Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:49:03 (3754245): wrapper (7.7.26015): starting
10:49:03 (3754245): wrapper: running run_atlas (--nthreads 12)
[2026-03-23 10:49:03] Arguments: --nthreads 12
[2026-03-23 10:49:03] Threads: 12
[2026-03-23 10:49:03] Checking for CVMFS
[2026-03-23 10:49:03] No cvmfs_config command found, will try listing directly
[2026-03-23 10:49:03] CVMFS is ok
[2026-03-23 10:49:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 10:49:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 10:49:03] Further information can be found at the LHC@home message board.
[2026-03-23 10:49:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 10:49:03] Checking for apptainer binary...
[2026-03-23 10:49:03] which: no apptainer in ((null))
[2026-03-23 10:49:03] apptainer is not installed, using version from CVMFS
[2026-03-23 10:49:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 10:49:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-23 10:49:03] apptainer works
[2026-03-23 10:49:03] Set ATHENA_PROC_NUMBER=12
[2026-03-23 10:49:03] Set ATHENA_CORE_NUMBER=12
[2026-03-23 10:49:03] Starting ATLAS job with PandaID=7056948423
[2026-03-23 10:49:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 11:55:27]  *** The last 200 lines of the pilot log: ***
[2026-03-23 11:55:27]  lfn=log.49179087._000003.job.log.tgz.1
[2026-03-23 11:55:27]  mtime=0
[2026-03-23 11:55:27]  protocol_id=None
[2026-03-23 11:55:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-23 11:55:27]  replicas=None
[2026-03-23 11:55:27]  scope=mc23_13p6TeV
[2026-03-23 11:55:27]  status=None
[2026-03-23 11:55:27]  status_code=0
[2026-03-23 11:55:27]  storage_token=
[2026-03-23 11:55:27]  surl=/var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056948423/log.49179087._000003.job.log.tgz.1
[2026-03-23 11:55:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/c3/log.49179087._000003.job.log.tgz.1
[2026-03-23 11:55:27]  workdir=None
[2026-03-23 11:55:27] ]
[2026-03-23 11:55:27] 2026-03-23 10:54:37,243 | INFO     | transferring file log.49179087._000003.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056948423/log.49179087._000003.job.log.tgz.1 to /var/lib/
[2026-03-23 11:55:27] 2026-03-23 10:54:37,243 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056948423/log.49179087._000003.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/2/
[2026-03-23 11:55:27] 2026-03-23 10:54:37,259 | INFO     | adding to output.list: log.49179087._000003.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/c3/log.49179087._000003.job.log.tg
[2026-03-23 11:55:27] 2026-03-23 10:54:37,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-23 11:55:27] 2026-03-23 10:54:37,259 | INFO     | summary of transferred files:
[2026-03-23 11:55:27] 2026-03-23 10:54:37,259 | INFO     |  -- lfn=log.49179087._000003.job.log.tgz.1, status_code=0, status=transferred
[2026-03-23 11:55:27] 2026-03-23 10:54:37,259 | INFO     | stage-out finished correctly
[2026-03-23 11:55:27] 2026-03-23 10:54:37,501 | INFO     | time since job start (3922s) is within the limit (345600.0s)
[2026-03-23 11:55:27] 2026-03-23 10:54:38,130 | WARNING  | process 3764739 can no longer be monitored (due to stat problems) - aborting
[2026-03-23 11:55:27] 2026-03-23 10:54:38,130 | INFO     | using path: /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056948423/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 11:55:27] 2026-03-23 10:54:38,502 | INFO     | number of running child processes to parent process 3764739: 1
[2026-03-23 11:55:27] 2026-03-23 10:54:38,503 | INFO     | maximum number of monitored processes: 6
[2026-03-23 11:55:27] 2026-03-23 10:54:39,506 | INFO     | time since job start (3924s) is within the limit (345600.0s)
[2026-03-23 11:55:27] 2026-03-23 10:54:40,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-23 11:55:27] 2026-03-23 10:54:40,592 | INFO     | job 7056948423 has state=finished
[2026-03-23 11:55:27] 2026-03-23 10:54:40,592 | INFO     | preparing for final server update for job 7056948423 in state='finished'
[2026-03-23 11:55:27] 2026-03-23 10:54:40,592 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056948423/jobReport.json
[2026-03-23 11:55:27] 2026-03-23 10:54:40,593 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/2/workernode_map.json
[2026-03-23 11:55:27] 2026-03-23 10:54:40,594 | INFO     | this job has now completed (state=finished)
[2026-03-23 11:55:27] 2026-03-23 10:54:40,594 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 11:55:27] 2026-03-23 10:54:40,594 | INFO     | log transfer has been attempted: DONE
[2026-03-23 11:55:27] 2026-03-23 10:54:40,594 | INFO     | job 7056948423 has finished - writing final server update
[2026-03-23 11:55:27] 2026-03-23 10:54:40,594 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1556433/.job.ad'
[2026-03-23 11:55:27] 2026-03-23 10:54:40,594 | INFO     | total number of processed events: 400 (read)
[2026-03-23 11:55:27] 2026-03-23 10:54:40,612 | INFO     | using path: /var/lib/boinc/var/slot252/slots/2/PanDA_Pilot-7056948423/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 11:55:27] 2026-03-23 10:54:40,612 | INFO     | extracted standard info from prmon json
[2026-03-23 11:55:27] 2026-03-23 10:54:40,612 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 11:55:27] 2026-03-23 10:54:40,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 11:55:27] 2026-03-23 10:54:40,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 11:55:27] 2026-03-23 10:54:40,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | fitting pss+swap vs Time
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | sum of square deviations: 57407588.0
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | sum of deviations: 232677607.0
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | mean x: 1774261389.0
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | mean y: 2716094.0
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | intersect: -7188509117.987937
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | chi2: 0.0015254085445760921
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | current memory leak: 4.05 B/s (using 57 data points, chi2=0.00)
[2026-03-23 11:55:27] 2026-03-23 10:54:40,614 | INFO     | could have reported an average CPU frequency of 3570 MHz (6 samples)
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | ..............................
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . Timing measurements:
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . get job = 0 s
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . initial setup = 4 s
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . payload setup = 6 s
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . stage-in = 0 s
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . payload execution = 3900 s
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . stage-out = 0 s
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | . log creation = 0 s
[2026-03-23 11:55:27] 2026-03-23 10:54:40,615 | INFO     | ..............................
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | 
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | job summary report
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | --------------------------------------------------
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | PanDA job id: 7056948423
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | task id: 49179087
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | errors: (none)
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | pilot state: finished 
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | transexitcode: 0
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | exeerrorcode: 0
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | exeerrordiag: 
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | exitcode: 0
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | exitmsg: OK
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | cpuconsumptiontime: 42566 s
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | nevents: 400
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | neventsw: 0
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | pid: 3764739
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | pgrp: 3764739
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | corecount: 12
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | event service: False
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | sizes: {0: 2280384, 11: 2280384, 3910: 2306284, 3911: 2315306, 3914: 2315556}
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | --------------------------------------------------
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | 
[2026-03-23 11:55:27] 2026-03-23 10:54:41,045 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/2
[2026-03-23 11:55:27] 2026-03-23 10:54:41,064 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,064 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,064 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | job 7056948423 has completed (purged errors)
[2026-03-23 11:55:27] 2026-03-23 10:54:41,065 | INFO     | overall cleanup function is called
[2026-03-23 11:55:27] 2026-03-23 10:54:42,073 | INFO     | --- collectZombieJob: --- 10, [3764739]
[2026-03-23 11:55:27] 2026-03-23 10:54:42,073 | INFO     | zombie collector waiting for pid 3764739
[2026-03-23 11:55:27] 2026-03-23 10:54:42,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 11:55:27] 2026-03-23 10:54:42,073 | INFO     | collected zombie processes
[2026-03-23 11:55:27] 2026-03-23 10:54:42,073 | INFO     | will attempt to kill all subprocesses of pid=3764739
[2026-03-23 11:55:27] 2026-03-23 10:54:42,445 | INFO     | process IDs to be killed: [3764739] (in reverse order)
[2026-03-23 11:55:27] 2026-03-23 10:54:42,603 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 11:55:27] 2026-03-23 10:54:42,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 11:55:27] 2026-03-23 10:54:42,629 | INFO     | did not find any defunct processes belonging to 3764739
[2026-03-23 11:55:27] 2026-03-23 10:54:42,652 | INFO     | did not find any defunct processes belonging to 3764739
[2026-03-23 11:55:27] 2026-03-23 10:54:42,652 | INFO     | ready for new job
[2026-03-23 11:55:27] 2026-03-23 10:54:42,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 11:55:27] 2026-03-23 10:54:42,654 | INFO     | **************************************
[2026-03-23 11:55:27] 2026-03-23 10:54:42,654 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 11:55:27] 2026-03-23 10:54:42,654 | INFO     | **************************************
[2026-03-23 11:55:27] 2026-03-23 10:54:42,654 | INFO     | 
[2026-03-23 11:55:27] 2026-03-23 10:54:42,660 | INFO     | architecture information:
[2026-03-23 11:55:27] 2026-03-23 10:54:42,660 | INFO     | executing command: cat /etc/os-release
[2026-03-23 11:55:27] 2026-03-23 10:54:42,673 | INFO     | cat /etc/os-release:
[2026-03-23 11:55:27] NAME="CentOS Linux"
[2026-03-23 11:55:27] VERSION="7 (Core)"
[2026-03-23 11:55:27] ID="centos"
[2026-03-23 11:55:27] ID_LIKE="rhel fedora"
[2026-03-23 11:55:27] VERSION_ID="7"
[2026-03-23 11:55:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 11:55:27] ANSI_COLOR="0;31"
[2026-03-23 11:55:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 11:55:27] HOME_URL="https://www.centos.org/"
[2026-03-23 11:55:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 11:55:27] 
[2026-03-23 11:55:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 11:55:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 11:55:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 11:55:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 11:55:27] 
[2026-03-23 11:55:27] 2026-03-23 10:54:42,674 | INFO     | **************************************
[2026-03-23 11:55:27] 2026-03-23 10:54:43,176 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/2
[2026-03-23 11:55:27] 2026-03-23 10:54:43,191 | INFO     | sufficient remaining disk space (176756359168 B)
[2026-03-23 11:55:27] 2026-03-23 10:54:43,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 11:55:27] 2026-03-23 10:54:43,191 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 11:55:27] 2026-03-23 10:54:43,191 | INFO     | update_server=False
[2026-03-23 11:55:27] 2026-03-23 10:54:43,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 11:55:27] 2026-03-23 10:54:43,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 11:55:27] 2026-03-23 10:54:43,507 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-23 11:55:27] 2026-03-23 10:54:43,507 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-23 11:55:27] 2026-03-23 10:54:43,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 11:55:27] 2026-03-23 10:54:43,507 | INFO     | will abort loop
[2026-03-23 11:55:27] 2026-03-23 10:54:43,515 | INFO     | all data control threads have been joined
[2026-03-23 11:55:27] 2026-03-23 10:54:43,872 | INFO     | all payload control threads have been joined
[2026-03-23 11:55:27] 2026-03-23 10:54:44,196 | INFO     | [job] retrieve thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:44,512 | INFO     | [job] job monitor thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:44,520 | INFO     | [data] control thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:44,774 | INFO     | [payload] failed_post thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:44,781 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:44,877 | INFO     | [payload] control thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:44,881 | INFO     | all job control threads have been joined
[2026-03-23 11:55:27] 2026-03-23 10:54:45,129 | INFO     | [job] validate thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:45,197 | INFO     | [data] copytool_out thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:45,249 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:45,262 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:45,365 | INFO     | [payload] validate_post thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:45,453 | INFO     | [data] copytool_in thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:45,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 11:55:27] 2026-03-23 10:54:45,886 | INFO     | [job] control thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:46,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 11:55:27] 2026-03-23 10:54:46,671 | INFO     | [job] queue monitor thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:50,603 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:54:53,882 | INFO     | job.realtimelogging is not enabled
[2026-03-23 11:55:27] 2026-03-23 10:54:54,887 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 11:55:27] 2026-03-23 10:55:13,079 | INFO     | PID=3758835 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-23 11:55:27] 2026-03-23 10:55:13,079 | INFO     | .. there are 16 such processes running
[2026-03-23 11:55:27] 2026-03-23 10:55:13,079 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 11:55:27] 2026-03-23 10:55:13,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 11:55:27] 2026-03-23 10:55:13,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 11:55:27] 2026-03-23 10:55:20,792 | INFO     | [monitor] cgroup control has ended
[2026-03-23 11:55:27] 2026-03-23 10:55:22,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23346843883328)>', '<ExcThread(monitor, started 23346592073472)>']
[2026-03-23 11:55:27] 2026-03-23 10:55:23,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 11:55:27] 2026-03-23 10:55:23,129 | INFO     | [monitor] control thread has ended
[2026-03-23 11:55:27] 2026-03-23 10:55:27,328 | INFO     | all workflow threads have been joined
[2026-03-23 11:55:27] 2026-03-23 10:55:27,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 11:55:27] 2026-03-23 10:55:27,328 | INFO     | traces error code: 0
[2026-03-23 11:55:27] 2026-03-23 10:55:27,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 11:55:27] 2026-03-23 10:55:27,570 [wrapper] ==== pilot stdout END ====
[2026-03-23 11:55:27] 2026-03-23 10:55:27,573 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 11:55:27] 2026-03-23 10:55:27,575 [wrapper] pilotpid: 3758835
[2026-03-23 11:55:27] 2026-03-23 10:55:27,577 [wrapper] Pilot exit status: 0
[2026-03-23 11:55:27] 2026-03-23 10:55:27,586 [wrapper] pandaids: 7056948423
[2026-03-23 11:55:27] 2026-03-23 10:55:27,694 [wrapper] cleanup supervisor_pilot 4053937 3758836
[2026-03-23 11:55:27] 2026-03-23 10:55:27,697 [wrapper] Test setup, not cleaning
[2026-03-23 11:55:27] 2026-03-23 10:55:27,700 [wrapper] apfmon messages muted
[2026-03-23 11:55:27] 2026-03-23 10:55:27,702 [wrapper] ==== wrapper stdout END ====
[2026-03-23 11:55:27] 2026-03-23 10:55:27,705 [wrapper] ==== wrapper stderr END ====
[2026-03-23 11:55:27]  *** Error codes and diagnostics ***
[2026-03-23 11:55:27]     "exeErrorCode": 0,
[2026-03-23 11:55:27]     "exeErrorDiag": "",
[2026-03-23 11:55:27]     "pilotErrorCode": 0,
[2026-03-23 11:55:27]     "pilotErrorDiag": "",
[2026-03-23 11:55:27]  *** Listing of results directory ***
[2026-03-23 11:55:27] total 465720
[2026-03-23 11:55:27] -rwx------. 1 boinc boinc     36322 Mar 22 15:12 runpilot2-wrapper.sh
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc    585013 Mar 22 16:46 pilot3.tar.gz
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc      5111 Mar 22 17:15 queuedata.json
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc       100 Mar 23 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 11:55:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 10:48 run_atlas
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc       105 Mar 23 10:48 job.xml
[2026-03-23 11:55:27] -rw-r--r--. 2 boinc boinc 243082616 Mar 23 10:49 EVNT.49130588._000001.pool.root.1
[2026-03-23 11:55:27] -rw-r--r--. 2 boinc boinc     15845 Mar 23 10:49 start_atlas.sh
[2026-03-23 11:55:27] drwxrwx--x. 2 boinc boinc      4096 Mar 23 10:49 shared
[2026-03-23 11:55:27] -rw-r--r--. 2 boinc boinc    597558 Mar 23 10:49 input.tar.gz
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc      6711 Mar 23 10:49 init_data.xml
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc         0 Mar 23 10:49 boinc_lockfile
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc      2690 Mar 23 10:49 pandaJob.out
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc   1010858 Mar 23 10:49 agis_schedconf.cvmfs.json
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc   1511579 Mar 23 10:49 agis_ddmendpoints.agis.ALL.json
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc       443 Mar 23 10:49 workernode_map.json
[2026-03-23 11:55:27] drwx------. 5 boinc boinc      4096 Mar 23 10:49 pilot3
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc 227955015 Mar 23 11:54 HITS.49179087._000003.pool.root.1
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc       529 Mar 23 11:54 boinc_task_state.xml
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc      1030 Mar 23 11:54 memory_monitor_summary.json
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc    366755 Mar 23 11:54 log.49179087._000003.job.log.tgz.1
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc        95 Mar 23 11:54 pilot_heartbeat.json
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc      6339 Mar 23 11:54 heartbeat.json
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc      8192 Mar 23 11:55 boinc_mmap_file
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc        27 Mar 23 11:55 wrapper_checkpoint.txt
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc      5089 Mar 23 11:55 pilotlog.txt
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc    592271 Mar 23 11:55 log.49179087._000003.job.log.1
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc       357 Mar 23 11:55 output.list
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc       620 Mar 23 11:55 runtime_log
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc    972800 Mar 23 11:55 result.tar.gz
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc       663 Mar 23 11:55 t76LDmqiYO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7t3LDmaudjXn.diag
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc      9223 Mar 23 11:55 runtime_log.err
[2026-03-23 11:55:27] -rw-r--r--. 1 boinc boinc     21502 Mar 23 11:55 stderr.txt
[2026-03-23 11:55:27] HITS file was successfully produced:
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc 227955015 Mar 23 11:54 shared/HITS.pool.root.1
[2026-03-23 11:55:27]  *** Contents of shared directory: ***
[2026-03-23 11:55:27] total 461564
[2026-03-23 11:55:27] -rw-r--r--. 2 boinc boinc 243082616 Mar 23 10:49 ATLAS.root_0
[2026-03-23 11:55:27] -rw-r--r--. 2 boinc boinc     15845 Mar 23 10:49 start_atlas.sh
[2026-03-23 11:55:27] -rw-r--r--. 2 boinc boinc    597558 Mar 23 10:49 input.tar.gz
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc 227955015 Mar 23 11:54 HITS.pool.root.1
[2026-03-23 11:55:27] -rw-------. 1 boinc boinc    972800 Mar 23 11:55 result.tar.gz
11:55:28 (3754245): run_atlas exited; CPU time 42691.522876
11:55:28 (3754245): called boinc_finish(0)

</stderr_txt>
]]>

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