Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:43:05 (20163): wrapper (7.7.26015): starting
00:43:05 (20163): wrapper: running run_atlas (--nthreads 8)
[2026-03-23 00:43:05] Arguments: --nthreads 8
[2026-03-23 00:43:05] Threads: 8
[2026-03-23 00:43:05] Checking for CVMFS
[2026-03-23 00:43:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 00:43:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 00:43:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 00:43:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 00:43:10] 2.11.2.0 1190 139115 137016 157594 2 54 22065983 25165824 4484 130560 163 47378146 99.814 34209392 1129 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-23 00:43:10] CVMFS is ok
[2026-03-23 00:43:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 00:43:10] Checking for apptainer binary...
[2026-03-23 00:43:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 00:43:10] Running /usr/bin/apptainer --version
[2026-03-23 00:43:10] apptainer version 1.3.2-1.el7
[2026-03-23 00:43:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 00:43:27] cg-vwn395.simple-grid.lan
[2026-03-23 00:43:27] apptainer works
[2026-03-23 00:43:28] Set ATHENA_PROC_NUMBER=8
[2026-03-23 00:43:28] Set ATHENA_CORE_NUMBER=8
[2026-03-23 00:43:28] Starting ATLAS job with PandaID=7056911674
[2026-03-23 00:43:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 05:46:11]  *** The last 200 lines of the pilot log: ***
[2026-03-23 05:46:11] 2026-03-23 04:45:01,642 | INFO     | job 7056911674 has finished - writing final server update
[2026-03-23 05:46:11] 2026-03-23 04:45:01,642 | INFO     | total number of processed events: 400 (read)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,644 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7056911674/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,645 | INFO     | extracted standard info from prmon json
[2026-03-23 05:46:11] 2026-03-23 04:45:01,645 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 05:46:11] 2026-03-23 04:45:01,645 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 05:46:11] 2026-03-23 04:45:01,646 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 05:46:11] 2026-03-23 04:45:01,646 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 05:46:11] 2026-03-23 04:45:01,651 | INFO     | fitting pss+swap vs Time
[2026-03-23 05:46:11] 2026-03-23 04:45:01,652 | INFO     | sum of square deviations: 7330250928.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,655 | INFO     | sum of deviations: 98902911566.00002
[2026-03-23 05:46:11] 2026-03-23 04:45:01,655 | INFO     | mean x: 1774232337.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,655 | INFO     | mean y: 2451017.2926829266
[2026-03-23 05:46:11] 2026-03-23 04:45:01,655 | INFO     | intersect: -23936257991.094013
[2026-03-23 05:46:11] 2026-03-23 04:45:01,656 | INFO     | chi2: 5.828692076326473
[2026-03-23 05:46:11] 2026-03-23 04:45:01,656 | INFO     | sum of square deviations: 6953769450.5
[2026-03-23 05:46:11] 2026-03-23 04:45:01,659 | INFO     | sum of deviations: 115863531516.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,659 | INFO     | mean x: 1774232184.5
[2026-03-23 05:46:11] 2026-03-23 04:45:01,660 | INFO     | mean y: 2457778.4468085105
[2026-03-23 05:46:11] 2026-03-23 04:45:01,660 | INFO     | intersect: -29559754211.58921
[2026-03-23 05:46:11] 2026-03-23 04:45:01,660 | INFO     | chi2: 5.094227903062998
[2026-03-23 05:46:11] 2026-03-23 04:45:01,660 | INFO     | current chi2=5.094227903062998 (change=12.60084018242341 %)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,660 | INFO     | right removable region: 281
[2026-03-23 05:46:11] 2026-03-23 04:45:01,661 | INFO     | sum of square deviations: 6953769450.5
[2026-03-23 05:46:11] 2026-03-23 04:45:01,664 | INFO     | sum of deviations: 3220327798.999996
[2026-03-23 05:46:11] 2026-03-23 04:45:01,664 | INFO     | mean x: 1774232489.5
[2026-03-23 05:46:11] 2026-03-23 04:45:01,664 | INFO     | mean y: 2489738.9787234045
[2026-03-23 05:46:11] 2026-03-23 04:45:01,664 | INFO     | intersect: -819166809.8179858
[2026-03-23 05:46:11] 2026-03-23 04:45:01,665 | INFO     | chi2: 1.5405977440900007
[2026-03-23 05:46:11] 2026-03-23 04:45:01,665 | INFO     | current chi2=1.5405977440900007 (change=73.568723070014 %)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,665 | INFO     | sum of square deviations: 6590404498.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,668 | INFO     | sum of deviations: -27230860855.000004
[2026-03-23 05:46:11] 2026-03-23 04:45:01,668 | INFO     | mean x: 1774232642.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,668 | INFO     | mean y: 2502423.357400722
[2026-03-23 05:46:11] 2026-03-23 04:45:01,668 | INFO     | intersect: 7333445799.194638
[2026-03-23 05:46:11] 2026-03-23 04:45:01,669 | INFO     | chi2: 0.8863586595431876
[2026-03-23 05:46:11] 2026-03-23 04:45:01,669 | INFO     | current chi2=0.8863586595431876 (change=42.466574227866246 %)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,670 | INFO     | sum of square deviations: 6239923508.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,672 | INFO     | sum of deviations: -23686956024.5
[2026-03-23 05:46:11] 2026-03-23 04:45:01,672 | INFO     | mean x: 1774232794.5
[2026-03-23 05:46:11] 2026-03-23 04:45:01,673 | INFO     | mean y: 2500858.341911765
[2026-03-23 05:46:11] 2026-03-23 04:45:01,673 | INFO     | intersect: 6737547229.770484
[2026-03-23 05:46:11] 2026-03-23 04:45:01,673 | INFO     | chi2: 0.868606579650187
[2026-03-23 05:46:11] 2026-03-23 04:45:01,673 | INFO     | current chi2=0.868606579650187 (change=2.0028100026855644 %)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,673 | INFO     | left removable region: 30
[2026-03-23 05:46:11] 2026-03-23 04:45:01,674 | INFO     | sum of square deviations: 4903347750.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,676 | INFO     | sum of deviations: 9142876664.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,676 | INFO     | mean x: 1774233069.0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,676 | INFO     | mean y: 2501907.043824701
[2026-03-23 05:46:11] 2026-03-23 04:45:01,676 | INFO     | intersect: -3305767249.076543
[2026-03-23 05:46:11] 2026-03-23 04:45:01,677 | INFO     | chi2: 0.0012541892448191792
[2026-03-23 05:46:11] 2026-03-23 04:45:01,677 | INFO     | current memory leak: 1.86 B/s (using 251 data points, chi2=0.00)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,678 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,678 | INFO     | ..............................
[2026-03-23 05:46:11] 2026-03-23 04:45:01,678 | INFO     | . Timing measurements:
[2026-03-23 05:46:11] 2026-03-23 04:45:01,678 | INFO     | . get job = 0 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,678 | INFO     | . initial setup = 106 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,678 | INFO     | . payload setup = 172 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,679 | INFO     | . stage-in = 0 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,679 | INFO     | . payload execution = 17604 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,679 | INFO     | . stage-out = 3 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,679 | INFO     | . log creation = 1 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,679 | INFO     | ..............................
[2026-03-23 05:46:11] 2026-03-23 04:45:01,814 | INFO     | 
[2026-03-23 05:46:11] 2026-03-23 04:45:01,814 | INFO     | job summary report
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | --------------------------------------------------
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | PanDA job id: 7056911674
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | task id: 48967094
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | errors: (none)
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | pilot state: finished 
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | transexitcode: 0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | exeerrorcode: 0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,815 | INFO     | exeerrordiag: 
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | exitcode: 0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | exitmsg: OK
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | cpuconsumptiontime: 68286 s
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | nevents: 400
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | neventsw: 0
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | pid: 28965
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | pgrp: 28965
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | corecount: 8
[2026-03-23 05:46:11] 2026-03-23 04:45:01,816 | INFO     | event service: False
[2026-03-23 05:46:11] 2026-03-23 04:45:01,817 | INFO     | sizes: {0: 2279140, 1: 2279826, 2: 2280287, 3: 2280287, 17781: 2312385, 17785: 2321385, 17786: 2321569, 17788: 2321763}
[2026-03-23 05:46:11] 2026-03-23 04:45:01,817 | INFO     | --------------------------------------------------
[2026-03-23 05:46:11] 2026-03-23 04:45:01,817 | INFO     | 
[2026-03-23 05:46:11] 2026-03-23 04:45:01,817 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-23 05:46:11] 2026-03-23 04:45:02,210 | INFO     | time since job start (17791s) is within the limit (345600.0s)
[2026-03-23 05:46:11] 2026-03-23 04:45:02,414 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,414 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,414 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,414 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,416 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 05:46:11] 2026-03-23 04:45:02,417 | INFO     | job 7056911674 has completed (purged errors)
[2026-03-23 05:46:11] 2026-03-23 04:45:02,417 | INFO     | overall cleanup function is called
[2026-03-23 05:46:11] 2026-03-23 04:45:03,429 | INFO     | --- collectZombieJob: --- 10, [28965]
[2026-03-23 05:46:11] 2026-03-23 04:45:03,429 | INFO     | zombie collector waiting for pid 28965
[2026-03-23 05:46:11] 2026-03-23 04:45:03,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 05:46:11] 2026-03-23 04:45:03,430 | INFO     | collected zombie processes
[2026-03-23 05:46:11] 2026-03-23 04:45:03,430 | INFO     | will attempt to kill all subprocesses of pid=28965
[2026-03-23 05:46:11] 2026-03-23 04:45:03,532 | INFO     | process IDs to be killed: [28965] (in reverse order)
[2026-03-23 05:46:11] 2026-03-23 04:45:03,923 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 05:46:11] 2026-03-23 04:45:03,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 05:46:11] 2026-03-23 04:45:03,926 | INFO     | did not find any defunct processes belonging to 28965
[2026-03-23 05:46:11] 2026-03-23 04:45:03,929 | INFO     | did not find any defunct processes belonging to 28965
[2026-03-23 05:46:11] 2026-03-23 04:45:03,930 | INFO     | ready for new job
[2026-03-23 05:46:11] 2026-03-23 04:45:03,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 05:46:11] 2026-03-23 04:45:03,932 | INFO     | **************************************
[2026-03-23 05:46:11] 2026-03-23 04:45:03,932 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 05:46:11] 2026-03-23 04:45:03,932 | INFO     | **************************************
[2026-03-23 05:46:11] 2026-03-23 04:45:03,933 | INFO     | 
[2026-03-23 05:46:11] 2026-03-23 04:45:03,933 | INFO     | pilot is running in a VM
[2026-03-23 05:46:11] 2026-03-23 04:45:03,933 | INFO     | architecture information:
[2026-03-23 05:46:11] 2026-03-23 04:45:03,934 | INFO     | executing command: cat /etc/os-release
[2026-03-23 05:46:11] 2026-03-23 04:45:03,957 | INFO     | cat /etc/os-release:
[2026-03-23 05:46:11] NAME="CentOS Linux"
[2026-03-23 05:46:11] VERSION="7 (Core)"
[2026-03-23 05:46:11] ID="centos"
[2026-03-23 05:46:11] ID_LIKE="rhel fedora"
[2026-03-23 05:46:11] VERSION_ID="7"
[2026-03-23 05:46:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 05:46:11] ANSI_COLOR="0;31"
[2026-03-23 05:46:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 05:46:11] HOME_URL="https://www.centos.org/"
[2026-03-23 05:46:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 05:46:11] 
[2026-03-23 05:46:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 05:46:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 05:46:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 05:46:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 05:46:11] 
[2026-03-23 05:46:11] 2026-03-23 04:45:03,957 | INFO     | **************************************
[2026-03-23 05:46:11] 2026-03-23 04:45:04,461 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-23 05:46:11] 2026-03-23 04:45:04,711 | INFO     | sufficient remaining disk space (495381905408 B)
[2026-03-23 05:46:11] 2026-03-23 04:45:04,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 05:46:11] 2026-03-23 04:45:04,712 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 05:46:11] 2026-03-23 04:45:04,712 | INFO     | update_server=False
[2026-03-23 05:46:11] 2026-03-23 04:45:04,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 05:46:11] 2026-03-23 04:45:04,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 05:46:11] 2026-03-23 04:45:04,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 05:46:11] 2026-03-23 04:45:04,821 | INFO     | aborting loop
[2026-03-23 05:46:11] 2026-03-23 04:45:05,242 | INFO     | all job control threads have been joined
[2026-03-23 05:46:11] 2026-03-23 04:45:05,658 | INFO     | all data control threads have been joined
[2026-03-23 05:46:11] 2026-03-23 04:45:05,717 | INFO     | [job] retrieve thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:05,771 | INFO     | [data] copytool_in thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:05,795 | INFO     | [payload] failed_post thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:05,827 | INFO     | [job] job monitor thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:05,970 | INFO     | all payload control threads have been joined
[2026-03-23 05:46:11] 2026-03-23 04:45:05,999 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,049 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,050 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,056 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,248 | INFO     | [job] control thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 05:46:11] 2026-03-23 04:45:06,664 | INFO     | [data] control thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,719 | INFO     | [data] copytool_out thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,767 | INFO     | [payload] validate_post thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 05:46:11] 2026-03-23 04:45:06,976 | INFO     | [payload] control thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:06,990 | INFO     | [job] validate thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:07,835 | INFO     | [job] queue monitor thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:10,284 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 05:46:11] 2026-03-23 04:45:35,419 | INFO     | PID=24266 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-23 05:46:11] 2026-03-23 04:45:35,420 | INFO     | .. there are 9 such processes running
[2026-03-23 05:46:11] 2026-03-23 04:45:35,420 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 05:46:11] 2026-03-23 04:45:35,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 05:46:11] 2026-03-23 04:45:35,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 05:46:11] 2026-03-23 04:46:00,895 | INFO     | [monitor] cgroup control has ended
[2026-03-23 05:46:11] 2026-03-23 04:46:02,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969728538432)>', '<ExcThread(monitor, started 139969142183680)>']
[2026-03-23 05:46:11] 2026-03-23 04:46:02,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 05:46:11] 2026-03-23 04:46:02,582 | INFO     | [monitor] control thread has ended
[2026-03-23 05:46:11] 2026-03-23 04:46:07,551 | INFO     | all workflow threads have been joined
[2026-03-23 05:46:11] 2026-03-23 04:46:07,551 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 05:46:11] 2026-03-23 04:46:07,552 | INFO     | traces error code: 0
[2026-03-23 05:46:11] 2026-03-23 04:46:07,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 05:46:11] 2026-03-23 04:46:07,905 [wrapper] ==== pilot stdout END ====
[2026-03-23 05:46:11] 2026-03-23 04:46:07,969 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 05:46:11] 2026-03-23 04:46:08,015 [wrapper] pilotpid: 24266
[2026-03-23 05:46:11] 2026-03-23 04:46:08,045 [wrapper] Pilot exit status: 0
[2026-03-23 05:46:11] 2026-03-23 04:46:08,565 [wrapper] pandaids: 7056911674
[2026-03-23 05:46:11] 2026-03-23 04:46:08,761 [wrapper] cleanup supervisor_pilot  4855 24267
[2026-03-23 05:46:11] 2026-03-23 04:46:08,771 [wrapper] Test setup, not cleaning
[2026-03-23 05:46:11] 2026-03-23 04:46:08,783 [wrapper] apfmon messages muted
[2026-03-23 05:46:11] 2026-03-23 04:46:08,795 [wrapper] ==== wrapper stdout END ====
[2026-03-23 05:46:11] 2026-03-23 04:46:08,921 [wrapper] ==== wrapper stderr END ====
[2026-03-23 05:46:11]  *** Error codes and diagnostics ***
[2026-03-23 05:46:11]     "exeErrorCode": 0,
[2026-03-23 05:46:11]     "exeErrorDiag": "",
[2026-03-23 05:46:11]     "pilotErrorCode": 0,
[2026-03-23 05:46:11]     "pilotErrorDiag": "",
[2026-03-23 05:46:11]  *** Listing of results directory ***
[2026-03-23 05:46:11] total 433764
[2026-03-23 05:46:11] -rwx------. 1 boinc boinc     36322 Mar 22 15:20 runpilot2-wrapper.sh
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc    585013 Mar 22 17:44 pilot3.tar.gz
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc      5111 Mar 22 18:19 queuedata.json
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc       100 Mar 23 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 05:46:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 00:43 run_atlas
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc       105 Mar 23 00:43 job.xml
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc      6392 Mar 23 00:43 init_data.xml
[2026-03-23 05:46:11] -rw-r--r--. 2 boinc boinc 218850870 Mar 23 00:43 EVNT.48967092._000455.pool.root.1
[2026-03-23 05:46:11] -rw-r--r--. 2 boinc boinc     15845 Mar 23 00:43 start_atlas.sh
[2026-03-23 05:46:11] drwxrwx--x. 2 boinc boinc        68 Mar 23 00:43 shared
[2026-03-23 05:46:11] -rw-r--r--. 2 boinc boinc    597549 Mar 23 00:43 input.tar.gz
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc         0 Mar 23 00:43 boinc_lockfile
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc      2601 Mar 23 00:43 pandaJob.out
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc       415 Mar 23 00:48 workernode_map.json
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc   1010663 Mar 23 00:48 agis_schedconf.cvmfs.json
[2026-03-23 05:46:11] drwx------. 5 boinc boinc      4096 Mar 23 00:48 pilot3
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc 215432042 Mar 23 05:43 HITS.48967094._011489.pool.root.1
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc       531 Mar 23 05:43 boinc_task_state.xml
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc        95 Mar 23 05:44 pilot_heartbeat.json
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc      1012 Mar 23 05:44 memory_monitor_summary.json
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc   1511579 Mar 23 05:44 agis_ddmendpoints.agis.ALL.json
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc    508962 Mar 23 05:44 log.48967094._011489.job.log.tgz.1
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc      6315 Mar 23 05:45 heartbeat.json
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc        28 Mar 23 05:45 wrapper_checkpoint.txt
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc      8192 Mar 23 05:45 boinc_mmap_file
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc      4881 Mar 23 05:46 pilotlog.txt
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc   2472324 Mar 23 05:46 log.48967094._011489.job.log.1
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc       357 Mar 23 05:46 output.list
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc       620 Mar 23 05:46 runtime_log
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc   3000320 Mar 23 05:46 result.tar.gz
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc       655 Mar 23 05:46 WV2NDmdqYO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZ04LDmdPVFAo.diag
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc      8832 Mar 23 05:46 runtime_log.err
[2026-03-23 05:46:11] -rw-r--r--. 1 boinc boinc     20729 Mar 23 05:46 stderr.txt
[2026-03-23 05:46:11] HITS file was successfully produced:
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc 215432042 Mar 23 05:43 shared/HITS.pool.root.1
[2026-03-23 05:46:11]  *** Contents of shared directory: ***
[2026-03-23 05:46:11] total 427640
[2026-03-23 05:46:11] -rw-r--r--. 2 boinc boinc 218850870 Mar 23 00:43 ATLAS.root_0
[2026-03-23 05:46:11] -rw-r--r--. 2 boinc boinc     15845 Mar 23 00:43 start_atlas.sh
[2026-03-23 05:46:11] -rw-r--r--. 2 boinc boinc    597549 Mar 23 00:43 input.tar.gz
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc 215432042 Mar 23 05:43 HITS.pool.root.1
[2026-03-23 05:46:11] -rw-------. 1 boinc boinc   3000320 Mar 23 05:46 result.tar.gz
05:46:13 (20163): run_atlas exited; CPU time 68543.733302
05:46:13 (20163): called boinc_finish(0)

</stderr_txt>
]]>

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