Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:22:34 (21707): wrapper (7.7.26015): starting
02:22:34 (21707): wrapper: running run_atlas (--nthreads 8)
[2026-03-23 02:22:34] Arguments: --nthreads 8
[2026-03-23 02:22:34] Threads: 8
[2026-03-23 02:22:34] Checking for CVMFS
[2026-03-23 02:22:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 02:22:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 02:22:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 02:22:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 02:22:39] 2.11.2.0 6904 139870 135716 157596 0 53 23133777 25165825 4493 130560 164 46196733 99.832 33121967 1108 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-23 02:22:39] CVMFS is ok
[2026-03-23 02:22:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 02:22:39] Checking for apptainer binary...
[2026-03-23 02:22:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 02:22:39] Running /usr/bin/apptainer --version
[2026-03-23 02:22:39] apptainer version 1.3.2-1.el7
[2026-03-23 02:22:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 02:23:14] cg-vwn474.simple-grid.lan
[2026-03-23 02:23:14] apptainer works
[2026-03-23 02:23:14] Set ATHENA_PROC_NUMBER=8
[2026-03-23 02:23:14] Set ATHENA_CORE_NUMBER=8
[2026-03-23 02:23:14] Starting ATLAS job with PandaID=7062041939
[2026-03-23 02:23:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 13:54:57]  *** The last 200 lines of the pilot log: ***
[2026-03-23 13:54:57] 2026-03-23 12:53:42,003 | INFO     | extracted standard info from prmon json
[2026-03-23 13:54:57] 2026-03-23 12:53:42,004 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 13:54:57] 2026-03-23 12:53:42,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 13:54:57] 2026-03-23 12:53:42,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 13:54:57] 2026-03-23 12:53:42,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 13:54:57] 2026-03-23 12:53:42,017 | INFO     | fitting pss+swap vs Time
[2026-03-23 13:54:57] 2026-03-23 12:53:42,018 | INFO     | sum of square deviations: 93261385827.5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,031 | INFO     | sum of deviations: 222795299590.5001
[2026-03-23 13:54:57] 2026-03-23 12:53:42,032 | INFO     | mean x: 1774249984.5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,032 | INFO     | mean y: 2505499.813432836
[2026-03-23 13:54:57] 2026-03-23 12:53:42,032 | INFO     | intersect: -4236060690.6597643
[2026-03-23 13:54:57] 2026-03-23 12:53:42,033 | INFO     | chi2: 5.946739028638493
[2026-03-23 13:54:57] 2026-03-23 12:53:42,038 | INFO     | sum of square deviations: 91188984180.0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,056 | INFO     | sum of deviations: 264662289049.99997
[2026-03-23 13:54:57] 2026-03-23 12:53:42,056 | INFO     | mean x: 1774249832.0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,056 | INFO     | mean y: 2508560.4917293233
[2026-03-23 13:54:57] 2026-03-23 12:53:42,056 | INFO     | intersect: -5146984287.863606
[2026-03-23 13:54:57] 2026-03-23 12:53:42,057 | INFO     | chi2: 5.189003364127432
[2026-03-23 13:54:57] 2026-03-23 12:53:42,057 | INFO     | current chi2=5.189003364127432 (change=12.74203661640328 %)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,058 | INFO     | right removable region: 664
[2026-03-23 13:54:57] 2026-03-23 12:53:42,059 | INFO     | sum of square deviations: 91188984180.0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,075 | INFO     | sum of deviations: -10180424932.000008
[2026-03-23 13:54:57] 2026-03-23 12:53:42,075 | INFO     | mean x: 1774250137.0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,075 | INFO     | mean y: 2522638.0315789473
[2026-03-23 13:54:57] 2026-03-23 12:53:42,075 | INFO     | intersect: 200601610.9770941
[2026-03-23 13:54:57] 2026-03-23 12:53:42,076 | INFO     | chi2: 1.645655936900991
[2026-03-23 13:54:57] 2026-03-23 12:53:42,076 | INFO     | current chi2=1.645655936900991 (change=72.32675035888091 %)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,077 | INFO     | sum of square deviations: 89147513345.0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,097 | INFO     | sum of deviations: -81539427394.5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,097 | INFO     | mean x: 1774250289.5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,097 | INFO     | mean y: 2527951.540909091
[2026-03-23 13:54:57] 2026-03-23 12:53:42,097 | INFO     | intersect: 1625359001.2470198
[2026-03-23 13:54:57] 2026-03-23 12:53:42,098 | INFO     | chi2: 1.0094888816724832
[2026-03-23 13:54:57] 2026-03-23 12:53:42,098 | INFO     | current chi2=1.0094888816724832 (change=38.65735485550538 %)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,099 | INFO     | sum of square deviations: 87136740760.0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,116 | INFO     | sum of deviations: -81403725361.00003
[2026-03-23 13:54:57] 2026-03-23 12:53:42,116 | INFO     | mean x: 1774250442.0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,117 | INFO     | mean y: 2527937.386259542
[2026-03-23 13:54:57] 2026-03-23 12:53:42,117 | INFO     | intersect: 1660044553.7123728
[2026-03-23 13:54:57] 2026-03-23 12:53:42,117 | INFO     | chi2: 0.9952029186203306
[2026-03-23 13:54:57] 2026-03-23 12:53:42,118 | INFO     | current chi2=0.9952029186203306 (change=1.4151679440474991 %)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,118 | INFO     | left removable region: 30
[2026-03-23 13:54:57] 2026-03-23 12:53:42,119 | INFO     | sum of square deviations: 79021472322.5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,129 | INFO     | sum of deviations: 21093681141.5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,130 | INFO     | mean x: 1774250716.5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,130 | INFO     | mean y: 2526490.335962145
[2026-03-23 13:54:57] 2026-03-23 12:53:42,130 | INFO     | intersect: -471085020.2948345
[2026-03-23 13:54:57] 2026-03-23 12:53:42,131 | INFO     | chi2: 0.12144579960035226
[2026-03-23 13:54:57] 2026-03-23 12:53:42,131 | INFO     | current memory leak: 0.27 B/s (using 634 data points, chi2=0.12)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,132 | INFO     | could have reported an average CPU frequency of 2249 MHz (26 samples)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,132 | INFO     | ..............................
[2026-03-23 13:54:57] 2026-03-23 12:53:42,132 | INFO     | . Timing measurements:
[2026-03-23 13:54:57] 2026-03-23 12:53:42,132 | INFO     | . get job = 0 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,132 | INFO     | . initial setup = 113 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,132 | INFO     | . payload setup = 133 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,133 | INFO     | . stage-in = 0 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,133 | INFO     | . payload execution = 40949 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,133 | INFO     | . stage-out = 4 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,133 | INFO     | . log creation = 1 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,133 | INFO     | ..............................
[2026-03-23 13:54:57] 2026-03-23 12:53:42,614 | INFO     | 
[2026-03-23 13:54:57] 2026-03-23 12:53:42,614 | INFO     | job summary report
[2026-03-23 13:54:57] 2026-03-23 12:53:42,614 | INFO     | --------------------------------------------------
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | PanDA job id: 7062041939
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | task id: 49178217
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | errors: (none)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | pilot state: finished 
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | transexitcode: 0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | exeerrorcode: 0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | exeerrordiag: 
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | exitcode: 0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | exitmsg: OK
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | cpuconsumptiontime: 162421 s
[2026-03-23 13:54:57] 2026-03-23 12:53:42,615 | INFO     | nevents: 400
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | neventsw: 0
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | pid: 30345
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | pgrp: 30345
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | corecount: 8
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | event service: False
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | sizes: {0: 2279162, 1: 2279847, 2: 2280308, 12: 2280308, 41087: 2323055, 41092: 2332053, 41094: 2332237, 41096: 2332431}
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | --------------------------------------------------
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | 
[2026-03-23 13:54:57] 2026-03-23 12:53:42,616 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-23 13:54:57] 2026-03-23 12:53:42,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,778 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 13:54:57] 2026-03-23 12:53:42,780 | INFO     | job 7062041939 has completed (purged errors)
[2026-03-23 13:54:57] 2026-03-23 12:53:42,780 | INFO     | overall cleanup function is called
[2026-03-23 13:54:57] 2026-03-23 12:53:42,810 | INFO     | PID=25801 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-23 13:54:57] 2026-03-23 12:53:42,810 | INFO     | .. there are 9 such processes running
[2026-03-23 13:54:57] 2026-03-23 12:53:43,804 | INFO     | --- collectZombieJob: --- 10, [30345]
[2026-03-23 13:54:57] 2026-03-23 12:53:43,804 | INFO     | zombie collector waiting for pid 30345
[2026-03-23 13:54:57] 2026-03-23 12:53:43,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 13:54:57] 2026-03-23 12:53:43,805 | INFO     | collected zombie processes
[2026-03-23 13:54:57] 2026-03-23 12:53:43,805 | INFO     | will attempt to kill all subprocesses of pid=30345
[2026-03-23 13:54:57] 2026-03-23 12:53:43,916 | INFO     | process IDs to be killed: [30345] (in reverse order)
[2026-03-23 13:54:57] 2026-03-23 12:53:44,828 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 13:54:57] 2026-03-23 12:53:44,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 13:54:57] 2026-03-23 12:53:44,831 | INFO     | did not find any defunct processes belonging to 30345
[2026-03-23 13:54:57] 2026-03-23 12:53:44,833 | INFO     | did not find any defunct processes belonging to 30345
[2026-03-23 13:54:57] 2026-03-23 12:53:44,834 | INFO     | ready for new job
[2026-03-23 13:54:57] 2026-03-23 12:53:44,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 13:54:57] 2026-03-23 12:53:44,837 | INFO     | **************************************
[2026-03-23 13:54:57] 2026-03-23 12:53:44,837 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 13:54:57] 2026-03-23 12:53:44,837 | INFO     | **************************************
[2026-03-23 13:54:57] 2026-03-23 12:53:44,837 | INFO     | 
[2026-03-23 13:54:57] 2026-03-23 12:53:44,838 | INFO     | pilot is running in a VM
[2026-03-23 13:54:57] 2026-03-23 12:53:44,838 | INFO     | architecture information:
[2026-03-23 13:54:57] 2026-03-23 12:53:44,838 | INFO     | executing command: cat /etc/os-release
[2026-03-23 13:54:57] 2026-03-23 12:53:45,141 | INFO     | cat /etc/os-release:
[2026-03-23 13:54:57] NAME="CentOS Linux"
[2026-03-23 13:54:57] VERSION="7 (Core)"
[2026-03-23 13:54:57] ID="centos"
[2026-03-23 13:54:57] ID_LIKE="rhel fedora"
[2026-03-23 13:54:57] VERSION_ID="7"
[2026-03-23 13:54:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 13:54:57] ANSI_COLOR="0;31"
[2026-03-23 13:54:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 13:54:57] HOME_URL="https://www.centos.org/"
[2026-03-23 13:54:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 13:54:57] 
[2026-03-23 13:54:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 13:54:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 13:54:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 13:54:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 13:54:57] 
[2026-03-23 13:54:57] 2026-03-23 12:53:45,142 | INFO     | **************************************
[2026-03-23 13:54:57] 2026-03-23 12:53:45,645 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-23 13:54:57] 2026-03-23 12:53:45,831 | INFO     | sufficient remaining disk space (495307456512 B)
[2026-03-23 13:54:57] 2026-03-23 12:53:45,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 13:54:57] 2026-03-23 12:53:45,831 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 13:54:57] 2026-03-23 12:53:45,831 | INFO     | update_server=False
[2026-03-23 13:54:57] 2026-03-23 12:53:45,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 13:54:57] 2026-03-23 12:53:45,844 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-23 13:54:57] 2026-03-23 12:53:45,844 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-23 13:54:57] 2026-03-23 12:53:45,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 13:54:57] 2026-03-23 12:53:45,845 | INFO     | will abort loop
[2026-03-23 13:54:57] 2026-03-23 12:53:45,913 | INFO     | all job control threads have been joined
[2026-03-23 13:54:57] 2026-03-23 12:53:46,402 | INFO     | all data control threads have been joined
[2026-03-23 13:54:57] 2026-03-23 12:53:46,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 13:54:57] 2026-03-23 12:53:46,609 | INFO     | all payload control threads have been joined
[2026-03-23 13:54:57] 2026-03-23 12:53:46,837 | INFO     | [job] retrieve thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:46,849 | INFO     | [job] job monitor thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:46,854 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:46,919 | INFO     | [job] control thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:46,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 13:54:57] 2026-03-23 12:53:47,221 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:47,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 13:54:57] 2026-03-23 12:53:47,378 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:47,408 | INFO     | [data] control thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:47,615 | INFO     | [payload] control thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:47,750 | INFO     | [data] copytool_in thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:47,799 | INFO     | [payload] validate_post thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:48,044 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:48,048 | INFO     | [payload] failed_post thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:48,063 | INFO     | [job] validate thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:48,264 | INFO     | [job] queue monitor thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:48,946 | INFO     | [data] copytool_out thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:53:50,591 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 13:54:57] 2026-03-23 12:54:15,011 | INFO     | PID=25801 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-23 13:54:57] 2026-03-23 12:54:15,011 | INFO     | .. there are 9 such processes running
[2026-03-23 13:54:57] 2026-03-23 12:54:15,013 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 13:54:57] 2026-03-23 12:54:15,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 13:54:57] 2026-03-23 12:54:15,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 13:54:57] 2026-03-23 12:54:45,361 | INFO     | [monitor] cgroup control has ended
[2026-03-23 13:54:57] 2026-03-23 12:54:47,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633474721600)>', '<ExcThread(monitor, started 139633044207360)>']
[2026-03-23 13:54:57] 2026-03-23 12:54:48,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 13:54:57] 2026-03-23 12:54:48,211 | INFO     | [monitor] control thread has ended
[2026-03-23 13:54:57] 2026-03-23 12:54:52,267 | INFO     | all workflow threads have been joined
[2026-03-23 13:54:57] 2026-03-23 12:54:52,267 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 13:54:57] 2026-03-23 12:54:52,268 | INFO     | traces error code: 0
[2026-03-23 13:54:57] 2026-03-23 12:54:52,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 13:54:57] 2026-03-23 12:54:52,673 [wrapper] ==== pilot stdout END ====
[2026-03-23 13:54:57] 2026-03-23 12:54:52,815 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 13:54:57] 2026-03-23 12:54:52,918 [wrapper] pilotpid: 25801
[2026-03-23 13:54:57] 2026-03-23 12:54:53,040 [wrapper] Pilot exit status: 0
[2026-03-23 13:54:57] 2026-03-23 12:54:53,566 [wrapper] pandaids: 7062041939
[2026-03-23 13:54:57] 2026-03-23 12:54:54,709 [wrapper] cleanup supervisor_pilot 27517 25802
[2026-03-23 13:54:57] 2026-03-23 12:54:54,814 [wrapper] Test setup, not cleaning
[2026-03-23 13:54:57] 2026-03-23 12:54:54,891 [wrapper] apfmon messages muted
[2026-03-23 13:54:57] 2026-03-23 12:54:54,957 [wrapper] ==== wrapper stdout END ====
[2026-03-23 13:54:57] 2026-03-23 12:54:55,043 [wrapper] ==== wrapper stderr END ====
[2026-03-23 13:54:57]  *** Error codes and diagnostics ***
[2026-03-23 13:54:57]     "exeErrorCode": 0,
[2026-03-23 13:54:57]     "exeErrorDiag": "",
[2026-03-23 13:54:57]     "pilotErrorCode": 0,
[2026-03-23 13:54:57]     "pilotErrorDiag": "",
[2026-03-23 13:54:57]  *** Listing of results directory ***
[2026-03-23 13:54:57] total 497232
[2026-03-23 13:54:57] -rwx------. 1 boinc boinc     36322 Mar 22 18:31 runpilot2-wrapper.sh
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc    585013 Mar 22 18:36 pilot3.tar.gz
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc      5111 Mar 22 18:53 queuedata.json
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc       100 Mar 23 02:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 13:54:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 02:22 run_atlas
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc       105 Mar 23 02:22 job.xml
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc      6392 Mar 23 02:22 init_data.xml
[2026-03-23 13:54:57] -rw-r--r--. 2 boinc boinc 240750794 Mar 23 02:22 EVNT.49128307._000010.pool.root.1
[2026-03-23 13:54:57] -rw-r--r--. 2 boinc boinc     15845 Mar 23 02:22 start_atlas.sh
[2026-03-23 13:54:57] drwxrwx--x. 2 boinc boinc        68 Mar 23 02:22 shared
[2026-03-23 13:54:57] -rw-r--r--. 2 boinc boinc    597549 Mar 23 02:22 input.tar.gz
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc         0 Mar 23 02:22 boinc_lockfile
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc      2613 Mar 23 02:23 pandaJob.out
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc       415 Mar 23 02:28 workernode_map.json
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc   1010663 Mar 23 02:28 agis_schedconf.cvmfs.json
[2026-03-23 13:54:57] drwx------. 5 boinc boinc      4096 Mar 23 02:28 pilot3
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc 251492381 Mar 23 13:52 HITS.49178217._000644.pool.root.1
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc       532 Mar 23 13:53 boinc_task_state.xml
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc      1016 Mar 23 13:53 memory_monitor_summary.json
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc   1511579 Mar 23 13:53 agis_ddmendpoints.agis.ALL.json
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc    838296 Mar 23 13:53 log.49178217._000644.job.log.tgz.1
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc      6315 Mar 23 13:53 heartbeat.json
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc        95 Mar 23 13:54 pilot_heartbeat.json
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc        29 Mar 23 13:54 wrapper_checkpoint.txt
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc      8192 Mar 23 13:54 boinc_mmap_file
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc      5066 Mar 23 13:54 pilotlog.txt
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc   5659200 Mar 23 13:54 log.49178217._000644.job.log.1
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc       357 Mar 23 13:54 output.list
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc       620 Mar 23 13:54 runtime_log
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc   6512640 Mar 23 13:54 result.tar.gz
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc      8816 Mar 23 13:54 runtime_log.err
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc       658 Mar 23 13:54 j7VNDmOpbO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRn5LDmuWHX1n.diag
[2026-03-23 13:54:57] -rw-r--r--. 1 boinc boinc     20784 Mar 23 13:54 stderr.txt
[2026-03-23 13:54:57] HITS file was successfully produced:
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc 251492381 Mar 23 13:52 shared/HITS.pool.root.1
[2026-03-23 13:54:57]  *** Contents of shared directory: ***
[2026-03-23 13:54:57] total 487672
[2026-03-23 13:54:57] -rw-r--r--. 2 boinc boinc 240750794 Mar 23 02:22 ATLAS.root_0
[2026-03-23 13:54:57] -rw-r--r--. 2 boinc boinc     15845 Mar 23 02:22 start_atlas.sh
[2026-03-23 13:54:57] -rw-r--r--. 2 boinc boinc    597549 Mar 23 02:22 input.tar.gz
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc 251492381 Mar 23 13:52 HITS.pool.root.1
[2026-03-23 13:54:57] -rw-------. 1 boinc boinc   6512640 Mar 23 13:54 result.tar.gz
13:54:59 (21707): run_atlas exited; CPU time 163035.180961
13:54:59 (21707): called boinc_finish(0)

</stderr_txt>
]]>

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