Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:54:26 (834940): wrapper (7.7.26015): starting
01:54:26 (834940): wrapper: running run_atlas (--nthreads 4)
[2026-03-27 01:54:26] Arguments: --nthreads 4
[2026-03-27 01:54:26] Threads: 4
[2026-03-27 01:54:26] Checking for CVMFS
[2026-03-27 01:54:26] No cvmfs_config command found, will try listing directly
[2026-03-27 01:54:26] CVMFS is ok
[2026-03-27 01:54:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 01:54:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-27 01:54:26] Further information can be found at the LHC@home message board.
[2026-03-27 01:54:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 01:54:26] Checking for apptainer binary...
[2026-03-27 01:54:26] which: no apptainer in ((null))
[2026-03-27 01:54:26] apptainer is not installed, using version from CVMFS
[2026-03-27 01:54:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 01:54:27] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-27 01:54:27] apptainer works
[2026-03-27 01:54:27] Set ATHENA_PROC_NUMBER=4
[2026-03-27 01:54:27] Set ATHENA_CORE_NUMBER=4
[2026-03-27 01:54:27] Starting ATLAS job with PandaID=7043764661
[2026-03-27 01:54:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 04:52:55]  *** The last 200 lines of the pilot log: ***
[2026-03-27 04:52:55] 2026-03-27 03:52:13,544 | INFO     | job 7043764661 has state=finished
[2026-03-27 04:52:55] 2026-03-27 03:52:13,544 | INFO     | preparing for final server update for job 7043764661 in state='finished'
[2026-03-27 04:52:55] 2026-03-27 03:52:13,544 | INFO     | reading metadata from: /var/lib/boinc/var/slot76/slots/0/PanDA_Pilot-7043764661/jobReport.json
[2026-03-27 04:52:55] 2026-03-27 03:52:13,547 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot76/slots/0/workernode_map.json
[2026-03-27 04:52:55] 2026-03-27 03:52:13,547 | INFO     | this job has now completed (state=finished)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,547 | INFO     | log transfer has been attempted: DONE
[2026-03-27 04:52:55] 2026-03-27 03:52:13,548 | INFO     | job 7043764661 has finished - writing final server update
[2026-03-27 04:52:55] 2026-03-27 03:52:13,548 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1674528/.job.ad'
[2026-03-27 04:52:55] 2026-03-27 03:52:13,548 | INFO     | total number of processed events: 400 (read)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,573 | INFO     | using path: /var/lib/boinc/var/slot76/slots/0/PanDA_Pilot-7043764661/memory_monitor_summary.json (trf name=prmon)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,573 | INFO     | extracted standard info from prmon json
[2026-03-27 04:52:55] 2026-03-27 03:52:13,573 | INFO     | extracted standard memory fields from prmon json
[2026-03-27 04:52:55] 2026-03-27 03:52:13,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-27 04:52:55] 2026-03-27 03:52:13,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-27 04:52:55] 2026-03-27 03:52:13,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-27 04:52:55] 2026-03-27 03:52:13,577 | INFO     | fitting pss+swap vs Time
[2026-03-27 04:52:55] 2026-03-27 03:52:13,577 | INFO     | sum of square deviations: 1605454976.9479809
[2026-03-27 04:52:55] 2026-03-27 03:52:13,578 | INFO     | sum of deviations: 20764834813.809265
[2026-03-27 04:52:55] 2026-03-27 03:52:13,578 | INFO     | mean x: 1774578243.0173411
[2026-03-27 04:52:55] 2026-03-27 03:52:13,578 | INFO     | mean y: 2305921.063583815
[2026-03-27 04:52:55] 2026-03-27 03:52:13,578 | INFO     | intersect: -22949956589.894966
[2026-03-27 04:52:55] 2026-03-27 03:52:13,579 | INFO     | chi2: 1.5026203292158404
[2026-03-27 04:52:55] 2026-03-27 03:52:13,579 | INFO     | sum of square deviations: 1470234751.9464278
[2026-03-27 04:52:55] 2026-03-27 03:52:13,580 | INFO     | sum of deviations: 20052796361.607132
[2026-03-27 04:52:55] 2026-03-27 03:52:13,580 | INFO     | mean x: 1774578090.517857
[2026-03-27 04:52:55] 2026-03-27 03:52:13,580 | INFO     | mean y: 2305118.130952381
[2026-03-27 04:52:55] 2026-03-27 03:52:13,580 | INFO     | intersect: -24201484807.12642
[2026-03-27 04:52:55] 2026-03-27 03:52:13,581 | INFO     | chi2: 1.503994543316304
[2026-03-27 04:52:55] 2026-03-27 03:52:13,581 | INFO     | current chi2=1.503994543316304 (change=-0.09145451274313027 %)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,581 | INFO     | right removable region: 167
[2026-03-27 04:52:55] 2026-03-27 03:52:13,581 | INFO     | sum of square deviations: 1470232921.9464278
[2026-03-27 04:52:55] 2026-03-27 03:52:13,582 | INFO     | sum of deviations: -3545465159.5357146
[2026-03-27 04:52:55] 2026-03-27 03:52:13,582 | INFO     | mean x: 1774578395.517857
[2026-03-27 04:52:55] 2026-03-27 03:52:13,582 | INFO     | mean y: 2332959.511904762
[2026-03-27 04:52:55] 2026-03-27 03:52:13,582 | INFO     | intersect: 4281726911.487773
[2026-03-27 04:52:55] 2026-03-27 03:52:13,583 | INFO     | chi2: 0.013414964153591499
[2026-03-27 04:52:55] 2026-03-27 03:52:13,583 | INFO     | current chi2=0.013414964153591499 (change=99.10722862636949 %)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,583 | INFO     | sum of square deviations: 1342824966.9447916
[2026-03-27 04:52:55] 2026-03-27 03:52:13,584 | INFO     | sum of deviations: -2414752209.0613494
[2026-03-27 04:52:55] 2026-03-27 03:52:13,584 | INFO     | mean x: 1774578548.018405
[2026-03-27 04:52:55] 2026-03-27 03:52:13,584 | INFO     | mean y: 2331599.6871165643
[2026-03-27 04:52:55] 2026-03-27 03:52:13,584 | INFO     | intersect: 3193490220.1065598
[2026-03-27 04:52:55] 2026-03-27 03:52:13,585 | INFO     | chi2: 0.012232281646838337
[2026-03-27 04:52:55] 2026-03-27 03:52:13,585 | INFO     | current chi2=0.012232281646838337 (change=8.816143622989328 %)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,585 | INFO     | left removable region: 20
[2026-03-27 04:52:55] 2026-03-27 03:52:13,585 | INFO     | sum of square deviations: 984932719.9727925
[2026-03-27 04:52:55] 2026-03-27 03:52:13,586 | INFO     | sum of deviations: 1070868494.5578232
[2026-03-27 04:52:55] 2026-03-27 03:52:13,586 | INFO     | mean x: 1774578670.0136054
[2026-03-27 04:52:55] 2026-03-27 03:52:13,586 | INFO     | mean y: 2326523.7210884355
[2026-03-27 04:52:55] 2026-03-27 03:52:13,586 | INFO     | intersect: -1927084846.5138125
[2026-03-27 04:52:55] 2026-03-27 03:52:13,586 | INFO     | chi2: 0.001991121014986849
[2026-03-27 04:52:55] 2026-03-27 03:52:13,587 | INFO     | current memory leak: 1.09 B/s (using 147 data points, chi2=0.00)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,587 | INFO     | could have reported an average CPU frequency of 2680 MHz (9 samples)
[2026-03-27 04:52:55] 2026-03-27 03:52:13,587 | INFO     | ..............................
[2026-03-27 04:52:55] 2026-03-27 03:52:13,587 | INFO     | . Timing measurements:
[2026-03-27 04:52:55] 2026-03-27 03:52:13,587 | INFO     | . get job = 0 s
[2026-03-27 04:52:55] 2026-03-27 03:52:13,587 | INFO     | . initial setup = 23 s
[2026-03-27 04:52:55] 2026-03-27 03:52:13,587 | INFO     | . payload setup = 35 s
[2026-03-27 04:52:55] 2026-03-27 03:52:13,588 | INFO     | . stage-in = 0 s
[2026-03-27 04:52:55] 2026-03-27 03:52:13,588 | INFO     | . payload execution = 10559 s
[2026-03-27 04:52:55] 2026-03-27 03:52:13,588 | INFO     | . stage-out = 1 s
[2026-03-27 04:52:55] 2026-03-27 03:52:13,588 | INFO     | . log creation = 0 s
[2026-03-27 04:52:55] 2026-03-27 03:52:13,588 | INFO     | ..............................
[2026-03-27 04:52:55] 2026-03-27 03:52:14,102 | INFO     | 
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | job summary report
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | --------------------------------------------------
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | PanDA job id: 7043764661
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | task id: 48955010
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | errors: (none)
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | pilot state: finished 
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | transexitcode: 0
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | exeerrorcode: 0
[2026-03-27 04:52:55] 2026-03-27 03:52:14,103 | INFO     | exeerrordiag: 
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | exitcode: 0
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | exitmsg: OK
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | cpuconsumptiontime: 36756 s
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | nevents: 400
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | neventsw: 0
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | pid: 845711
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | pgrp: 845711
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | corecount: 4
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | event service: False
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | sizes: {0: 2279091, 1: 2280220, 2: 2280220, 10598: 2309312, 10599: 2318360, 10600: 2318416, 10601: 2318802}
[2026-03-27 04:52:55] 2026-03-27 03:52:14,104 | INFO     | --------------------------------------------------
[2026-03-27 04:52:55] 2026-03-27 03:52:14,105 | INFO     | 
[2026-03-27 04:52:55] 2026-03-27 03:52:14,105 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/0
[2026-03-27 04:52:55] 2026-03-27 03:52:14,138 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-27 04:52:55] 2026-03-27 03:52:14,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,141 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-27 04:52:55] 2026-03-27 03:52:14,141 | INFO     | job 7043764661 has completed (purged errors)
[2026-03-27 04:52:55] 2026-03-27 03:52:14,141 | INFO     | overall cleanup function is called
[2026-03-27 04:52:55] 2026-03-27 03:52:15,151 | INFO     | --- collectZombieJob: --- 10, [845711]
[2026-03-27 04:52:55] 2026-03-27 03:52:15,152 | INFO     | zombie collector waiting for pid 845711
[2026-03-27 04:52:55] 2026-03-27 03:52:15,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-27 04:52:55] 2026-03-27 03:52:15,152 | INFO     | collected zombie processes
[2026-03-27 04:52:55] 2026-03-27 03:52:15,152 | INFO     | will attempt to kill all subprocesses of pid=845711
[2026-03-27 04:52:55] 2026-03-27 03:52:15,993 | INFO     | process IDs to be killed: [845711] (in reverse order)
[2026-03-27 04:52:55] 2026-03-27 03:52:16,341 | WARNING  | found no corresponding commands to process id(s)
[2026-03-27 04:52:55] 2026-03-27 03:52:16,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-27 04:52:55] 2026-03-27 03:52:16,374 | INFO     | did not find any defunct processes belonging to 845711
[2026-03-27 04:52:55] 2026-03-27 03:52:16,404 | INFO     | did not find any defunct processes belonging to 845711
[2026-03-27 04:52:55] 2026-03-27 03:52:16,405 | INFO     | ready for new job
[2026-03-27 04:52:55] 2026-03-27 03:52:16,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-27 04:52:55] 2026-03-27 03:52:16,408 | INFO     | **************************************
[2026-03-27 04:52:55] 2026-03-27 03:52:16,408 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-27 04:52:55] 2026-03-27 03:52:16,408 | INFO     | **************************************
[2026-03-27 04:52:55] 2026-03-27 03:52:16,408 | INFO     | 
[2026-03-27 04:52:55] 2026-03-27 03:52:16,417 | INFO     | architecture information:
[2026-03-27 04:52:55] 2026-03-27 03:52:16,417 | INFO     | executing command: cat /etc/os-release
[2026-03-27 04:52:55] 2026-03-27 03:52:16,444 | INFO     | cat /etc/os-release:
[2026-03-27 04:52:55] NAME="CentOS Linux"
[2026-03-27 04:52:55] VERSION="7 (Core)"
[2026-03-27 04:52:55] ID="centos"
[2026-03-27 04:52:55] ID_LIKE="rhel fedora"
[2026-03-27 04:52:55] VERSION_ID="7"
[2026-03-27 04:52:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-27 04:52:55] ANSI_COLOR="0;31"
[2026-03-27 04:52:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-27 04:52:55] HOME_URL="https://www.centos.org/"
[2026-03-27 04:52:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-27 04:52:55] 
[2026-03-27 04:52:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-27 04:52:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-27 04:52:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-27 04:52:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-27 04:52:55] 
[2026-03-27 04:52:55] 2026-03-27 03:52:16,445 | INFO     | **************************************
[2026-03-27 04:52:55] 2026-03-27 03:52:16,948 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/0
[2026-03-27 04:52:55] 2026-03-27 03:52:16,975 | INFO     | sufficient remaining disk space (239725445120 B)
[2026-03-27 04:52:55] 2026-03-27 03:52:16,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-27 04:52:55] 2026-03-27 03:52:16,976 | INFO     | current server update state: UPDATING_FINAL
[2026-03-27 04:52:55] 2026-03-27 03:52:16,976 | INFO     | update_server=False
[2026-03-27 04:52:55] 2026-03-27 03:52:16,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-27 04:52:55] 2026-03-27 03:52:16,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-27 04:52:55] 2026-03-27 03:52:16,976 | INFO     | aborting loop
[2026-03-27 04:52:55] 2026-03-27 03:52:17,279 | INFO     | all job control threads have been joined
[2026-03-27 04:52:55] 2026-03-27 03:52:17,609 | INFO     | all data control threads have been joined
[2026-03-27 04:52:55] 2026-03-27 03:52:17,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 04:52:55] 2026-03-27 03:52:17,831 | INFO     | all payload control threads have been joined
[2026-03-27 04:52:55] 2026-03-27 03:52:17,981 | INFO     | [job] retrieve thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:17,982 | INFO     | [job] job monitor thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:18,284 | INFO     | [job] control thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:18,455 | INFO     | [payload] validate_post thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:18,561 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:18,615 | INFO     | [data] control thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:18,636 | INFO     | [job] validate thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:18,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-27 04:52:55] 2026-03-27 03:52:18,814 | INFO     | [data] copytool_in thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:18,836 | INFO     | [payload] control thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:19,214 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:19,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-27 04:52:55] 2026-03-27 03:52:19,463 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:19,564 | INFO     | [payload] failed_post thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:19,695 | INFO     | [job] queue monitor thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:19,772 | INFO     | [data] copytool_out thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:23,273 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:27,040 | INFO     | job.realtimelogging is not enabled
[2026-03-27 04:52:55] 2026-03-27 03:52:28,045 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 04:52:55] 2026-03-27 03:52:46,147 | INFO     | PID=840202 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-27 04:52:55] 2026-03-27 03:52:46,148 | INFO     | .. there are 23 such processes running
[2026-03-27 04:52:55] 2026-03-27 03:52:46,148 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 04:52:55] 2026-03-27 03:52:46,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 04:52:55] 2026-03-27 03:52:46,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 04:52:55] 2026-03-27 03:52:48,792 | INFO     | [monitor] cgroup control has ended
[2026-03-27 04:52:55] 2026-03-27 03:52:49,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23335195547456)>', '<ExcThread(monitor, started 23334880253696)>']
[2026-03-27 04:52:55] 2026-03-27 03:52:50,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 04:52:55] 2026-03-27 03:52:50,168 | INFO     | [monitor] control thread has ended
[2026-03-27 04:52:55] 2026-03-27 03:52:54,609 | INFO     | all workflow threads have been joined
[2026-03-27 04:52:55] 2026-03-27 03:52:54,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 04:52:55] 2026-03-27 03:52:54,610 | INFO     | traces error code: 0
[2026-03-27 04:52:55] 2026-03-27 03:52:54,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 04:52:55] 2026-03-27 03:52:54,751 [wrapper] ==== pilot stdout END ====
[2026-03-27 04:52:55] 2026-03-27 03:52:54,755 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 04:52:55] 2026-03-27 03:52:54,760 [wrapper] pilotpid: 840202
[2026-03-27 04:52:55] 2026-03-27 03:52:54,764 [wrapper] Pilot exit status: 0
[2026-03-27 04:52:55] 2026-03-27 03:52:54,781 [wrapper] pandaids: 7043764661
[2026-03-27 04:52:55] 2026-03-27 03:52:54,997 [wrapper] cleanup supervisor_pilot 1115501 840203
[2026-03-27 04:52:55] 2026-03-27 03:52:55,001 [wrapper] Test setup, not cleaning
[2026-03-27 04:52:55] 2026-03-27 03:52:55,006 [wrapper] apfmon messages muted
[2026-03-27 04:52:55] 2026-03-27 03:52:55,009 [wrapper] ==== wrapper stdout END ====
[2026-03-27 04:52:55] 2026-03-27 03:52:55,013 [wrapper] ==== wrapper stderr END ====
[2026-03-27 04:52:55]  *** Error codes and diagnostics ***
[2026-03-27 04:52:55]     "exeErrorCode": 0,
[2026-03-27 04:52:55]     "exeErrorDiag": "",
[2026-03-27 04:52:55]     "pilotErrorCode": 0,
[2026-03-27 04:52:55]     "pilotErrorDiag": "",
[2026-03-27 04:52:55]  *** Listing of results directory ***
[2026-03-27 04:52:55] total 618484
[2026-03-27 04:52:55] -rwx------. 1 boinc boinc     36322 Mar 22 15:07 runpilot2-wrapper.sh
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc    585013 Mar 22 16:09 pilot3.tar.gz
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc      5111 Mar 22 16:14 queuedata.json
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc       100 Mar 27 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 04:52:55] -rwxr-xr-x. 1 boinc boinc      7986 Mar 27 01:54 run_atlas
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc       105 Mar 27 01:54 job.xml
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc      6622 Mar 27 01:54 init_data.xml
[2026-03-27 04:52:55] -rw-r--r--. 2 boinc boinc 440634830 Mar 27 01:54 EVNT.46701403._001560.pool.root.1
[2026-03-27 04:52:55] drwxrwx--x. 2 boinc boinc      4096 Mar 27 01:54 shared
[2026-03-27 04:52:55] -rw-r--r--. 2 boinc boinc    597535 Mar 27 01:54 input.tar.gz
[2026-03-27 04:52:55] -rw-r--r--. 2 boinc boinc     15845 Mar 27 01:54 start_atlas.sh
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc         0 Mar 27 01:54 boinc_lockfile
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc      2564 Mar 27 01:54 pandaJob.out
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc   1012402 Mar 27 01:55 agis_schedconf.cvmfs.json
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc   1511579 Mar 27 01:55 agis_ddmendpoints.agis.ALL.json
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc       443 Mar 27 01:55 workernode_map.json
[2026-03-27 04:52:55] drwx------. 5 boinc boinc      4096 Mar 27 01:55 pilot3
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc 185151947 Mar 27 04:51 HITS.48955010._028328.pool.root.1
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc        95 Mar 27 04:51 pilot_heartbeat.json
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc       531 Mar 27 04:51 boinc_task_state.xml
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc      1027 Mar 27 04:52 memory_monitor_summary.json
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc    377807 Mar 27 04:52 log.48955010._028328.job.log.tgz.1
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc      6356 Mar 27 04:52 heartbeat.json
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc      8192 Mar 27 04:52 boinc_mmap_file
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc        27 Mar 27 04:52 wrapper_checkpoint.txt
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc      4902 Mar 27 04:52 pilotlog.txt
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc   1417432 Mar 27 04:52 log.48955010._028328.job.log.1
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc       357 Mar 27 04:52 output.list
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc       620 Mar 27 04:52 runtime_log
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc   1812480 Mar 27 04:52 result.tar.gz
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc      9205 Mar 27 04:52 runtime_log.err
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc       666 Mar 27 04:52 3PgMDmddYO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm382LDmm3LKYm.diag
[2026-03-27 04:52:55] -rw-r--r--. 1 boinc boinc     21170 Mar 27 04:52 stderr.txt
[2026-03-27 04:52:55] HITS file was successfully produced:
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc 185151947 Mar 27 04:51 shared/HITS.pool.root.1
[2026-03-27 04:52:55]  *** Contents of shared directory: ***
[2026-03-27 04:52:55] total 613504
[2026-03-27 04:52:55] -rw-r--r--. 2 boinc boinc 440634830 Mar 27 01:54 ATLAS.root_0
[2026-03-27 04:52:55] -rw-r--r--. 2 boinc boinc    597535 Mar 27 01:54 input.tar.gz
[2026-03-27 04:52:55] -rw-r--r--. 2 boinc boinc     15845 Mar 27 01:54 start_atlas.sh
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc 185151947 Mar 27 04:51 HITS.pool.root.1
[2026-03-27 04:52:55] -rw-------. 1 boinc boinc   1812480 Mar 27 04:52 result.tar.gz
04:52:56 (834940): run_atlas exited; CPU time 37391.510311
04:52:56 (834940): called boinc_finish(0)

</stderr_txt>
]]>

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