Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:09:08 (1106): wrapper (7.7.26015): starting
10:09:08 (1106): wrapper: running run_atlas (--nthreads 8)
[2026-03-22 10:09:08] Arguments: --nthreads 8
[2026-03-22 10:09:08] Threads: 8
[2026-03-22 10:09:08] Checking for CVMFS
[2026-03-22 10:09:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-22 10:09:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-22 10:09:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-22 10:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-22 10:09:09] 2.11.2.0 2828 18693 78456 157578 1 1 20263744 20275200 1 130560 0 4825839 99.977 665687 10741 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-22 10:09:09] CVMFS is ok
[2026-03-22 10:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-22 10:09:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-22 10:09:09] Further information can be found at the LHC@home message board.
[2026-03-22 10:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-22 10:09:09] Checking for apptainer binary...
[2026-03-22 10:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-22 10:09:09] Running /usr/bin/apptainer --version
[2026-03-22 10:09:09] apptainer version 1.3.2-1.el7
[2026-03-22 10:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-22 10:09:11] c-115-14.aglt2.org
[2026-03-22 10:09:11] apptainer works
[2026-03-22 10:09:11] Set ATHENA_PROC_NUMBER=8
[2026-03-22 10:09:11] Set ATHENA_CORE_NUMBER=8
[2026-03-22 10:09:11] Starting ATLAS job with PandaID=7055025454
[2026-03-22 10:09:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-22 11:53:53]  *** The last 200 lines of the pilot log: ***
[2026-03-22 11:53:53] 2026-03-22 15:52:48,395 | INFO     | sum of deviations: 20035616468.999996
[2026-03-22 11:53:53] 2026-03-22 15:52:48,396 | INFO     | mean x: 1774191660.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,396 | INFO     | mean y: 2478328.326732673
[2026-03-22 11:53:53] 2026-03-22 15:52:48,396 | INFO     | intersect: -111273974595.86243
[2026-03-22 11:53:53] 2026-03-22 15:52:48,396 | INFO     | chi2: 1.786310959769673
[2026-03-22 11:53:53] 2026-03-22 15:52:48,396 | INFO     | sum of square deviations: 274312120.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,397 | INFO     | sum of deviations: 19127375787.5
[2026-03-22 11:53:53] 2026-03-22 15:52:48,397 | INFO     | mean x: 1774191507.5
[2026-03-22 11:53:53] 2026-03-22 15:52:48,397 | INFO     | mean y: 2475257.1354166665
[2026-03-22 11:53:53] 2026-03-22 15:52:48,397 | INFO     | intersect: -123709257505.32373
[2026-03-22 11:53:53] 2026-03-22 15:52:48,397 | INFO     | chi2: 1.7861509393465316
[2026-03-22 11:53:53] 2026-03-22 15:52:48,398 | INFO     | current chi2=1.7861509393465316 (change=0.008958150442181203 %)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,398 | INFO     | right removable region: 95
[2026-03-22 11:53:53] 2026-03-22 15:52:48,398 | INFO     | sum of square deviations: 274312120.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,398 | INFO     | sum of deviations: 1594381522.0000002
[2026-03-22 11:53:53] 2026-03-22 15:52:48,398 | INFO     | mean x: 1774191812.5
[2026-03-22 11:53:53] 2026-03-22 15:52:48,399 | INFO     | mean y: 2539572.0416666665
[2026-03-22 11:53:53] 2026-03-22 15:52:48,399 | INFO     | intersect: -10309577305.381355
[2026-03-22 11:53:53] 2026-03-22 15:52:48,399 | INFO     | chi2: 0.05901973962008832
[2026-03-22 11:53:53] 2026-03-22 15:52:48,399 | INFO     | current chi2=0.05901973962008832 (change=96.69599857195647 %)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,399 | INFO     | sum of square deviations: 233641590.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,400 | INFO     | sum of deviations: -1243854172.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,400 | INFO     | mean x: 1774191965.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,400 | INFO     | mean y: 2549968.4835164836
[2026-03-22 11:53:53] 2026-03-22 15:52:48,400 | INFO     | intersect: 9447940566.938732
[2026-03-22 11:53:53] 2026-03-22 15:52:48,400 | INFO     | chi2: 0.005563593728428126
[2026-03-22 11:53:53] 2026-03-22 15:52:48,400 | INFO     | current chi2=0.005563593728428126 (change=90.57333399936846 %)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,401 | INFO     | sum of square deviations: 197203697.5
[2026-03-22 11:53:53] 2026-03-22 15:52:48,401 | INFO     | sum of deviations: -1546478221.9999998
[2026-03-22 11:53:53] 2026-03-22 15:52:48,401 | INFO     | mean x: 1774192117.5
[2026-03-22 11:53:53] 2026-03-22 15:52:48,401 | INFO     | mean y: 2551221.2558139535
[2026-03-22 11:53:53] 2026-03-22 15:52:48,401 | INFO     | intersect: 13915827220.342062
[2026-03-22 11:53:53] 2026-03-22 15:52:48,402 | INFO     | chi2: 0.004281320877113458
[2026-03-22 11:53:53] 2026-03-22 15:52:48,402 | INFO     | current chi2=0.004281320877113458 (change=23.047564468316178 %)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,402 | INFO     | left removable region: 30
[2026-03-22 11:53:53] 2026-03-22 15:52:48,402 | INFO     | sum of square deviations: 85136480.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,402 | INFO     | sum of deviations: -1418373464.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,402 | INFO     | mean x: 1774192392.0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,403 | INFO     | mean y: 2552711.2615384613
[2026-03-22 11:53:53] 2026-03-22 15:52:48,403 | INFO     | intersect: 29560591860.207863
[2026-03-22 11:53:53] 2026-03-22 15:52:48,403 | INFO     | chi2: 0.0022263264093948325
[2026-03-22 11:53:53] 2026-03-22 15:52:48,403 | INFO     | current memory leak: -16.66 B/s (using 65 data points, chi2=0.00)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,403 | INFO     | could have reported an average CPU frequency of 1779 MHz (7 samples)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | ..............................
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . Timing measurements:
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . get job = 0 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . initial setup = 8 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . payload setup = 15 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . stage-in = 0 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . payload execution = 6158 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . stage-out = 0 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,404 | INFO     | . log creation = 0 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,405 | INFO     | ..............................
[2026-03-22 11:53:53] 2026-03-22 15:52:48,481 | INFO     | 
[2026-03-22 11:53:53] 2026-03-22 15:52:48,481 | INFO     | job summary report
[2026-03-22 11:53:53] 2026-03-22 15:52:48,481 | INFO     | --------------------------------------------------
[2026-03-22 11:53:53] 2026-03-22 15:52:48,481 | INFO     | PanDA job id: 7055025454
[2026-03-22 11:53:53] 2026-03-22 15:52:48,482 | INFO     | task id: 48955010
[2026-03-22 11:53:53] 2026-03-22 15:52:48,482 | INFO     | errors: (none)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,482 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-22 11:53:53] 2026-03-22 15:52:48,482 | INFO     | pilot state: finished 
[2026-03-22 11:53:53] 2026-03-22 15:52:48,482 | INFO     | transexitcode: 0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,482 | INFO     | exeerrorcode: 0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,483 | INFO     | exeerrordiag: 
[2026-03-22 11:53:53] 2026-03-22 15:52:48,483 | INFO     | exitcode: 0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,483 | INFO     | exitmsg: OK
[2026-03-22 11:53:53] 2026-03-22 15:52:48,483 | INFO     | cpuconsumptiontime: 45223 s
[2026-03-22 11:53:53] 2026-03-22 15:52:48,483 | INFO     | nevents: 400
[2026-03-22 11:53:53] 2026-03-22 15:52:48,483 | INFO     | neventsw: 0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,484 | INFO     | pid: 9559
[2026-03-22 11:53:53] 2026-03-22 15:52:48,484 | INFO     | pgrp: 9559
[2026-03-22 11:53:53] 2026-03-22 15:52:48,484 | INFO     | corecount: 8
[2026-03-22 11:53:53] 2026-03-22 15:52:48,484 | INFO     | event service: False
[2026-03-22 11:53:53] 2026-03-22 15:52:48,484 | INFO     | sizes: {0: 2279637, 1: 2280154, 12: 2280154, 6177: 2307027, 6178: 2316081, 6180: 2316219}
[2026-03-22 11:53:53] 2026-03-22 15:52:48,484 | INFO     | --------------------------------------------------
[2026-03-22 11:53:53] 2026-03-22 15:52:48,485 | INFO     | 
[2026-03-22 11:53:53] 2026-03-22 15:52:48,485 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-22 11:53:53] 2026-03-22 15:52:48,513 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,514 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-22 11:53:53] 2026-03-22 15:52:48,518 | INFO     | job 7055025454 has completed (purged errors)
[2026-03-22 11:53:53] 2026-03-22 15:52:48,518 | INFO     | overall cleanup function is called
[2026-03-22 11:53:53] 2026-03-22 15:52:49,525 | INFO     | --- collectZombieJob: --- 10, [9559]
[2026-03-22 11:53:53] 2026-03-22 15:52:49,526 | INFO     | zombie collector waiting for pid 9559
[2026-03-22 11:53:53] 2026-03-22 15:52:49,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-22 11:53:53] 2026-03-22 15:52:49,526 | INFO     | collected zombie processes
[2026-03-22 11:53:53] 2026-03-22 15:52:49,526 | INFO     | will attempt to kill all subprocesses of pid=9559
[2026-03-22 11:53:53] 2026-03-22 15:52:49,614 | INFO     | process IDs to be killed: [9559] (in reverse order)
[2026-03-22 11:53:53] 2026-03-22 15:52:49,673 | WARNING  | found no corresponding commands to process id(s)
[2026-03-22 11:53:53] 2026-03-22 15:52:49,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-22 11:53:53] 2026-03-22 15:52:49,677 | INFO     | did not find any defunct processes belonging to 9559
[2026-03-22 11:53:53] 2026-03-22 15:52:49,681 | INFO     | did not find any defunct processes belonging to 9559
[2026-03-22 11:53:53] 2026-03-22 15:52:49,681 | INFO     | ready for new job
[2026-03-22 11:53:53] 2026-03-22 15:52:49,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-22 11:53:53] 2026-03-22 15:52:49,683 | INFO     | **************************************
[2026-03-22 11:53:53] 2026-03-22 15:52:49,684 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-22 11:53:53] 2026-03-22 15:52:49,684 | INFO     | **************************************
[2026-03-22 11:53:53] 2026-03-22 15:52:49,684 | INFO     | 
[2026-03-22 11:53:53] 2026-03-22 15:52:49,684 | INFO     | architecture information:
[2026-03-22 11:53:53] 2026-03-22 15:52:49,685 | INFO     | executing command: cat /etc/os-release
[2026-03-22 11:53:53] 2026-03-22 15:52:49,704 | INFO     | cat /etc/os-release:
[2026-03-22 11:53:53] NAME="CentOS Linux"
[2026-03-22 11:53:53] VERSION="7 (Core)"
[2026-03-22 11:53:53] ID="centos"
[2026-03-22 11:53:53] ID_LIKE="rhel fedora"
[2026-03-22 11:53:53] VERSION_ID="7"
[2026-03-22 11:53:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-22 11:53:53] ANSI_COLOR="0;31"
[2026-03-22 11:53:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-22 11:53:53] HOME_URL="https://www.centos.org/"
[2026-03-22 11:53:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-22 11:53:53] 
[2026-03-22 11:53:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-22 11:53:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-22 11:53:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-22 11:53:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-22 11:53:53] 
[2026-03-22 11:53:53] 2026-03-22 15:52:49,704 | INFO     | **************************************
[2026-03-22 11:53:53] 2026-03-22 15:52:50,206 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-22 11:53:53] 2026-03-22 15:52:50,225 | INFO     | sufficient remaining disk space (18129879040 B)
[2026-03-22 11:53:53] 2026-03-22 15:52:50,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-22 11:53:53] 2026-03-22 15:52:50,226 | INFO     | current server update state: UPDATING_FINAL
[2026-03-22 11:53:53] 2026-03-22 15:52:50,226 | INFO     | update_server=False
[2026-03-22 11:53:53] 2026-03-22 15:52:50,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-22 11:53:53] 2026-03-22 15:52:50,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-22 11:53:53] 2026-03-22 15:52:50,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-22 11:53:53] 2026-03-22 15:52:50,768 | INFO     | all data control threads have been joined
[2026-03-22 11:53:53] 2026-03-22 15:52:50,877 | INFO     | all payload control threads have been joined
[2026-03-22 11:53:53] 2026-03-22 15:52:51,209 | WARNING  | process 9559 can no longer be monitored (due to stat problems) - aborting
[2026-03-22 11:53:53] 2026-03-22 15:52:51,224 | INFO     | all job control threads have been joined
[2026-03-22 11:53:53] 2026-03-22 15:52:51,232 | INFO     | [job] retrieve thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:51,233 | INFO     | [job] queue monitor thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:51,279 | INFO     | [payload] validate_pre thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:51,280 | INFO     | [data] copytool_in thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:51,282 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-22 11:53:53] 2026-03-22 15:52:51,283 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-22 11:53:53] 2026-03-22 15:52:51,284 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-22 11:53:53] 2026-03-22 15:52:51,284 | WARNING  | maxPSS not found in memory monitor output
[2026-03-22 11:53:53] 2026-03-22 15:52:51,284 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7055025454/payload.stdout) since it has not been created yet
[2026-03-22 11:53:53] 2026-03-22 15:52:51,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-22 11:53:53] 2026-03-22 15:52:51,303 | INFO     | sufficient remaining disk space (18129879040 B)
[2026-03-22 11:53:53] 2026-03-22 15:52:51,303 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-22 11:53:53] 2026-03-22 15:52:51,304 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7055025454/HITS.48955010._051803.pool.root.1 since it does not exist
[2026-03-22 11:53:53] 2026-03-22 15:52:51,353 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:51,390 | INFO     | number of running child processes to parent process 9559: 1
[2026-03-22 11:53:53] 2026-03-22 15:52:51,390 | INFO     | maximum number of monitored processes: 6
[2026-03-22 11:53:53] 2026-03-22 15:52:51,390 | INFO     | aborting job monitoring since job object (job id=7055025454) has expired
[2026-03-22 11:53:53] 2026-03-22 15:52:51,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-22 11:53:53] 2026-03-22 15:52:51,391 | INFO     | will abort loop
[2026-03-22 11:53:53] 2026-03-22 15:52:51,475 | INFO     | [payload] validate_post thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:51,774 | INFO     | [data] control thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:51,882 | INFO     | [payload] control thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:52,049 | INFO     | [job] validate thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:52,074 | INFO     | [job] create_data_payload thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:52,230 | INFO     | [job] control thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:52,233 | INFO     | [data] copytool_out thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:52,248 | INFO     | [payload] failed_post thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:52,395 | INFO     | [job] job monitor thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:52,598 | INFO     | [payload] execute_payloads thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:52:53,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-22 11:53:53] 2026-03-22 15:52:57,308 | INFO     | [data] queue_monitor thread has finished
[2026-03-22 11:53:53] 2026-03-22 15:53:20,884 | INFO     | PID=4992 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-22 11:53:53] 2026-03-22 15:53:20,885 | INFO     | found 0 job(s) in 20 queues
[2026-03-22 11:53:53] 2026-03-22 15:53:20,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-22 11:53:53] 2026-03-22 15:53:20,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-22 11:53:53] 2026-03-22 15:53:46,740 | INFO     | [monitor] cgroup control has ended
[2026-03-22 11:53:53] 2026-03-22 15:53:48,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155997013824)>', '<ExcThread(monitor, started 140155100845824)>']
[2026-03-22 11:53:53] 2026-03-22 15:53:49,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-22 11:53:53] 2026-03-22 15:53:49,020 | INFO     | [monitor] control thread has ended
[2026-03-22 11:53:53] 2026-03-22 15:53:53,184 | INFO     | all workflow threads have been joined
[2026-03-22 11:53:53] 2026-03-22 15:53:53,185 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-22 11:53:53] 2026-03-22 15:53:53,185 | INFO     | traces error code: 0
[2026-03-22 11:53:53] 2026-03-22 15:53:53,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-22 11:53:53] 2026-03-22 15:53:53,300 [wrapper] ==== pilot stdout END ====
[2026-03-22 11:53:53] 2026-03-22 15:53:53,305 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-22 11:53:53] 2026-03-22 15:53:53,310 [wrapper] pilotpid: 4992
[2026-03-22 11:53:53] 2026-03-22 15:53:53,314 [wrapper] Pilot exit status: 0
[2026-03-22 11:53:53] 2026-03-22 15:53:53,333 [wrapper] pandaids: 7055025454
[2026-03-22 11:53:53] 2026-03-22 15:53:53,381 [wrapper] cleanup supervisor_pilot 16107 4993
[2026-03-22 11:53:53] 2026-03-22 15:53:53,386 [wrapper] Test setup, not cleaning
[2026-03-22 11:53:53] 2026-03-22 15:53:53,391 [wrapper] apfmon messages muted
[2026-03-22 11:53:53] 2026-03-22 15:53:53,395 [wrapper] ==== wrapper stdout END ====
[2026-03-22 11:53:53] 2026-03-22 15:53:53,399 [wrapper] ==== wrapper stderr END ====
[2026-03-22 11:53:53]  *** Error codes and diagnostics ***
[2026-03-22 11:53:53]     "exeErrorCode": 0,
[2026-03-22 11:53:53]     "exeErrorDiag": "",
[2026-03-22 11:53:53]     "pilotErrorCode": 0,
[2026-03-22 11:53:53]     "pilotErrorDiag": "",
[2026-03-22 11:53:53]  *** Listing of results directory ***
[2026-03-22 11:53:53] total 614304
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 17:44 pilot3.tar.gz
[2026-03-22 11:53:53] -rwx------ 1 boincer umatlas     36322 Mar 14 17:47 runpilot2-wrapper.sh
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 17:48 queuedata.json
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas       100 Mar 22 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-22 11:53:53] -rwxr-xr-x 1 boincer umatlas      7986 Mar 22 10:09 run_atlas
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas       105 Mar 22 10:09 job.xml
[2026-03-22 11:53:53] -rw-r--r-- 2 boincer umatlas 438230262 Mar 22 10:09 EVNT.46701403._001875.pool.root.1
[2026-03-22 11:53:53] -rw-r--r-- 2 boincer umatlas     15845 Mar 22 10:09 start_atlas.sh
[2026-03-22 11:53:53] drwxrwx--x 2 boincer umatlas      4096 Mar 22 10:09 shared
[2026-03-22 11:53:53] -rw-r--r-- 2 boincer umatlas    597531 Mar 22 10:09 input.tar.gz
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas         0 Mar 22 10:09 boinc_lockfile
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas      2561 Mar 22 10:09 pandaJob.out
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas        57 Mar 22 10:09 setup.sh.local
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas   1010671 Mar 22 10:09 agis_schedconf.cvmfs.json
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas   1511579 Mar 22 10:09 agis_ddmendpoints.agis.ALL.json
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas       431 Mar 22 10:09 workernode_map.json
[2026-03-22 11:53:53] drwx------ 5 boincer umatlas      4096 Mar 22 10:09 pilot3
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas      5910 Mar 22 11:47 init_data.xml
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas 184432062 Mar 22 11:52 HITS.48955010._051803.pool.root.1
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas       531 Mar 22 11:52 boinc_task_state.xml
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas      1046 Mar 22 11:52 memory_monitor_summary.json
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas    334207 Mar 22 11:52 log.48955010._051803.job.log.tgz.1
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas      6405 Mar 22 11:52 heartbeat.json
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas        95 Mar 22 11:53 pilot_heartbeat.json
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas        27 Mar 22 11:53 wrapper_checkpoint.txt
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas      8192 Mar 22 11:53 boinc_mmap_file
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas      6220 Mar 22 11:53 pilotlog.txt
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas    884380 Mar 22 11:53 log.48955010._051803.job.log.1
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas       357 Mar 22 11:53 output.list
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas       620 Mar 22 11:53 runtime_log
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas   1239040 Mar 22 11:53 result.tar.gz
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas      9341 Mar 22 11:53 runtime_log.err
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas       660 Mar 22 11:53 P08MDmj0lL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgvrLDmnpUp6n.diag
[2026-03-22 11:53:53] -rw-r--r-- 1 boincer umatlas     21370 Mar 22 11:53 stderr.txt
[2026-03-22 11:53:53] HITS file was successfully produced:
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas 184432062 Mar 22 11:52 shared/HITS.pool.root.1
[2026-03-22 11:53:53]  *** Contents of shared directory: ***
[2026-03-22 11:53:53] total 609892
[2026-03-22 11:53:53] -rw-r--r-- 2 boincer umatlas 438230262 Mar 22 10:09 ATLAS.root_0
[2026-03-22 11:53:53] -rw-r--r-- 2 boincer umatlas     15845 Mar 22 10:09 start_atlas.sh
[2026-03-22 11:53:53] -rw-r--r-- 2 boincer umatlas    597531 Mar 22 10:09 input.tar.gz
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas 184432062 Mar 22 11:52 HITS.pool.root.1
[2026-03-22 11:53:53] -rw------- 1 boincer umatlas   1239040 Mar 22 11:53 result.tar.gz
11:53:54 (1106): run_atlas exited; CPU time 45233.867260
11:53:54 (1106): called boinc_finish(0)

</stderr_txt>
]]>

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