Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:16:53 (335847): wrapper (7.7.26015): starting
05:16:53 (335847): wrapper: running run_atlas (--nthreads 12)
[2026-03-23 05:16:53] Arguments: --nthreads 12
[2026-03-23 05:16:53] Threads: 12
[2026-03-23 05:16:53] Checking for CVMFS
[2026-03-23 05:16:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 05:16:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 05:16:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 05:16:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 05:16:55] 2.13.3.0 309227 94 46288 157585 1 50 2819210 4096001 923 130560 0 111183 99.984 5567 1068 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-23 05:16:55] CVMFS is ok
[2026-03-23 05:16:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 05:16:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-23 05:16:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-23 05:16:55] Further information can be found at the LHC@home message board.
[2026-03-23 05:16:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 05:16:55] Checking for apptainer binary...
[2026-03-23 05:16:55] apptainer is not installed, using version from CVMFS
[2026-03-23 05:16:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 05:16:55] dc
[2026-03-23 05:16:55] apptainer works
[2026-03-23 05:16:55] Set ATHENA_PROC_NUMBER=12
[2026-03-23 05:16:55] Set ATHENA_CORE_NUMBER=12
[2026-03-23 05:16:55] Starting ATLAS job with PandaID=7056950244
[2026-03-23 05:16:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 06:19:36]  *** The last 200 lines of the pilot log: ***
[2026-03-23 06:19:36]  guid=ee6dcc37-879e-4456-a56e-29a08dfab1fd
[2026-03-23 06:19:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-23 06:19:36]  is_altstaged=None
[2026-03-23 06:19:36]  is_tar=False
[2026-03-23 06:19:36]  lfn=log.49176543._000034.job.log.tgz.1
[2026-03-23 06:19:36]  mtime=0
[2026-03-23 06:19:36]  protocol_id=None
[2026-03-23 06:19:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-23 06:19:36]  replicas=None
[2026-03-23 06:19:36]  scope=mc23_13p6TeV
[2026-03-23 06:19:36]  status=None
[2026-03-23 06:19:36]  status_code=0
[2026-03-23 06:19:36]  storage_token=
[2026-03-23 06:19:36]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-7056950244/log.49176543._000034.job.log.tgz.1
[2026-03-23 06:19:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/56/log.49176543._000034.job.log.tgz.1
[2026-03-23 06:19:36]  workdir=None
[2026-03-23 06:19:36] ]
[2026-03-23 06:19:36] 2026-03-22 19:18:38,085 | INFO     | transferring file log.49176543._000034.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-7056950244/log.49176543._000034.job.log.tgz.1 to /var/lib/boinc
[2026-03-23 06:19:36] 2026-03-22 19:18:38,085 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-7056950244/log.49176543._000034.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.491765
[2026-03-23 06:19:36] 2026-03-22 19:18:38,097 | INFO     | adding to output.list: log.49176543._000034.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/56/log.49176543._000034.job.log.tg
[2026-03-23 06:19:36] 2026-03-22 19:18:38,097 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-23 06:19:36] 2026-03-22 19:18:38,097 | INFO     | summary of transferred files:
[2026-03-23 06:19:36] 2026-03-22 19:18:38,097 | INFO     |  -- lfn=log.49176543._000034.job.log.tgz.1, status_code=0, status=transferred
[2026-03-23 06:19:36] 2026-03-22 19:18:38,097 | INFO     | stage-out finished correctly
[2026-03-23 06:19:36] 2026-03-22 19:18:38,128 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-23 06:19:36] 2026-03-22 19:18:38,186 | INFO     | time since job start (3673s) is within the limit (345600.0s)
[2026-03-23 06:19:36] 2026-03-22 19:18:39,192 | INFO     | monitor loop #282: job 0:7056950244 is in state 'finished'
[2026-03-23 06:19:36] 2026-03-22 19:18:39,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-23 06:19:36] 2026-03-22 19:18:40,192 | INFO     | time since job start (3675s) is within the limit (345600.0s)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,071 | INFO     | job 7056950244 has state=finished
[2026-03-23 06:19:36] 2026-03-22 19:18:41,071 | INFO     | preparing for final server update for job 7056950244 in state='finished'
[2026-03-23 06:19:36] 2026-03-22 19:18:41,071 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7056950244/jobReport.json
[2026-03-23 06:19:36] 2026-03-22 19:18:41,072 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-23 06:19:36] 2026-03-22 19:18:41,072 | INFO     | this job has now completed (state=finished)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,072 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,072 | INFO     | log transfer has been attempted: DONE
[2026-03-23 06:19:36] 2026-03-22 19:18:41,073 | INFO     | job 7056950244 has finished - writing final server update
[2026-03-23 06:19:36] 2026-03-22 19:18:41,073 | INFO     | total number of processed events: 400 (read)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,074 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7056950244/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,075 | INFO     | extracted standard info from prmon json
[2026-03-23 06:19:36] 2026-03-22 19:18:41,075 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 06:19:36] 2026-03-22 19:18:41,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 06:19:36] 2026-03-22 19:18:41,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 06:19:36] 2026-03-22 19:18:41,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 06:19:36] 2026-03-22 19:18:41,075 | INFO     | fitting pss+swap vs Time
[2026-03-23 06:19:36] 2026-03-22 19:18:41,075 | INFO     | sum of square deviations: 46147842.0
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | sum of deviations: 498451679.0000001
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | mean x: 1774205357.0
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | mean y: 2765912.603773585
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | intersect: -19160765918.14672
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | chi2: 0.001256988140102343
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | current memory leak: 10.80 B/s (using 53 data points, chi2=0.00)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | could have reported an average CPU frequency of 3393 MHz (6 samples)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | ..............................
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . Timing measurements:
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . get job = 0 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . initial setup = 7 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . payload setup = 6 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . stage-in = 0 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . payload execution = 3650 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . stage-out = 0 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | . log creation = 0 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,076 | INFO     | ..............................
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | 
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | job summary report
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | --------------------------------------------------
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | PanDA job id: 7056950244
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | task id: 49176543
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | errors: (none)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | pilot state: finished 
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | transexitcode: 0
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | exeerrorcode: 0
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | exeerrordiag: 
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | exitcode: 0
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | exitmsg: OK
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | cpuconsumptiontime: 39825 s
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | nevents: 400
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | neventsw: 0
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | pid: 344502
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | pgrp: 344502
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | corecount: 12
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | event service: False
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | sizes: {0: 2280324, 11: 2280324, 3660: 2306161, 3661: 2315229, 3664: 2315367}
[2026-03-23 06:19:36] 2026-03-22 19:18:41,107 | INFO     | --------------------------------------------------
[2026-03-23 06:19:36] 2026-03-22 19:18:41,108 | INFO     | 
[2026-03-23 06:19:36] 2026-03-22 19:18:41,108 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-23 06:19:36] 2026-03-22 19:18:41,122 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,122 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,122 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,122 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | job 7056950244 has completed (purged errors)
[2026-03-23 06:19:36] 2026-03-22 19:18:41,123 | INFO     | overall cleanup function is called
[2026-03-23 06:19:36] 2026-03-22 19:18:42,130 | INFO     | --- collectZombieJob: --- 10, [344502]
[2026-03-23 06:19:36] 2026-03-22 19:18:42,130 | INFO     | zombie collector waiting for pid 344502
[2026-03-23 06:19:36] 2026-03-22 19:18:42,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 06:19:36] 2026-03-22 19:18:42,130 | INFO     | collected zombie processes
[2026-03-23 06:19:36] 2026-03-22 19:18:42,131 | INFO     | will attempt to kill all subprocesses of pid=344502
[2026-03-23 06:19:36] 2026-03-22 19:18:42,178 | INFO     | process IDs to be killed: [344502] (in reverse order)
[2026-03-23 06:19:36] 2026-03-22 19:18:42,214 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 06:19:36] 2026-03-22 19:18:42,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 06:19:36] 2026-03-22 19:18:42,216 | INFO     | did not find any defunct processes belonging to 344502
[2026-03-23 06:19:36] 2026-03-22 19:18:42,218 | INFO     | did not find any defunct processes belonging to 344502
[2026-03-23 06:19:36] 2026-03-22 19:18:42,218 | INFO     | ready for new job
[2026-03-23 06:19:36] 2026-03-22 19:18:42,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 06:19:36] 2026-03-22 19:18:42,219 | INFO     | **************************************
[2026-03-23 06:19:36] 2026-03-22 19:18:42,219 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 06:19:36] 2026-03-22 19:18:42,219 | INFO     | **************************************
[2026-03-23 06:19:36] 2026-03-22 19:18:42,219 | INFO     | 
[2026-03-23 06:19:36] 2026-03-22 19:18:42,220 | INFO     | pilot is running in a VM
[2026-03-23 06:19:36] 2026-03-22 19:18:42,220 | INFO     | architecture information:
[2026-03-23 06:19:36] 2026-03-22 19:18:42,220 | INFO     | executing command: cat /etc/os-release
[2026-03-23 06:19:36] 2026-03-22 19:18:42,229 | INFO     | cat /etc/os-release:
[2026-03-23 06:19:36] NAME="CentOS Linux"
[2026-03-23 06:19:36] VERSION="7 (Core)"
[2026-03-23 06:19:36] ID="centos"
[2026-03-23 06:19:36] ID_LIKE="rhel fedora"
[2026-03-23 06:19:36] VERSION_ID="7"
[2026-03-23 06:19:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 06:19:36] ANSI_COLOR="0;31"
[2026-03-23 06:19:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 06:19:36] HOME_URL="https://www.centos.org/"
[2026-03-23 06:19:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 06:19:36] 
[2026-03-23 06:19:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 06:19:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 06:19:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 06:19:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 06:19:36] 
[2026-03-23 06:19:36] 2026-03-22 19:18:42,229 | INFO     | **************************************
[2026-03-23 06:19:36] 2026-03-22 19:18:42,732 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-23 06:19:36] 2026-03-22 19:18:42,745 | INFO     | sufficient remaining disk space (173587562496 B)
[2026-03-23 06:19:36] 2026-03-22 19:18:42,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 06:19:36] 2026-03-22 19:18:42,745 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 06:19:36] 2026-03-22 19:18:42,745 | INFO     | update_server=False
[2026-03-23 06:19:36] 2026-03-22 19:18:42,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 06:19:36] 2026-03-22 19:18:42,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 06:19:36] 2026-03-22 19:18:42,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 06:19:36] 2026-03-22 19:18:42,746 | INFO     | aborting loop
[2026-03-23 06:19:36] 2026-03-22 19:18:43,177 | INFO     | all data control threads have been joined
[2026-03-23 06:19:36] 2026-03-22 19:18:43,483 | INFO     | all job control threads have been joined
[2026-03-23 06:19:36] 2026-03-22 19:18:43,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 06:19:36] 2026-03-22 19:18:43,750 | INFO     | [job] retrieve thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:43,751 | INFO     | [job] queue monitor thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:43,751 | INFO     | [job] job monitor thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:43,913 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:43,972 | INFO     | [payload] failed_post thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:43,979 | INFO     | all payload control threads have been joined
[2026-03-23 06:19:36] 2026-03-22 19:18:44,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 06:19:36] 2026-03-22 19:18:44,183 | INFO     | [data] control thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:44,438 | INFO     | [job] validate thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:44,477 | INFO     | [payload] validate_post thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:44,488 | INFO     | [job] control thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:44,543 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:44,579 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:44,790 | INFO     | [data] copytool_in thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:44,985 | INFO     | [payload] control thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:45,642 | INFO     | [data] copytool_out thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:48,168 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:18:53,446 | INFO     | job.realtimelogging is not enabled
[2026-03-23 06:19:36] 2026-03-22 19:18:54,448 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 06:19:36] 2026-03-22 19:19:13,333 | INFO     | PID=339984 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-23 06:19:36] 2026-03-22 19:19:13,333 | INFO     | .. there are 2 such processes running
[2026-03-23 06:19:36] 2026-03-22 19:19:13,333 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 06:19:36] 2026-03-22 19:19:13,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 06:19:36] 2026-03-22 19:19:13,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 06:19:36] 2026-03-22 19:19:31,254 | INFO     | [monitor] cgroup control has ended
[2026-03-23 06:19:36] 2026-03-22 19:19:31,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129234883917632)>', '<ExcThread(monitor, started 129234206971648)>']
[2026-03-23 06:19:36] 2026-03-22 19:19:32,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 06:19:36] 2026-03-22 19:19:32,430 | INFO     | [monitor] control thread has ended
[2026-03-23 06:19:36] 2026-03-22 19:19:36,498 | INFO     | all workflow threads have been joined
[2026-03-23 06:19:36] 2026-03-22 19:19:36,498 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 06:19:36] 2026-03-22 19:19:36,498 | INFO     | traces error code: 0
[2026-03-23 06:19:36] 2026-03-22 19:19:36,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 06:19:36] 2026-03-22 19:19:36,564 [wrapper] ==== pilot stdout END ====
[2026-03-23 06:19:36] 2026-03-22 19:19:36,566 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 06:19:36] 2026-03-22 19:19:36,568 [wrapper] pilotpid: 339984
[2026-03-23 06:19:36] 2026-03-22 19:19:36,569 [wrapper] Pilot exit status: 0
[2026-03-23 06:19:36] 2026-03-22 19:19:36,575 [wrapper] pandaids: 7056950244
[2026-03-23 06:19:36] 2026-03-22 19:19:36,596 [wrapper] cleanup supervisor_pilot  362261 339985
[2026-03-23 06:19:36] 2026-03-22 19:19:36,597 [wrapper] Test setup, not cleaning
[2026-03-23 06:19:36] 2026-03-22 19:19:36,599 [wrapper] apfmon messages muted
[2026-03-23 06:19:36] 2026-03-22 19:19:36,601 [wrapper] ==== wrapper stdout END ====
[2026-03-23 06:19:36] 2026-03-22 19:19:36,603 [wrapper] ==== wrapper stderr END ====
[2026-03-23 06:19:36]  *** Error codes and diagnostics ***
[2026-03-23 06:19:36]     "exeErrorCode": 0,
[2026-03-23 06:19:36]     "exeErrorDiag": "",
[2026-03-23 06:19:36]     "pilotErrorCode": 0,
[2026-03-23 06:19:36]     "pilotErrorDiag": "",
[2026-03-23 06:19:36]  *** Listing of results directory ***
[2026-03-23 06:19:36] total 426796
[2026-03-23 06:19:36] -rwx------ 1 boinc boinc     36322 Mar 23 01:13 runpilot2-wrapper.sh
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc      5111 Mar 23 03:18 queuedata.json
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc    585013 Mar 23 03:19 pilot3.tar.gz
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc       100 Mar 23 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 06:19:36] -rwxr-xr-x 1 boinc boinc      7986 Mar 23 05:16 run_atlas
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc       105 Mar 23 05:16 job.xml
[2026-03-23 06:19:36] -rw-r--r-- 2 boinc boinc 228101828 Mar 23 05:16 EVNT.49134319._000002.pool.root.1
[2026-03-23 06:19:36] -rw-r--r-- 2 boinc boinc    597551 Mar 23 05:16 input.tar.gz
[2026-03-23 06:19:36] -rw-r--r-- 2 boinc boinc     15845 Mar 23 05:16 start_atlas.sh
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc         0 Mar 23 05:16 boinc_setup_complete
[2026-03-23 06:19:36] drwxrwx--x 2 boinc boinc      4096 Mar 23 05:16 shared
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc      6366 Mar 23 05:16 init_data.xml
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc         0 Mar 23 05:16 boinc_lockfile
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc      2624 Mar 23 05:16 pandaJob.out
[2026-03-23 06:19:36] -rw------- 1 boinc boinc   1010671 Mar 23 05:17 agis_schedconf.cvmfs.json
[2026-03-23 06:19:36] -rw------- 1 boinc boinc   1511579 Mar 23 05:17 agis_ddmendpoints.agis.ALL.json
[2026-03-23 06:19:36] -rw------- 1 boinc boinc       416 Mar 23 05:17 workernode_map.json
[2026-03-23 06:19:36] drwx------ 5 boinc boinc      4096 Mar 23 05:17 pilot3
[2026-03-23 06:19:36] -rw------- 1 boinc boinc 203135837 Mar 23 06:18 HITS.49176543._000034.pool.root.1
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc       529 Mar 23 06:18 boinc_task_state.xml
[2026-03-23 06:19:36] -rw------- 1 boinc boinc      1016 Mar 23 06:18 memory_monitor_summary.json
[2026-03-23 06:19:36] -rw------- 1 boinc boinc    366896 Mar 23 06:18 log.49176543._000034.job.log.tgz.1
[2026-03-23 06:19:36] -rw------- 1 boinc boinc      6250 Mar 23 06:18 heartbeat.json
[2026-03-23 06:19:36] -rw------- 1 boinc boinc        95 Mar 23 06:19 pilot_heartbeat.json
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc      8192 Mar 23 06:19 boinc_mmap_file
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc        27 Mar 23 06:19 wrapper_checkpoint.txt
[2026-03-23 06:19:36] -rw------- 1 boinc boinc      4960 Mar 23 06:19 pilotlog.txt
[2026-03-23 06:19:36] -rw------- 1 boinc boinc    563419 Mar 23 06:19 log.49176543._000034.job.log.1
[2026-03-23 06:19:36] -rw------- 1 boinc boinc       357 Mar 23 06:19 output.list
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc       620 Mar 23 06:19 runtime_log
[2026-03-23 06:19:36] -rw------- 1 boinc boinc    952320 Mar 23 06:19 result.tar.gz
[2026-03-23 06:19:36] -rw------- 1 boinc boinc       636 Mar 23 06:19 QO1MDmNjYO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtx3LDmfREnpn.diag
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc      8856 Mar 23 06:19 runtime_log.err
[2026-03-23 06:19:36] -rw-r--r-- 1 boinc boinc     21411 Mar 23 06:19 stderr.txt
[2026-03-23 06:19:36] HITS file was successfully produced:
[2026-03-23 06:19:36] -rw------- 1 boinc boinc 203135837 Mar 23 06:18 shared/HITS.pool.root.1
[2026-03-23 06:19:36]  *** Contents of shared directory: ***
[2026-03-23 06:19:36] total 422668
[2026-03-23 06:19:36] -rw-r--r-- 2 boinc boinc 228101828 Mar 23 05:16 ATLAS.root_0
[2026-03-23 06:19:36] -rw-r--r-- 2 boinc boinc    597551 Mar 23 05:16 input.tar.gz
[2026-03-23 06:19:36] -rw-r--r-- 2 boinc boinc     15845 Mar 23 05:16 start_atlas.sh
[2026-03-23 06:19:36] -rw------- 1 boinc boinc 203135837 Mar 23 06:18 HITS.pool.root.1
[2026-03-23 06:19:36] -rw------- 1 boinc boinc    952320 Mar 23 06:19 result.tar.gz
06:19:38 (335847): run_atlas exited; CPU time 39839.640250
06:19:38 (335847): called boinc_finish(0)

</stderr_txt>
]]>

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