Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
15:09:36 (14208): wrapper (7.7.26015): starting
15:09:36 (14208): wrapper: running run_atlas (--nthreads 4)
[2026-03-21 15:09:36] Arguments: --nthreads 4
[2026-03-21 15:09:36] Threads: 4
[2026-03-21 15:09:36] Checking for CVMFS
[2026-03-21 15:09:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-21 15:09:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-21 15:09:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-21 15:09:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-21 15:09:43] 2.13.3.0 14421 0 24520 157548 3 1 35402 4096000 0 130560 0 0 0.000 1337 379 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-21 15:09:43] CVMFS is ok
[2026-03-21 15:09:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-21 15:09:43] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-21 15:09:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-21 15:09:43] Further information can be found at the LHC@home message board.
[2026-03-21 15:09:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-21 15:09:43] Checking for apptainer binary...
[2026-03-21 15:09:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-21 15:09:43] Running /usr/bin/apptainer --version
[2026-03-21 15:09:43] apptainer version 1.4.5
[2026-03-21 15:09:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-21 15:09:45] T3500-Ubuntu
[2026-03-21 15:09:45] apptainer works
[2026-03-21 15:09:45] Set ATHENA_PROC_NUMBER=4
[2026-03-21 15:09:45] Set ATHENA_CORE_NUMBER=4
[2026-03-21 15:09:45] Starting ATLAS job with PandaID=7056970025
[2026-03-21 15:09:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 21:43:37]  *** The last 200 lines of the pilot log: ***
[2026-03-21 21:43:37] 2026-03-22 01:42:33,955 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-21 21:43:37] 2026-03-22 01:42:34,019 | INFO     | job 7056970025 has state=finished
[2026-03-21 21:43:37] 2026-03-22 01:42:34,019 | INFO     | preparing for final server update for job 7056970025 in state='finished'
[2026-03-21 21:43:37] 2026-03-22 01:42:34,020 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7056970025/jobReport.json
[2026-03-21 21:43:37] 2026-03-22 01:42:34,020 | INFO     | monitor loop #1773: job 0:7056970025 is in state 'finished'
[2026-03-21 21:43:37] 2026-03-22 01:42:34,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,022 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/10/workernode_map.json
[2026-03-21 21:43:37] 2026-03-22 01:42:34,022 | INFO     | this job has now completed (state=finished)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,022 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,022 | INFO     | log transfer has been attempted: DONE
[2026-03-21 21:43:37] 2026-03-22 01:42:34,022 | INFO     | job 7056970025 has finished - writing final server update
[2026-03-21 21:43:37] 2026-03-22 01:42:34,023 | INFO     | total number of processed events: 400 (read)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,027 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7056970025/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,028 | INFO     | extracted standard info from prmon json
[2026-03-21 21:43:37] 2026-03-22 01:42:34,028 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 21:43:37] 2026-03-22 01:42:34,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 21:43:37] 2026-03-22 01:42:34,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-21 21:43:37] 2026-03-22 01:42:34,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-21 21:43:37] 2026-03-22 01:42:34,033 | INFO     | fitting pss+swap vs Time
[2026-03-21 21:43:37] 2026-03-22 01:42:34,033 | INFO     | sum of square deviations: 17695289920.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,036 | INFO     | sum of deviations: 22725115741.00005
[2026-03-21 21:43:37] 2026-03-22 01:42:34,036 | INFO     | mean x: 1774132008.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,036 | INFO     | mean y: 2367449.2337662335
[2026-03-21 21:43:37] 2026-03-22 01:42:34,036 | INFO     | intersect: -2276055532.468521
[2026-03-21 21:43:37] 2026-03-22 01:42:34,036 | INFO     | chi2: 3.661071881795224
[2026-03-21 21:43:37] 2026-03-22 01:42:34,037 | INFO     | sum of square deviations: 17014774835.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,039 | INFO     | sum of deviations: 47931203199.50002
[2026-03-21 21:43:37] 2026-03-22 01:42:34,039 | INFO     | mean x: 1774131855.5
[2026-03-21 21:43:37] 2026-03-22 01:42:34,039 | INFO     | mean y: 2373037.902631579
[2026-03-21 21:43:37] 2026-03-22 01:42:34,040 | INFO     | intersect: -4995417135.244641
[2026-03-21 21:43:37] 2026-03-22 01:42:34,040 | INFO     | chi2: 2.8249939274375637
[2026-03-21 21:43:37] 2026-03-22 01:42:34,040 | INFO     | current chi2=2.8249939274375637 (change=22.83697183098425 %)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,040 | INFO     | right removable region: 379
[2026-03-21 21:43:37] 2026-03-22 01:42:34,040 | INFO     | sum of square deviations: 17014774835.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,043 | INFO     | sum of deviations: -71460948529.5
[2026-03-21 21:43:37] 2026-03-22 01:42:34,043 | INFO     | mean x: 1774132160.5
[2026-03-21 21:43:37] 2026-03-22 01:42:34,043 | INFO     | mean y: 2388511.392105263
[2026-03-21 21:43:37] 2026-03-22 01:42:34,043 | INFO     | intersect: 7453628285.968948
[2026-03-21 21:43:37] 2026-03-22 01:42:34,044 | INFO     | chi2: 1.0731154578604591
[2026-03-21 21:43:37] 2026-03-22 01:42:34,044 | INFO     | current chi2=1.0731154578604591 (change=70.68848980549784 %)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,044 | INFO     | sum of square deviations: 16351934500.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,046 | INFO     | sum of deviations: -88853362683.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,046 | INFO     | mean x: 1774132313.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,046 | INFO     | mean y: 2392512.024
[2026-03-21 21:43:37] 2026-03-22 01:42:34,046 | INFO     | intersect: 9642696651.856426
[2026-03-21 21:43:37] 2026-03-22 01:42:34,046 | INFO     | chi2: 0.9507814383674507
[2026-03-21 21:43:37] 2026-03-22 01:42:34,047 | INFO     | current chi2=0.9507814383674507 (change=11.399893515364495 %)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,047 | INFO     | left removable region: 20
[2026-03-21 21:43:37] 2026-03-22 01:42:34,047 | INFO     | sum of square deviations: 14346910860.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,049 | INFO     | sum of deviations: -59771574985.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,049 | INFO     | mean x: 1774132435.0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,049 | INFO     | mean y: 2397888.5264623957
[2026-03-21 21:43:37] 2026-03-22 01:42:34,049 | INFO     | intersect: 7393723513.025613
[2026-03-21 21:43:37] 2026-03-22 01:42:34,049 | INFO     | chi2: 0.0824512289644742
[2026-03-21 21:43:37] 2026-03-22 01:42:34,049 | INFO     | current memory leak: -4.17 B/s (using 359 data points, chi2=0.08)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,049 | INFO     | could have reported an average CPU frequency of 3198 MHz (17 samples)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | ..............................
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . Timing measurements:
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . get job = 0 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . initial setup = 25 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . payload setup = 20 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . stage-in = 0 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . payload execution = 23454 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . stage-out = 2 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | . log creation = 0 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,050 | INFO     | ..............................
[2026-03-21 21:43:37] 2026-03-22 01:42:34,115 | INFO     | 
[2026-03-21 21:43:37] 2026-03-22 01:42:34,115 | INFO     | job summary report
[2026-03-21 21:43:37] 2026-03-22 01:42:34,115 | INFO     | --------------------------------------------------
[2026-03-21 21:43:37] 2026-03-22 01:42:34,115 | INFO     | PanDA job id: 7056970025
[2026-03-21 21:43:37] 2026-03-22 01:42:34,115 | INFO     | task id: 49180657
[2026-03-21 21:43:37] 2026-03-22 01:42:34,115 | INFO     | errors: (none)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | pilot state: finished 
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | transexitcode: 0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | exeerrorcode: 0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | exeerrordiag: 
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | exitcode: 0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | exitmsg: OK
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | cpuconsumptiontime: 90490 s
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | nevents: 400
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | neventsw: 0
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | pid: 23394
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | pgrp: 23394
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | corecount: 4
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | event service: False
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | sizes: {0: 2279208, 1: 2279908, 2: 2280369, 12: 2280369, 23478: 2315372, 23481: 2324400, 23482: 2324842}
[2026-03-21 21:43:37] 2026-03-22 01:42:34,116 | INFO     | --------------------------------------------------
[2026-03-21 21:43:37] 2026-03-22 01:42:34,117 | INFO     | 
[2026-03-21 21:43:37] 2026-03-22 01:42:34,117 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/10
[2026-03-21 21:43:37] 2026-03-22 01:42:34,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,135 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 21:43:37] 2026-03-22 01:42:34,137 | INFO     | job 7056970025 has completed (purged errors)
[2026-03-21 21:43:37] 2026-03-22 01:42:34,137 | INFO     | overall cleanup function is called
[2026-03-21 21:43:37] 2026-03-22 01:42:35,145 | INFO     | --- collectZombieJob: --- 10, [23394]
[2026-03-21 21:43:37] 2026-03-22 01:42:35,145 | INFO     | zombie collector waiting for pid 23394
[2026-03-21 21:43:37] 2026-03-22 01:42:35,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 21:43:37] 2026-03-22 01:42:35,145 | INFO     | collected zombie processes
[2026-03-21 21:43:37] 2026-03-22 01:42:35,145 | INFO     | will attempt to kill all subprocesses of pid=23394
[2026-03-21 21:43:37] 2026-03-22 01:42:35,284 | INFO     | process IDs to be killed: [23394] (in reverse order)
[2026-03-21 21:43:37] 2026-03-22 01:42:35,336 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 21:43:37] 2026-03-22 01:42:35,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 21:43:37] 2026-03-22 01:42:35,341 | INFO     | did not find any defunct processes belonging to 23394
[2026-03-21 21:43:37] 2026-03-22 01:42:35,344 | INFO     | did not find any defunct processes belonging to 23394
[2026-03-21 21:43:37] 2026-03-22 01:42:35,344 | INFO     | ready for new job
[2026-03-21 21:43:37] 2026-03-22 01:42:35,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 21:43:37] 2026-03-22 01:42:35,346 | INFO     | **************************************
[2026-03-21 21:43:37] 2026-03-22 01:42:35,346 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 21:43:37] 2026-03-22 01:42:35,346 | INFO     | **************************************
[2026-03-21 21:43:37] 2026-03-22 01:42:35,346 | INFO     | 
[2026-03-21 21:43:37] 2026-03-22 01:42:35,348 | INFO     | architecture information:
[2026-03-21 21:43:37] 2026-03-22 01:42:35,348 | INFO     | executing command: cat /etc/os-release
[2026-03-21 21:43:37] 2026-03-22 01:42:35,363 | INFO     | cat /etc/os-release:
[2026-03-21 21:43:37] NAME="CentOS Linux"
[2026-03-21 21:43:37] VERSION="7 (Core)"
[2026-03-21 21:43:37] ID="centos"
[2026-03-21 21:43:37] ID_LIKE="rhel fedora"
[2026-03-21 21:43:37] VERSION_ID="7"
[2026-03-21 21:43:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 21:43:37] ANSI_COLOR="0;31"
[2026-03-21 21:43:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 21:43:37] HOME_URL="https://www.centos.org/"
[2026-03-21 21:43:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 21:43:37] 
[2026-03-21 21:43:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 21:43:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 21:43:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 21:43:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 21:43:37] 
[2026-03-21 21:43:37] 2026-03-22 01:42:35,363 | INFO     | **************************************
[2026-03-21 21:43:37] 2026-03-22 01:42:35,866 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/10
[2026-03-21 21:43:37] 2026-03-22 01:42:35,881 | INFO     | sufficient remaining disk space (413047717888 B)
[2026-03-21 21:43:37] 2026-03-22 01:42:35,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 21:43:37] 2026-03-22 01:42:35,881 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 21:43:37] 2026-03-22 01:42:35,881 | INFO     | update_server=False
[2026-03-21 21:43:37] 2026-03-22 01:42:35,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 21:43:37] 2026-03-22 01:42:35,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 21:43:37] 2026-03-22 01:42:35,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 21:43:37] 2026-03-22 01:42:35,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 21:43:37] 2026-03-22 01:42:35,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 21:43:37] 2026-03-22 01:42:35,883 | INFO     | aborting loop
[2026-03-21 21:43:37] 2026-03-22 01:42:36,462 | INFO     | all data control threads have been joined
[2026-03-21 21:43:37] 2026-03-22 01:42:36,517 | INFO     | all job control threads have been joined
[2026-03-21 21:43:37] 2026-03-22 01:42:36,648 | INFO     | all payload control threads have been joined
[2026-03-21 21:43:37] 2026-03-22 01:42:36,886 | INFO     | [job] retrieve thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:36,887 | INFO     | [job] queue monitor thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:36,888 | INFO     | [job] job monitor thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:36,901 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,147 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,149 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,467 | INFO     | [payload] failed_post thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,467 | INFO     | [data] control thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,519 | INFO     | [job] control thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,654 | INFO     | [payload] control thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,887 | INFO     | [data] copytool_out thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:37,910 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:38,116 | INFO     | [job] validate thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:38,126 | INFO     | [data] copytool_in thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:38,473 | INFO     | [payload] validate_post thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:42:39,888 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 21:43:37] 2026-03-22 01:43:06,890 | INFO     | PID=18689 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-21 21:43:37] 2026-03-22 01:43:06,897 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 21:43:37] 2026-03-22 01:43:06,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 21:43:37] 2026-03-22 01:43:06,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 21:43:37] 2026-03-22 01:43:30,666 | INFO     | [monitor] cgroup control has ended
[2026-03-21 21:43:37] 2026-03-22 01:43:31,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139289928124224)>', '<ExcThread(monitor, started 139288977061632)>']
[2026-03-21 21:43:37] 2026-03-22 01:43:32,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 21:43:37] 2026-03-22 01:43:32,023 | INFO     | [monitor] control thread has ended
[2026-03-21 21:43:37] 2026-03-22 01:43:36,792 | INFO     | all workflow threads have been joined
[2026-03-21 21:43:37] 2026-03-22 01:43:36,793 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 21:43:37] 2026-03-22 01:43:36,793 | INFO     | traces error code: 0
[2026-03-21 21:43:37] 2026-03-22 01:43:36,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 21:43:37] 2026-03-22 01:43:36,892 [wrapper] ==== pilot stdout END ====
[2026-03-21 21:43:37] 2026-03-22 01:43:36,894 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 21:43:37] 2026-03-22 01:43:36,897 [wrapper] pilotpid: 18689
[2026-03-21 21:43:37] 2026-03-22 01:43:36,899 [wrapper] Pilot exit status: 0
[2026-03-21 21:43:37] 2026-03-22 01:43:36,979 [wrapper] pandaids: 7056970025
[2026-03-21 21:43:37] 2026-03-22 01:43:37,013 [wrapper] cleanup supervisor_pilot   62450 18690
[2026-03-21 21:43:37] 2026-03-22 01:43:37,016 [wrapper] Test setup, not cleaning
[2026-03-21 21:43:37] 2026-03-22 01:43:37,018 [wrapper] apfmon messages muted
[2026-03-21 21:43:37] 2026-03-22 01:43:37,020 [wrapper] ==== wrapper stdout END ====
[2026-03-21 21:43:37] 2026-03-22 01:43:37,023 [wrapper] ==== wrapper stderr END ====
[2026-03-21 21:43:37]  *** Error codes and diagnostics ***
[2026-03-21 21:43:37]     "exeErrorCode": 0,
[2026-03-21 21:43:37]     "exeErrorDiag": "",
[2026-03-21 21:43:37]     "pilotErrorCode": 0,
[2026-03-21 21:43:37]     "pilotErrorDiag": "",
[2026-03-21 21:43:37]  *** Listing of results directory ***
[2026-03-21 21:43:37] total 502764
[2026-03-21 21:43:37] -rwx------ 1 whitlerd whitlerd     36322 Mar 16 12:42 runpilot2-wrapper.sh
[2026-03-21 21:43:37] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 16 12:45 queuedata.json
[2026-03-21 21:43:37] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 16 12:45 pilot3.tar.gz
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 21 15:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 21:43:37] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 21 15:09 run_atlas
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 21 15:09 job.xml
[2026-03-21 21:43:37] -rw-r--r-- 2 whitlerd whitlerd 249405923 Mar 21 15:09 EVNT.49133633._000029.pool.root.1
[2026-03-21 21:43:37] -rw-r--r-- 2 whitlerd whitlerd    597544 Mar 21 15:09 input.tar.gz
[2026-03-21 21:43:37] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 21 15:09 start_atlas.sh
[2026-03-21 21:43:37] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 21 15:09 shared
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 21 15:09 boinc_setup_complete
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd      9200 Mar 21 15:09 init_data.xml
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 21 15:09 boinc_lockfile
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd      2614 Mar 21 15:09 pandaJob.out
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd   1010663 Mar 21 15:10 agis_schedconf.cvmfs.json
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd       437 Mar 21 15:10 workernode_map.json
[2026-03-21 21:43:37] drwx------ 5 whitlerd whitlerd      4096 Mar 21 15:10 pilot3
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd 253833528 Mar 21 21:41 HITS.49180657._000717.pool.root.1
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 21 21:42 boinc_task_state.xml
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd      1043 Mar 21 21:42 memory_monitor_summary.json
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd   1511579 Mar 21 21:42 agis_ddmendpoints.agis.ALL.json
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd    536021 Mar 21 21:42 log.49180657._000717.job.log.tgz.1
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd        95 Mar 21 21:42 pilot_heartbeat.json
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd      6345 Mar 21 21:42 heartbeat.json
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 21 21:43 boinc_mmap_file
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 21 21:43 wrapper_checkpoint.txt
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd      4758 Mar 21 21:43 pilotlog.txt
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd   3284477 Mar 21 21:43 log.49180657._000717.job.log.1
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd       357 Mar 21 21:43 output.list
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 21 21:43 runtime_log
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd   3840000 Mar 21 21:43 result.tar.gz
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar 21 21:43 runtime_log.err
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd       655 Mar 21 21:43 PnJMDmlCQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTOvLDmvDr6No.diag
[2026-03-21 21:43:37] -rw-rw-r-- 1 whitlerd whitlerd     21401 Mar 21 21:43 stderr.txt
[2026-03-21 21:43:37] HITS file was successfully produced:
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd 253833528 Mar 21 21:41 shared/HITS.pool.root.1
[2026-03-21 21:43:37]  *** Contents of shared directory: ***
[2026-03-21 21:43:37] total 495812
[2026-03-21 21:43:37] -rw-r--r-- 2 whitlerd whitlerd 249405923 Mar 21 15:09 ATLAS.root_0
[2026-03-21 21:43:37] -rw-r--r-- 2 whitlerd whitlerd    597544 Mar 21 15:09 input.tar.gz
[2026-03-21 21:43:37] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 21 15:09 start_atlas.sh
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd 253833528 Mar 21 21:41 HITS.pool.root.1
[2026-03-21 21:43:37] -rw------- 1 whitlerd whitlerd   3840000 Mar 21 21:43 result.tar.gz
21:43:38 (14208): run_atlas exited; CPU time 90821.264430
21:43:38 (14208): called boinc_finish(0)

</stderr_txt>
]]>

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