Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:05:14 (761506): wrapper (7.7.26015): starting
00:05:14 (761506): wrapper: running run_atlas (--nthreads 12)
[2026-03-23 00:05:14] Arguments: --nthreads 12
[2026-03-23 00:05:14] Threads: 12
[2026-03-23 00:05:14] Checking for CVMFS
[2026-03-23 00:05:14] No cvmfs_config command found, will try listing directly
[2026-03-23 00:05:14] CVMFS is ok
[2026-03-23 00:05:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 00:05:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 00:05:14] Further information can be found at the LHC@home message board.
[2026-03-23 00:05:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 00:05:14] Checking for apptainer binary...
[2026-03-23 00:05:14] which: no apptainer in ((null))
[2026-03-23 00:05:14] apptainer is not installed, using version from CVMFS
[2026-03-23 00:05:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 00:05:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-23 00:05:15] apptainer works
[2026-03-23 00:05:15] Set ATHENA_PROC_NUMBER=12
[2026-03-23 00:05:15] Set ATHENA_CORE_NUMBER=12
[2026-03-23 00:05:15] Starting ATLAS job with PandaID=7056890063
[2026-03-23 00:05:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 01:19:12]  *** The last 200 lines of the pilot log: ***
[2026-03-23 01:19:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-23 01:19:12]  is_altstaged=None
[2026-03-23 01:19:12]  is_tar=False
[2026-03-23 01:19:12]  lfn=log.49176186._000015.job.log.tgz.1
[2026-03-23 01:19:12]  mtime=0
[2026-03-23 01:19:12]  protocol_id=None
[2026-03-23 01:19:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-23 01:19:12]  replicas=None
[2026-03-23 01:19:12]  scope=mc23_13p6TeV
[2026-03-23 01:19:12]  status=None
[2026-03-23 01:19:12]  status_code=0
[2026-03-23 01:19:12]  storage_token=
[2026-03-23 01:19:12]  surl=/var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056890063/log.49176186._000015.job.log.tgz.1
[2026-03-23 01:19:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/a0/log.49176186._000015.job.log.tgz.1
[2026-03-23 01:19:12]  workdir=None
[2026-03-23 01:19:12] ]
[2026-03-23 01:19:12] 2026-03-23 00:18:03,660 | INFO     | transferring file log.49176186._000015.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056890063/log.49176186._000015.job.log.tgz.1 to /var/lib/
[2026-03-23 01:19:12] 2026-03-23 00:18:03,660 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056890063/log.49176186._000015.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/2/
[2026-03-23 01:19:12] 2026-03-23 00:18:03,675 | INFO     | adding to output.list: log.49176186._000015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/a0/log.49176186._000015.job.log.tg
[2026-03-23 01:19:12] 2026-03-23 00:18:03,676 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-23 01:19:12] 2026-03-23 00:18:03,676 | INFO     | summary of transferred files:
[2026-03-23 01:19:12] 2026-03-23 00:18:03,676 | INFO     |  -- lfn=log.49176186._000015.job.log.tgz.1, status_code=0, status=transferred
[2026-03-23 01:19:12] 2026-03-23 00:18:03,676 | INFO     | stage-out finished correctly
[2026-03-23 01:19:12] 2026-03-23 00:18:04,056 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-23 01:19:12] 2026-03-23 00:18:04,101 | INFO     | job 7056890063 has state=finished
[2026-03-23 01:19:12] 2026-03-23 00:18:04,101 | INFO     | preparing for final server update for job 7056890063 in state='finished'
[2026-03-23 01:19:12] 2026-03-23 00:18:04,102 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056890063/jobReport.json
[2026-03-23 01:19:12] 2026-03-23 00:18:04,103 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/2/workernode_map.json
[2026-03-23 01:19:12] 2026-03-23 00:18:04,104 | INFO     | this job has now completed (state=finished)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,104 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,104 | INFO     | log transfer has been attempted: DONE
[2026-03-23 01:19:12] 2026-03-23 00:18:04,104 | INFO     | job 7056890063 has finished - writing final server update
[2026-03-23 01:19:12] 2026-03-23 00:18:04,104 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3279285/.job.ad'
[2026-03-23 01:19:12] 2026-03-23 00:18:04,104 | INFO     | total number of processed events: 400 (read)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,123 | INFO     | time since job start (4357s) is within the limit (345600.0s)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,125 | INFO     | using path: /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056890063/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,126 | INFO     | extracted standard info from prmon json
[2026-03-23 01:19:12] 2026-03-23 00:18:04,126 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 01:19:12] 2026-03-23 00:18:04,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 01:19:12] 2026-03-23 00:18:04,126 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 01:19:12] 2026-03-23 00:18:04,126 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 01:19:12] 2026-03-23 00:18:04,127 | INFO     | fitting pss+swap vs Time
[2026-03-23 01:19:12] 2026-03-23 00:18:04,127 | INFO     | sum of square deviations: 81266640.0
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | sum of deviations: 608483723.0
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | mean x: 1774222975.5
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | mean y: 2708172.6875
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | intersect: -13281781029.331654
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | chi2: 0.0009609421750311511
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | current memory leak: 7.49 B/s (using 64 data points, chi2=0.00)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | could have reported an average CPU frequency of 3562 MHz (6 samples)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | ..............................
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . Timing measurements:
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . get job = 0 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . initial setup = 4 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . payload setup = 6 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . stage-in = 0 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . payload execution = 4334 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . stage-out = 0 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | . log creation = 0 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,128 | INFO     | ..............................
[2026-03-23 01:19:12] 2026-03-23 00:18:04,170 | INFO     | 
[2026-03-23 01:19:12] 2026-03-23 00:18:04,170 | INFO     | job summary report
[2026-03-23 01:19:12] 2026-03-23 00:18:04,170 | INFO     | --------------------------------------------------
[2026-03-23 01:19:12] 2026-03-23 00:18:04,170 | INFO     | PanDA job id: 7056890063
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | task id: 49176186
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | errors: (none)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | pilot state: finished 
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | transexitcode: 0
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | exeerrorcode: 0
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | exeerrordiag: 
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | exitcode: 0
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | exitmsg: OK
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | cpuconsumptiontime: 47443 s
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | nevents: 400
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | neventsw: 0
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | pid: 772248
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | pgrp: 772248
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | corecount: 12
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | event service: False
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | sizes: {0: 2280298, 11: 2280298, 4344: 2306342, 4345: 2315419, 4346: 2315613}
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | --------------------------------------------------
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | 
[2026-03-23 01:19:12] 2026-03-23 00:18:04,171 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/2
[2026-03-23 01:19:12] 2026-03-23 00:18:04,188 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,188 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,188 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,188 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | job 7056890063 has completed (purged errors)
[2026-03-23 01:19:12] 2026-03-23 00:18:04,189 | INFO     | overall cleanup function is called
[2026-03-23 01:19:12] 2026-03-23 00:18:04,499 | WARNING  | process 772248 can no longer be monitored (due to stat problems) - aborting
[2026-03-23 01:19:12] 2026-03-23 00:18:04,805 | INFO     | using path: /var/lib/boinc/var/slot252/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 01:19:12] 2026-03-23 00:18:05,151 | INFO     | number of running child processes to parent process 772248: 1
[2026-03-23 01:19:12] 2026-03-23 00:18:05,151 | INFO     | maximum number of monitored processes: 6
[2026-03-23 01:19:12] 2026-03-23 00:18:05,151 | INFO     | aborting job monitoring since job object (job id=7056890063) has expired
[2026-03-23 01:19:12] 2026-03-23 00:18:05,197 | INFO     | --- collectZombieJob: --- 10, [772248]
[2026-03-23 01:19:12] 2026-03-23 00:18:05,197 | INFO     | zombie collector waiting for pid 772248
[2026-03-23 01:19:12] 2026-03-23 00:18:05,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 01:19:12] 2026-03-23 00:18:05,197 | INFO     | collected zombie processes
[2026-03-23 01:19:12] 2026-03-23 00:18:05,197 | INFO     | will attempt to kill all subprocesses of pid=772248
[2026-03-23 01:19:12] 2026-03-23 00:18:05,530 | INFO     | process IDs to be killed: [772248] (in reverse order)
[2026-03-23 01:19:12] 2026-03-23 00:18:05,678 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 01:19:12] 2026-03-23 00:18:05,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 01:19:12] 2026-03-23 00:18:05,702 | INFO     | did not find any defunct processes belonging to 772248
[2026-03-23 01:19:12] 2026-03-23 00:18:05,723 | INFO     | did not find any defunct processes belonging to 772248
[2026-03-23 01:19:12] 2026-03-23 00:18:05,724 | INFO     | ready for new job
[2026-03-23 01:19:12] 2026-03-23 00:18:05,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 01:19:12] 2026-03-23 00:18:05,725 | INFO     | **************************************
[2026-03-23 01:19:12] 2026-03-23 00:18:05,725 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 01:19:12] 2026-03-23 00:18:05,725 | INFO     | **************************************
[2026-03-23 01:19:12] 2026-03-23 00:18:05,725 | INFO     | 
[2026-03-23 01:19:12] 2026-03-23 00:18:05,730 | INFO     | architecture information:
[2026-03-23 01:19:12] 2026-03-23 00:18:05,730 | INFO     | executing command: cat /etc/os-release
[2026-03-23 01:19:12] 2026-03-23 00:18:05,741 | INFO     | cat /etc/os-release:
[2026-03-23 01:19:12] NAME="CentOS Linux"
[2026-03-23 01:19:12] VERSION="7 (Core)"
[2026-03-23 01:19:12] ID="centos"
[2026-03-23 01:19:12] ID_LIKE="rhel fedora"
[2026-03-23 01:19:12] VERSION_ID="7"
[2026-03-23 01:19:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 01:19:12] ANSI_COLOR="0;31"
[2026-03-23 01:19:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 01:19:12] HOME_URL="https://www.centos.org/"
[2026-03-23 01:19:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 01:19:12] 
[2026-03-23 01:19:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 01:19:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 01:19:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 01:19:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 01:19:12] 
[2026-03-23 01:19:12] 2026-03-23 00:18:05,741 | INFO     | **************************************
[2026-03-23 01:19:12] 2026-03-23 00:18:06,244 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/2
[2026-03-23 01:19:12] 2026-03-23 00:18:06,257 | INFO     | sufficient remaining disk space (190318641152 B)
[2026-03-23 01:19:12] 2026-03-23 00:18:06,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 01:19:12] 2026-03-23 00:18:06,257 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 01:19:12] 2026-03-23 00:18:06,257 | INFO     | update_server=False
[2026-03-23 01:19:12] 2026-03-23 00:18:06,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 01:19:12] 2026-03-23 00:18:06,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 01:19:12] 2026-03-23 00:18:06,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 01:19:12] 2026-03-23 00:18:06,258 | INFO     | aborting loop
[2026-03-23 01:19:12] 2026-03-23 00:18:06,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 01:19:12] 2026-03-23 00:18:06,881 | INFO     | all data control threads have been joined
[2026-03-23 01:19:12] 2026-03-23 00:18:07,261 | INFO     | [job] retrieve thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:07,263 | INFO     | [job] job monitor thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:07,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:07,335 | INFO     | all payload control threads have been joined
[2026-03-23 01:19:12] 2026-03-23 00:18:07,403 | INFO     | [job] validate thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:07,516 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:07,537 | INFO     | all job control threads have been joined
[2026-03-23 01:19:12] 2026-03-23 00:18:07,755 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:07,886 | INFO     | [data] control thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:08,043 | INFO     | [data] copytool_in thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:08,078 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:08,340 | INFO     | [payload] control thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:08,346 | INFO     | [payload] failed_post thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:08,542 | INFO     | [job] control thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:08,733 | INFO     | [data] copytool_out thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:08,845 | INFO     | [payload] validate_post thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:09,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 01:19:12] 2026-03-23 00:18:10,185 | INFO     | [job] queue monitor thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:10,264 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 01:19:12] 2026-03-23 00:18:33,369 | INFO     | [monitor] cgroup control has ended
[2026-03-23 01:19:12] 2026-03-23 00:18:34,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23379838494528)>', '<ExcThread(monitor, started 23379599173376)>']
[2026-03-23 01:19:12] 2026-03-23 00:18:37,650 | INFO     | PID=766412 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-23 01:19:12] 2026-03-23 00:18:37,650 | INFO     | .. there are 12 such processes running
[2026-03-23 01:19:12] 2026-03-23 00:18:37,650 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 01:19:12] 2026-03-23 00:18:37,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 01:19:12] 2026-03-23 00:18:37,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 01:19:12] 2026-03-23 00:18:37,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 01:19:12] 2026-03-23 00:18:37,651 | INFO     | [monitor] control thread has ended
[2026-03-23 01:19:12] 2026-03-23 00:18:39,672 | INFO     | all workflow threads have been joined
[2026-03-23 01:19:12] 2026-03-23 00:18:39,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 01:19:12] 2026-03-23 00:18:39,672 | INFO     | traces error code: 0
[2026-03-23 01:19:12] 2026-03-23 00:18:39,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 01:19:12] 2026-03-23 00:18:39,779 [wrapper] ==== pilot stdout END ====
[2026-03-23 01:19:12] 2026-03-23 00:18:39,782 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 01:19:12] 2026-03-23 00:18:39,784 [wrapper] pilotpid: 766412
[2026-03-23 01:19:12] 2026-03-23 00:18:39,786 [wrapper] Pilot exit status: 0
[2026-03-23 01:19:12] 2026-03-23 00:18:39,793 [wrapper] pandaids: 7056890063
[2026-03-23 01:19:12] 2026-03-23 00:18:39,893 [wrapper] cleanup supervisor_pilot 1014815 766413
[2026-03-23 01:19:12] 2026-03-23 00:18:39,895 [wrapper] Test setup, not cleaning
[2026-03-23 01:19:12] 2026-03-23 00:18:39,898 [wrapper] apfmon messages muted
[2026-03-23 01:19:12] 2026-03-23 00:18:39,899 [wrapper] ==== wrapper stdout END ====
[2026-03-23 01:19:12] 2026-03-23 00:18:39,901 [wrapper] ==== wrapper stderr END ====
[2026-03-23 01:19:12]  *** Error codes and diagnostics ***
[2026-03-23 01:19:12]     "exeErrorCode": 0,
[2026-03-23 01:19:12]     "exeErrorDiag": "",
[2026-03-23 01:19:12]     "pilotErrorCode": 0,
[2026-03-23 01:19:12]     "pilotErrorDiag": "",
[2026-03-23 01:19:12]  *** Listing of results directory ***
[2026-03-23 01:19:12] total 464312
[2026-03-23 01:19:12] -rwx------. 1 boinc boinc     36322 Mar 22 15:08 runpilot2-wrapper.sh
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc    585013 Mar 22 16:23 pilot3.tar.gz
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc      5111 Mar 22 16:35 queuedata.json
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc       100 Mar 23 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 01:19:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 00:05 run_atlas
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc       105 Mar 23 00:05 job.xml
[2026-03-23 01:19:12] -rw-r--r--. 2 boinc boinc 239218776 Mar 23 00:05 EVNT.49132934._000001.pool.root.1
[2026-03-23 01:19:12] -rw-r--r--. 2 boinc boinc     15845 Mar 23 00:05 start_atlas.sh
[2026-03-23 01:19:12] drwxrwx--x. 2 boinc boinc      4096 Mar 23 00:05 shared
[2026-03-23 01:19:12] -rw-r--r--. 2 boinc boinc    597546 Mar 23 00:05 input.tar.gz
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc      6711 Mar 23 00:05 init_data.xml
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc         0 Mar 23 00:05 boinc_lockfile
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc      2600 Mar 23 00:05 pandaJob.out
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc   1010671 Mar 23 00:05 agis_schedconf.cvmfs.json
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc   1511579 Mar 23 00:05 agis_ddmendpoints.agis.ALL.json
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc       445 Mar 23 00:05 workernode_map.json
[2026-03-23 01:19:12] drwx------. 5 boinc boinc      4096 Mar 23 00:05 pilot3
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc 230217746 Mar 23 01:17 HITS.49176186._000015.pool.root.1
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc       529 Mar 23 01:17 boinc_task_state.xml
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc      1029 Mar 23 01:17 memory_monitor_summary.json
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc        95 Mar 23 01:18 pilot_heartbeat.json
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc    386083 Mar 23 01:18 log.49176186._000015.job.log.tgz.1
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc      6347 Mar 23 01:18 heartbeat.json
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc      4830 Mar 23 01:18 pilotlog.txt
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc    649254 Mar 23 01:18 log.49176186._000015.job.log.1
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc       357 Mar 23 01:18 output.list
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc       620 Mar 23 01:18 runtime_log
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc   1054720 Mar 23 01:18 result.tar.gz
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc      9223 Mar 23 01:18 runtime_log.err
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc       663 Mar 23 01:18 GWYMDmFfYO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEN3LDm0IrPfm.diag
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc        27 Mar 23 01:19 wrapper_checkpoint.txt
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc      8192 Mar 23 01:19 boinc_mmap_file
[2026-03-23 01:19:12] -rw-r--r--. 1 boinc boinc     21310 Mar 23 01:19 stderr.txt
[2026-03-23 01:19:12] HITS file was successfully produced:
[2026-03-23 01:19:12] -rw-------. 1 boinc boinc 230217746 Mar 23 01:17 shared/HITS.pool.root.1
[2026-03-23 01:19:12]  *** Contents of shared directory: ***
[2026-03-23 01:19:13] total 460080
[2026-03-23 01:19:13] -rw-r--r--. 2 boinc boinc 239218776 Mar 23 00:05 ATLAS.root_0
[2026-03-23 01:19:13] -rw-r--r--. 2 boinc boinc     15845 Mar 23 00:05 start_atlas.sh
[2026-03-23 01:19:13] -rw-r--r--. 2 boinc boinc    597546 Mar 23 00:05 input.tar.gz
[2026-03-23 01:19:13] -rw-------. 1 boinc boinc 230217746 Mar 23 01:17 HITS.pool.root.1
[2026-03-23 01:19:13] -rw-------. 1 boinc boinc   1054720 Mar 23 01:18 result.tar.gz
01:19:14 (761506): run_atlas exited; CPU time 47599.817522
01:19:14 (761506): called boinc_finish(0)

</stderr_txt>
]]>

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