 23:12:52] total 501012
[2026-03-22 23:12:52] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 22 15:17 pilot3.tar.gz
[2026-03-22 23:12:52] -rwx------ 1 whitlerd whitlerd     36322 Mar 22 15:18 runpilot2-wrapper.sh
[2026-03-22 23:12:52] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 22 15:19 queuedata.json
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 22 16:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-22 23:12:52] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 22 16:58 run_atlas
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 22 16:58 job.xml
[2026-03-22 23:12:52] -rw-r--r-- 2 whitlerd whitlerd 249220643 Mar 22 16:58 EVNT.49134973._000007.pool.root.1
[2026-03-22 23:12:52] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 22 16:58 shared
[2026-03-22 23:12:52] -rw-r--r-- 2 whitlerd whitlerd    597545 Mar 22 16:58 input.tar.gz
[2026-03-22 23:12:52] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 22 16:58 start_atlas.sh
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 22 16:58 boinc_setup_complete
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd      9201 Mar 22 16:58 init_data.xml
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 22 16:58 boinc_lockfile
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd      2597 Mar 22 16:58 pandaJob.out
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd   1010671 Mar 22 16:59 agis_schedconf.cvmfs.json
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd       429 Mar 22 16:59 workernode_map.json
[2026-03-22 23:12:52] drwx------ 5 whitlerd whitlerd      4096 Mar 22 16:59 pilot3
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd 252475898 Mar 22 23:11 HITS.49176718._000272.pool.root.1
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 22 23:11 boinc_task_state.xml
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd      1043 Mar 22 23:11 memory_monitor_summary.json
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd   1511579 Mar 22 23:11 agis_ddmendpoints.agis.ALL.json
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd    524234 Mar 22 23:11 log.49176718._000272.job.log.tgz.1
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd      6331 Mar 22 23:11 heartbeat.json
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd        95 Mar 22 23:12 pilot_heartbeat.json
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 22 23:12 boinc_mmap_file
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 22 23:12 wrapper_checkpoint.txt
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd      4835 Mar 22 23:12 pilotlog.txt
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd   3172267 Mar 22 23:12 log.49176718._000272.job.log.1
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd       357 Mar 22 23:12 output.list
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 22 23:12 runtime_log
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd   3717120 Mar 22 23:12 result.tar.gz
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd      9020 Mar 22 23:12 runtime_log.err
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd       654 Mar 22 23:12 b3zKDmeUdO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmb25LDmUTkO4m.diag
[2026-03-22 23:12:52] -rw-rw-r-- 1 whitlerd whitlerd     21401 Mar 22 23:12 stderr.txt
[2026-03-22 23:12:52] HITS file was successfully produced:
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd 252475898 Mar 22 23:11 shared/HITS.pool.root.1
[2026-03-22 23:12:52]  *** Contents of shared directory: ***
[2026-03-22 23:12:52] total 494180
[2026-03-22 23:12:52] -rw-r--r-- 2 whitlerd whitlerd 249220643 Mar 22 16:58 ATLAS.root_0
[2026-03-22 23:12:52] -rw-r--r-- 2 whitlerd whitlerd    597545 Mar 22 16:58 input.tar.gz
[2026-03-22 23:12:52] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 22 16:58 start_atlas.sh
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd 252475898 Mar 22 23:11 HITS.pool.root.1
[2026-03-22 23:12:52] -rw------- 1 whitlerd whitlerd   3717120 Mar 22 23:12 result.tar.gz
23:12:53 (290107): run_atlas exited; CPU time 87608.309691
23:12:53 (290107): called boinc_finish(0)

</stderr_txt>
]]>

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