Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:43:59 (4171186): wrapper (7.7.26015): starting
03:43:59 (4171186): wrapper: running run_atlas (--nthreads 3)
[2026-03-22 03:43:59] Arguments: --nthreads 3
[2026-03-22 03:43:59] Threads: 3
[2026-03-22 03:43:59] Checking for CVMFS
[2026-03-22 03:44:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-22 03:44:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-22 03:44:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-22 03:44:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-22 03:44:01] 2.9.2.0 4171382 0 30024 157560 3 1 28400998 36864000 0 130560 0 0 0.000 1337 6718 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-22 03:44:01] CVMFS is ok
[2026-03-22 03:44:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-22 03:44:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-22 03:44:01] Further information can be found at the LHC@home message board.
[2026-03-22 03:44:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-22 03:44:01] Checking for apptainer binary...
[2026-03-22 03:44:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-22 03:44:01] Running /usr/bin/apptainer --version
[2026-03-22 03:44:01] apptainer version 1.4.1-1.1
[2026-03-22 03:44:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-22 03:44:01] legendA257a
[2026-03-22 03:44:01] apptainer works
[2026-03-22 03:44:01] Set ATHENA_PROC_NUMBER=3
[2026-03-22 03:44:01] Set ATHENA_CORE_NUMBER=3
[2026-03-22 03:44:01] Starting ATLAS job with PandaID=7044616934
[2026-03-22 03:44:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-22 05:02:31]  *** The last 200 lines of the pilot log: ***
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,644 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-22 05:02:31] 2026-03-22 04:01:58,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,644 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-22 05:02:31] 2026-03-22 04:01:58,644 | INFO     | job 7044616934 has completed (purged errors)
[2026-03-22 05:02:31] 2026-03-22 04:01:58,644 | INFO     | overall cleanup function is called
[2026-03-22 05:02:31] 2026-03-22 04:01:59,650 | INFO     | --- collectZombieJob: --- 10, [4179907]
[2026-03-22 05:02:31] 2026-03-22 04:01:59,651 | INFO     | zombie collector waiting for pid 4179907
[2026-03-22 05:02:31] 2026-03-22 04:01:59,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-22 05:02:31] 2026-03-22 04:01:59,651 | INFO     | collected zombie processes
[2026-03-22 05:02:31] 2026-03-22 04:01:59,651 | INFO     | will attempt to kill all subprocesses of pid=4179907
[2026-03-22 05:02:31] 2026-03-22 04:01:59,691 | INFO     | process IDs to be killed: [4179907] (in reverse order)
[2026-03-22 05:02:31] 2026-03-22 04:01:59,716 | WARNING  | found no corresponding commands to process id(s)
[2026-03-22 05:02:31] 2026-03-22 04:01:59,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-22 05:02:31] 2026-03-22 04:01:59,718 | INFO     | did not find any defunct processes belonging to 4179907
[2026-03-22 05:02:31] 2026-03-22 04:01:59,719 | INFO     | did not find any defunct processes belonging to 4179907
[2026-03-22 05:02:31] 2026-03-22 04:01:59,719 | INFO     | ready for new job
[2026-03-22 05:02:31] 2026-03-22 04:01:59,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-22 05:02:31] 2026-03-22 04:01:59,720 | INFO     | **************************************
[2026-03-22 05:02:31] 2026-03-22 04:01:59,720 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-22 05:02:31] 2026-03-22 04:01:59,720 | INFO     | **************************************
[2026-03-22 05:02:31] 2026-03-22 04:01:59,720 | INFO     | 
[2026-03-22 05:02:31] 2026-03-22 04:01:59,720 | INFO     | architecture information:
[2026-03-22 05:02:31] 2026-03-22 04:01:59,720 | INFO     | executing command: cat /etc/os-release
[2026-03-22 05:02:31] 2026-03-22 04:01:59,730 | INFO     | cat /etc/os-release:
[2026-03-22 05:02:31] NAME="CentOS Linux"
[2026-03-22 05:02:31] VERSION="7 (Core)"
[2026-03-22 05:02:31] ID="centos"
[2026-03-22 05:02:31] ID_LIKE="rhel fedora"
[2026-03-22 05:02:31] VERSION_ID="7"
[2026-03-22 05:02:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-22 05:02:31] ANSI_COLOR="0;31"
[2026-03-22 05:02:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-22 05:02:31] HOME_URL="https://www.centos.org/"
[2026-03-22 05:02:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-22 05:02:31] 
[2026-03-22 05:02:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-22 05:02:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-22 05:02:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-22 05:02:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-22 05:02:31] 
[2026-03-22 05:02:31] 2026-03-22 04:01:59,730 | INFO     | **************************************
[2026-03-22 05:02:31] 2026-03-22 04:02:00,233 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-22 05:02:31] 2026-03-22 04:02:00,247 | INFO     | sufficient remaining disk space (377612140544 B)
[2026-03-22 05:02:31] 2026-03-22 04:02:00,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-22 05:02:31] 2026-03-22 04:02:00,247 | INFO     | current server update state: UPDATING_FINAL
[2026-03-22 05:02:31] 2026-03-22 04:02:00,247 | INFO     | update_server=False
[2026-03-22 05:02:31] 2026-03-22 04:02:00,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-22 05:02:31] 2026-03-22 04:02:00,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-22 05:02:31] 2026-03-22 04:02:00,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-22 05:02:31] 2026-03-22 04:02:00,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-22 05:02:31] 2026-03-22 04:02:00,719 | INFO     | aborting loop
[2026-03-22 05:02:31] 2026-03-22 04:02:00,898 | INFO     | all data control threads have been joined
[2026-03-22 05:02:31] 2026-03-22 04:02:01,164 | INFO     | all job control threads have been joined
[2026-03-22 05:02:31] 2026-03-22 04:02:01,253 | INFO     | [job] retrieve thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:01,253 | INFO     | [job] queue monitor thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:01,290 | INFO     | [payload] execute_payloads thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:01,346 | INFO     | all payload control threads have been joined
[2026-03-22 05:02:31] 2026-03-22 04:02:01,617 | INFO     | [payload] validate_post thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:01,724 | INFO     | [job] job monitor thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:01,839 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:01,899 | INFO     | [data] control thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:01,946 | INFO     | [job] validate thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:02,058 | INFO     | [payload] validate_pre thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:02,058 | INFO     | [job] create_data_payload thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:02,169 | INFO     | [job] control thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:02,218 | INFO     | [data] copytool_in thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:02,254 | INFO     | [data] copytool_out thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:02,318 | INFO     | [payload] failed_post thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:02,352 | INFO     | [payload] control thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:03,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-22 05:02:31] 2026-03-22 04:02:07,147 | INFO     | [data] queue_monitor thread has finished
[2026-03-22 05:02:31] 2026-03-22 04:02:23,965 | INFO     | [monitor] cgroup control has ended
[2026-03-22 05:02:31] 2026-03-22 04:02:25,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418110129984)>', '<ExcThread(monitor, started 140417102243584)>']
[2026-03-22 05:02:31] 2026-03-22 04:02:30,512 | INFO     | all workflow threads have been joined
[2026-03-22 05:02:31] 2026-03-22 04:02:30,512 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-22 05:02:31] 2026-03-22 04:02:30,513 | INFO     | traces error code: 0
[2026-03-22 05:02:31] 2026-03-22 04:02:30,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-22 05:02:31] 2026-03-22 04:02:30,920 | INFO     | PID=4175466 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-22 05:02:31] 2026-03-22 04:02:30,920 | INFO     | found 0 job(s) in 20 queues
[2026-03-22 05:02:31] 2026-03-22 04:02:30,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-22 05:02:31] 2026-03-22 04:02:30,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-22 05:02:31] 2026-03-22 04:02:30,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-22 05:02:31] 2026-03-22 04:02:30,920 | INFO     | [monitor] control thread has ended
[2026-03-22 05:02:31] 2026-03-22 04:02:30,967 [wrapper] ==== pilot stdout END ====
[2026-03-22 05:02:31] 2026-03-22 04:02:30,969 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-22 05:02:31] 2026-03-22 04:02:30,972 [wrapper] pilotpid: 4175466
[2026-03-22 05:02:31] 2026-03-22 04:02:30,974 [wrapper] Pilot exit status: 0
[2026-03-22 05:02:31] 2026-03-22 04:02:30,982 [wrapper] pandaids: 7044616934
[2026-03-22 05:02:31] 2026-03-22 04:02:30,998 [wrapper] cleanup supervisor_pilot 4185155 4175467
[2026-03-22 05:02:31] 2026-03-22 04:02:31,001 [wrapper] Test setup, not cleaning
[2026-03-22 05:02:31] 2026-03-22 04:02:31,003 [wrapper] apfmon messages muted
[2026-03-22 05:02:31] 2026-03-22 04:02:31,006 [wrapper] ==== wrapper stdout END ====
[2026-03-22 05:02:31] 2026-03-22 04:02:31,008 [wrapper] ==== wrapper stderr END ====
[2026-03-22 05:02:31]  *** Error codes and diagnostics ***
[2026-03-22 05:02:31]     "exeErrorCode": 0,
[2026-03-22 05:02:31]     "exeErrorDiag": "",
[2026-03-22 05:02:31]     "pilotErrorCode": 0,
[2026-03-22 05:02:31]     "pilotErrorDiag": "",
[2026-03-22 05:02:31]  *** Listing of results directory ***
[2026-03-22 05:02:31] total 613228
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc    585013 Mar 13 17:09 pilot3.tar.gz
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc      5111 Mar 13 17:10 queuedata.json
[2026-03-22 05:02:31] -rwx------ 1 boinc boinc     36322 Mar 13 17:11 runpilot2-wrapper.sh
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc       100 Mar 22 03:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-22 05:02:31] -rwxr-xr-x 1 boinc boinc      7986 Mar 22 03:43 run_atlas
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc       105 Mar 22 03:43 job.xml
[2026-03-22 05:02:31] -rw-r--r-- 2 boinc boinc 439815992 Mar 22 03:43 EVNT.46701403._002411.pool.root.1
[2026-03-22 05:02:31] -rw-r--r-- 2 boinc boinc    597536 Mar 22 03:43 input.tar.gz
[2026-03-22 05:02:31] -rw-r--r-- 2 boinc boinc     15845 Mar 22 03:43 start_atlas.sh
[2026-03-22 05:02:31] drwxrwx--x 2 boinc boinc      4096 Mar 22 03:43 shared
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc         0 Mar 22 03:43 boinc_setup_complete
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc      6449 Mar 22 03:43 init_data.xml
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc         0 Mar 22 03:43 boinc_lockfile
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc      2571 Mar 22 03:44 pandaJob.out
[2026-03-22 05:02:31] -rw------- 1 boinc boinc   1010647 Mar 22 03:44 agis_schedconf.cvmfs.json
[2026-03-22 05:02:31] -rw------- 1 boinc boinc   1511579 Mar 22 03:44 agis_ddmendpoints.agis.ALL.json
[2026-03-22 05:02:31] -rw------- 1 boinc boinc       427 Mar 22 03:44 workernode_map.json
[2026-03-22 05:02:31] drwx------ 5 boinc boinc      4096 Mar 22 03:44 pilot3
[2026-03-22 05:02:31] -rw------- 1 boinc boinc 182308866 Mar 22 05:01 HITS.48955015._017780.pool.root.1
[2026-03-22 05:02:31] -rw------- 1 boinc boinc        95 Mar 22 05:01 pilot_heartbeat.json
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc       530 Mar 22 05:01 boinc_task_state.xml
[2026-03-22 05:02:31] -rw------- 1 boinc boinc      1012 Mar 22 05:01 memory_monitor_summary.json
[2026-03-22 05:02:31] -rw------- 1 boinc boinc    263102 Mar 22 05:01 log.48955015._017780.job.log.tgz.1
[2026-03-22 05:02:31] -rw------- 1 boinc boinc      6307 Mar 22 05:01 heartbeat.json
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc        27 Mar 22 05:02 wrapper_checkpoint.txt
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc      8192 Mar 22 05:02 boinc_mmap_file
[2026-03-22 05:02:31] -rw------- 1 boinc boinc       747 Mar 22 05:02 pilotlog.txt
[2026-03-22 05:02:31] -rw------- 1 boinc boinc    686930 Mar 22 05:02 log.48955015._017780.job.log.1
[2026-03-22 05:02:31] -rw------- 1 boinc boinc       357 Mar 22 05:02 output.list
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc       620 Mar 22 05:02 runtime_log
[2026-03-22 05:02:31] -rw------- 1 boinc boinc    962560 Mar 22 05:02 result.tar.gz
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc      8921 Mar 22 05:02 runtime_log.err
[2026-03-22 05:02:31] -rw------- 1 boinc boinc       662 Mar 22 05:02 3H9KDmUHKL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmq2pLDmoU36fn.diag
[2026-03-22 05:02:31] -rw-r--r-- 1 boinc boinc     12235 Mar 22 05:02 stderr.txt
[2026-03-22 05:02:31] HITS file was successfully produced:
[2026-03-22 05:02:31] -rw------- 1 boinc boinc 182308866 Mar 22 05:01 shared/HITS.pool.root.1
[2026-03-22 05:02:31]  *** Contents of shared directory: ***
[2026-03-22 05:02:31] total 609096
[2026-03-22 05:02:31] -rw-r--r-- 2 boinc boinc 439815992 Mar 22 03:43 ATLAS.root_0
[2026-03-22 05:02:31] -rw-r--r-- 2 boinc boinc    597536 Mar 22 03:43 input.tar.gz
[2026-03-22 05:02:31] -rw-r--r-- 2 boinc boinc     15845 Mar 22 03:43 start_atlas.sh
[2026-03-22 05:02:31] -rw------- 1 boinc boinc 182308866 Mar 22 05:01 HITS.pool.root.1
[2026-03-22 05:02:31] -rw------- 1 boinc boinc    962560 Mar 22 05:02 result.tar.gz
05:02:32 (4171186): run_atlas exited; CPU time 12996.893207
05:02:32 (4171186): called boinc_finish(0)

</stderr_txt>
]]>

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