Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
09:15:04 (2580858): wrapper (7.7.26015): starting
09:15:04 (2580858): wrapper: running run_atlas (--nthreads 4)
[2026-03-21 09:15:04] Arguments: --nthreads 4
[2026-03-21 09:15:04] Threads: 4
[2026-03-21 09:15:04] Checking for CVMFS
[2026-03-21 09:15:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-21 09:15:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-21 09:15:05] Running cvmfs_config stat atlas.cern.ch
[2026-03-21 09:15:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-21 09:15:05] 2.13.3.0 2266864 1399 49796 157540 2 11 2723412 4096001 2748 130560 0 803966 99.985 53440 1215 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-21 09:15:05] CVMFS is ok
[2026-03-21 09:15:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-21 09:15:05] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-21 09:15:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-21 09:15:05] Further information can be found at the LHC@home message board.
[2026-03-21 09:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-21 09:15:05] Checking for apptainer binary...
[2026-03-21 09:15:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-21 09:15:05] Running /usr/bin/apptainer --version
[2026-03-21 09:15:05] apptainer version 1.4.5
[2026-03-21 09:15:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-21 09:15:05] P9X79
[2026-03-21 09:15:05] apptainer works
[2026-03-21 09:15:05] Set ATHENA_PROC_NUMBER=4
[2026-03-21 09:15:05] Set ATHENA_CORE_NUMBER=4
[2026-03-21 09:15:05] Starting ATLAS job with PandaID=7053192075
[2026-03-21 09:15:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 13:11:54]  *** The last 200 lines of the pilot log: ***
[2026-03-21 13:11:54] 2026-03-21 17:10:50,524 | INFO     | job 7053192075 has state=finished
[2026-03-21 13:11:54] 2026-03-21 17:10:50,525 | INFO     | preparing for final server update for job 7053192075 in state='finished'
[2026-03-21 13:11:54] 2026-03-21 17:10:50,525 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/1/PanDA_Pilot-7053192075/jobReport.json
[2026-03-21 13:11:54] 2026-03-21 17:10:50,526 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/1/workernode_map.json
[2026-03-21 13:11:54] 2026-03-21 17:10:50,527 | INFO     | this job has now completed (state=finished)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,527 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,527 | INFO     | log transfer has been attempted: DONE
[2026-03-21 13:11:54] 2026-03-21 17:10:50,527 | INFO     | job 7053192075 has finished - writing final server update
[2026-03-21 13:11:54] 2026-03-21 17:10:50,527 | INFO     | total number of processed events: 400 (read)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,530 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/1/PanDA_Pilot-7053192075/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,530 | INFO     | extracted standard info from prmon json
[2026-03-21 13:11:54] 2026-03-21 17:10:50,530 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 13:11:54] 2026-03-21 17:10:50,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 13:11:54] 2026-03-21 17:10:50,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-21 13:11:54] 2026-03-21 17:10:50,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-21 13:11:54] 2026-03-21 17:10:50,533 | INFO     | fitting pss+swap vs Time
[2026-03-21 13:11:54] 2026-03-21 17:10:50,534 | INFO     | sum of square deviations: 3871990738.0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,535 | INFO     | sum of deviations: -80673164290.0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,535 | INFO     | mean x: 1774105986.5
[2026-03-21 13:11:54] 2026-03-21 17:10:50,535 | INFO     | mean y: 2379388.3362068967
[2026-03-21 13:11:54] 2026-03-21 17:10:50,535 | INFO     | intersect: 36965986328.86165
[2026-03-21 13:11:54] 2026-03-21 17:10:50,535 | INFO     | chi2: 2.7261174885204924
[2026-03-21 13:11:54] 2026-03-21 17:10:50,536 | INFO     | sum of square deviations: 3627000098.0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,537 | INFO     | sum of deviations: -64984775163.000015
[2026-03-21 13:11:54] 2026-03-21 17:10:50,537 | INFO     | mean x: 1774105834.0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,537 | INFO     | mean y: 2389011.2466960354
[2026-03-21 13:11:54] 2026-03-21 17:10:50,537 | INFO     | intersect: 31788952458.38577
[2026-03-21 13:11:54] 2026-03-21 17:10:50,537 | INFO     | chi2: 2.068771163609765
[2026-03-21 13:11:54] 2026-03-21 17:10:50,538 | INFO     | current chi2=2.068771163609765 (change=24.11291250941204 %)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,538 | INFO     | right removable region: 226
[2026-03-21 13:11:54] 2026-03-21 17:10:50,538 | INFO     | sum of square deviations: 3627000098.0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,539 | INFO     | sum of deviations: -114899008971.00002
[2026-03-21 13:11:54] 2026-03-21 17:10:50,539 | INFO     | mean x: 1774106139.0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,539 | INFO     | mean y: 2400483.1453744494
[2026-03-21 13:11:54] 2026-03-21 17:10:50,539 | INFO     | intersect: 56203953191.365685
[2026-03-21 13:11:54] 2026-03-21 17:10:50,540 | INFO     | chi2: 1.1678279798109028
[2026-03-21 13:11:54] 2026-03-21 17:10:50,540 | INFO     | current chi2=1.1678279798109028 (change=57.16149488316068 %)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,540 | INFO     | sum of square deviations: 3392567795.5
[2026-03-21 13:11:54] 2026-03-21 17:10:50,541 | INFO     | sum of deviations: -108891568510.5
[2026-03-21 13:11:54] 2026-03-21 17:10:50,541 | INFO     | mean x: 1774106291.5
[2026-03-21 13:11:54] 2026-03-21 17:10:50,541 | INFO     | mean y: 2396564.3198198196
[2026-03-21 13:11:54] 2026-03-21 17:10:50,541 | INFO     | intersect: 56946053531.77314
[2026-03-21 13:11:54] 2026-03-21 17:10:50,541 | INFO     | chi2: 1.165724272339439
[2026-03-21 13:11:54] 2026-03-21 17:10:50,542 | INFO     | current chi2=1.165724272339439 (change=0.18013847140436381 %)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,542 | INFO     | left removable region: 20
[2026-03-21 13:11:54] 2026-03-21 17:10:50,542 | INFO     | sum of square deviations: 2710627567.5
[2026-03-21 13:11:54] 2026-03-21 17:10:50,543 | INFO     | sum of deviations: -74065552515.5
[2026-03-21 13:11:54] 2026-03-21 17:10:50,543 | INFO     | mean x: 1774106413.5
[2026-03-21 13:11:54] 2026-03-21 17:10:50,543 | INFO     | mean y: 2393635.160194175
[2026-03-21 13:11:54] 2026-03-21 17:10:50,543 | INFO     | intersect: 48478316079.334045
[2026-03-21 13:11:54] 2026-03-21 17:10:50,543 | INFO     | chi2: 0.46557670272730173
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | current memory leak: -27.32 B/s (using 206 data points, chi2=0.47)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | could have reported an average CPU frequency of 2696 MHz (11 samples)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | ..............................
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | . Timing measurements:
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | . get job = 0 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | . initial setup = 7 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | . payload setup = 9 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | . stage-in = 0 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,544 | INFO     | . payload execution = 14107 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,545 | INFO     | . stage-out = 2 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,545 | INFO     | . log creation = 0 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,545 | INFO     | ..............................
[2026-03-21 13:11:54] 2026-03-21 17:10:50,602 | INFO     | 
[2026-03-21 13:11:54] 2026-03-21 17:10:50,602 | INFO     | job summary report
[2026-03-21 13:11:54] 2026-03-21 17:10:50,602 | INFO     | --------------------------------------------------
[2026-03-21 13:11:54] 2026-03-21 17:10:50,602 | INFO     | PanDA job id: 7053192075
[2026-03-21 13:11:54] 2026-03-21 17:10:50,602 | INFO     | task id: 48967085
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | errors: (none)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | pilot state: finished 
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | transexitcode: 0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | exeerrorcode: 0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | exeerrordiag: 
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | exitcode: 0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | exitmsg: OK
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | cpuconsumptiontime: 54573 s
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | nevents: 400
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | neventsw: 0
[2026-03-21 13:11:54] 2026-03-21 17:10:50,603 | INFO     | pid: 2589588
[2026-03-21 13:11:54] 2026-03-21 17:10:50,604 | INFO     | pgrp: 2589588
[2026-03-21 13:11:54] 2026-03-21 17:10:50,604 | INFO     | corecount: 4
[2026-03-21 13:11:54] 2026-03-21 17:10:50,604 | INFO     | event service: False
[2026-03-21 13:11:54] 2026-03-21 17:10:50,604 | INFO     | sizes: {0: 2279767, 1: 2280284, 2: 2280284, 14119: 2310951, 14121: 2320033, 14122: 2320171}
[2026-03-21 13:11:54] 2026-03-21 17:10:50,604 | INFO     | --------------------------------------------------
[2026-03-21 13:11:54] 2026-03-21 17:10:50,604 | INFO     | 
[2026-03-21 13:11:54] 2026-03-21 17:10:50,604 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/1
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,618 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 13:11:54] 2026-03-21 17:10:50,618 | INFO     | job 7053192075 has completed (purged errors)
[2026-03-21 13:11:54] 2026-03-21 17:10:50,618 | INFO     | overall cleanup function is called
[2026-03-21 13:11:54] 2026-03-21 17:10:51,625 | INFO     | --- collectZombieJob: --- 10, [2589588]
[2026-03-21 13:11:54] 2026-03-21 17:10:51,625 | INFO     | zombie collector waiting for pid 2589588
[2026-03-21 13:11:54] 2026-03-21 17:10:51,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 13:11:54] 2026-03-21 17:10:51,625 | INFO     | collected zombie processes
[2026-03-21 13:11:54] 2026-03-21 17:10:51,625 | INFO     | will attempt to kill all subprocesses of pid=2589588
[2026-03-21 13:11:54] 2026-03-21 17:10:51,773 | INFO     | process IDs to be killed: [2589588] (in reverse order)
[2026-03-21 13:11:54] 2026-03-21 17:10:51,811 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 13:11:54] 2026-03-21 17:10:51,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 13:11:54] 2026-03-21 17:10:51,814 | INFO     | did not find any defunct processes belonging to 2589588
[2026-03-21 13:11:54] 2026-03-21 17:10:51,817 | INFO     | did not find any defunct processes belonging to 2589588
[2026-03-21 13:11:54] 2026-03-21 17:10:51,818 | INFO     | ready for new job
[2026-03-21 13:11:54] 2026-03-21 17:10:51,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 13:11:54] 2026-03-21 17:10:51,820 | INFO     | **************************************
[2026-03-21 13:11:54] 2026-03-21 17:10:51,820 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 13:11:54] 2026-03-21 17:10:51,820 | INFO     | **************************************
[2026-03-21 13:11:54] 2026-03-21 17:10:51,820 | INFO     | 
[2026-03-21 13:11:54] 2026-03-21 17:10:51,821 | INFO     | architecture information:
[2026-03-21 13:11:54] 2026-03-21 17:10:51,822 | INFO     | executing command: cat /etc/os-release
[2026-03-21 13:11:54] 2026-03-21 17:10:51,830 | INFO     | cat /etc/os-release:
[2026-03-21 13:11:54] NAME="CentOS Linux"
[2026-03-21 13:11:54] VERSION="7 (Core)"
[2026-03-21 13:11:54] ID="centos"
[2026-03-21 13:11:54] ID_LIKE="rhel fedora"
[2026-03-21 13:11:54] VERSION_ID="7"
[2026-03-21 13:11:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 13:11:54] ANSI_COLOR="0;31"
[2026-03-21 13:11:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 13:11:54] HOME_URL="https://www.centos.org/"
[2026-03-21 13:11:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 13:11:54] 
[2026-03-21 13:11:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 13:11:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 13:11:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 13:11:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 13:11:54] 
[2026-03-21 13:11:54] 2026-03-21 17:10:51,830 | INFO     | **************************************
[2026-03-21 13:11:54] 2026-03-21 17:10:52,333 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/1
[2026-03-21 13:11:54] 2026-03-21 17:10:52,343 | INFO     | sufficient remaining disk space (81490083840 B)
[2026-03-21 13:11:54] 2026-03-21 17:10:52,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 13:11:54] 2026-03-21 17:10:52,344 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 13:11:54] 2026-03-21 17:10:52,344 | INFO     | update_server=False
[2026-03-21 13:11:54] 2026-03-21 17:10:52,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 13:11:54] 2026-03-21 17:10:52,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 13:11:54] 2026-03-21 17:10:52,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 13:11:54] 2026-03-21 17:10:52,488 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-21 13:11:54] 2026-03-21 17:10:52,489 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-21 13:11:54] 2026-03-21 17:10:52,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 13:11:54] 2026-03-21 17:10:52,489 | INFO     | will abort loop
[2026-03-21 13:11:54] 2026-03-21 17:10:53,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 13:11:54] 2026-03-21 17:10:53,194 | INFO     | all job control threads have been joined
[2026-03-21 13:11:54] 2026-03-21 17:10:53,328 | INFO     | all payload control threads have been joined
[2026-03-21 13:11:54] 2026-03-21 17:10:53,349 | INFO     | [job] retrieve thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:53,350 | INFO     | [job] queue monitor thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:53,396 | INFO     | all data control threads have been joined
[2026-03-21 13:11:54] 2026-03-21 17:10:53,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:53,490 | INFO     | [job] job monitor thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:53,672 | INFO     | [data] copytool_in thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:53,673 | INFO     | [payload] validate_post thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,083 | INFO     | [payload] failed_post thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,102 | INFO     | [job] validate thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,200 | INFO     | [job] control thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,333 | INFO     | [payload] control thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,402 | INFO     | [data] control thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,455 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,676 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:54,824 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:55,176 | INFO     | [data] copytool_out thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:10:56,350 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 13:11:54] 2026-03-21 17:11:22,929 | INFO     | PID=2585034 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-21 13:11:54] 2026-03-21 17:11:22,929 | INFO     | .. there are 3 such processes running
[2026-03-21 13:11:54] 2026-03-21 17:11:22,929 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 13:11:54] 2026-03-21 17:11:22,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 13:11:54] 2026-03-21 17:11:22,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 13:11:54] 2026-03-21 17:11:47,898 | INFO     | [monitor] cgroup control has ended
[2026-03-21 13:11:54] 2026-03-21 17:11:49,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126278239831872)>', '<ExcThread(monitor, started 126277957990144)>']
[2026-03-21 13:11:54] 2026-03-21 17:11:50,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 13:11:54] 2026-03-21 17:11:50,055 | INFO     | [monitor] control thread has ended
[2026-03-21 13:11:54] 2026-03-21 17:11:54,576 | INFO     | all workflow threads have been joined
[2026-03-21 13:11:54] 2026-03-21 17:11:54,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 13:11:54] 2026-03-21 17:11:54,576 | INFO     | traces error code: 0
[2026-03-21 13:11:54] 2026-03-21 17:11:54,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 13:11:54] 2026-03-21 17:11:54,643 [wrapper] ==== pilot stdout END ====
[2026-03-21 13:11:54] 2026-03-21 17:11:54,645 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 13:11:54] 2026-03-21 17:11:54,647 [wrapper] pilotpid: 2585034
[2026-03-21 13:11:54] 2026-03-21 17:11:54,649 [wrapper] Pilot exit status: 0
[2026-03-21 13:11:54] 2026-03-21 17:11:54,656 [wrapper] pandaids: 7053192075
[2026-03-21 13:11:54] 2026-03-21 17:11:54,697 [wrapper] cleanup supervisor_pilot 2642124 2585035
[2026-03-21 13:11:54] 2026-03-21 17:11:54,699 [wrapper] Test setup, not cleaning
[2026-03-21 13:11:54] 2026-03-21 17:11:54,701 [wrapper] apfmon messages muted
[2026-03-21 13:11:54] 2026-03-21 17:11:54,703 [wrapper] ==== wrapper stdout END ====
[2026-03-21 13:11:54] 2026-03-21 17:11:54,705 [wrapper] ==== wrapper stderr END ====
[2026-03-21 13:11:54]  *** Error codes and diagnostics ***
[2026-03-21 13:11:54]     "exeErrorCode": 0,
[2026-03-21 13:11:54]     "exeErrorDiag": "",
[2026-03-21 13:11:54]     "pilotErrorCode": 0,
[2026-03-21 13:11:54]     "pilotErrorDiag": "",
[2026-03-21 13:11:54]  *** Listing of results directory ***
[2026-03-21 13:11:54] total 406064
[2026-03-21 13:11:54] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 13 03:23 pilot3.tar.gz
[2026-03-21 13:11:54] -rwx------ 1 whitlerd whitlerd     36322 Mar 13 03:24 runpilot2-wrapper.sh
[2026-03-21 13:11:54] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 13 03:24 queuedata.json
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 21 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 13:11:54] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 21 09:15 run_atlas
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 21 09:15 job.xml
[2026-03-21 13:11:54] -rw-r--r-- 2 whitlerd whitlerd 210955710 Mar 21 09:15 EVNT.48967083._000751.pool.root.1
[2026-03-21 13:11:54] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 21 09:15 start_atlas.sh
[2026-03-21 13:11:54] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 21 09:15 shared
[2026-03-21 13:11:54] -rw-r--r-- 2 whitlerd whitlerd    597521 Mar 21 09:15 input.tar.gz
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd      8883 Mar 21 09:15 init_data.xml
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 21 09:15 boinc_setup_complete
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 21 09:15 boinc_lockfile
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar 21 09:15 pandaJob.out
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd   1010663 Mar 21 09:15 agis_schedconf.cvmfs.json
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd       426 Mar 21 09:15 workernode_map.json
[2026-03-21 13:11:54] drwx------ 5 whitlerd whitlerd      4096 Mar 21 09:15 pilot3
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 21 13:10 boinc_task_state.xml
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd 196083871 Mar 21 13:10 HITS.48967085._018751.pool.root.1
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd        95 Mar 21 13:10 pilot_heartbeat.json
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd      1034 Mar 21 13:10 memory_monitor_summary.json
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd   1511579 Mar 21 13:10 agis_ddmendpoints.agis.ALL.json
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd    391655 Mar 21 13:10 log.48967085._018751.job.log.tgz.1
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd      6330 Mar 21 13:10 heartbeat.json
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 21 13:11 boinc_mmap_file
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 21 13:11 wrapper_checkpoint.txt
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd      5019 Mar 21 13:11 pilotlog.txt
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd   2020941 Mar 21 13:11 log.48967085._018751.job.log.1
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd       357 Mar 21 13:11 output.list
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 21 13:11 runtime_log
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd   2426880 Mar 21 13:11 result.tar.gz
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd       645 Mar 21 13:11 tJkMDmZ3BL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkxoLDmUnhLQm.diag
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd      8985 Mar 21 13:11 runtime_log.err
[2026-03-21 13:11:54] -rw-rw-r-- 1 whitlerd whitlerd     21358 Mar 21 13:11 stderr.txt
[2026-03-21 13:11:54] HITS file was successfully produced:
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd 196083871 Mar 21 13:10 shared/HITS.pool.root.1
[2026-03-21 13:11:54]  *** Contents of shared directory: ***
[2026-03-21 13:11:54] total 400484
[2026-03-21 13:11:54] -rw-r--r-- 2 whitlerd whitlerd 210955710 Mar 21 09:15 ATLAS.root_0
[2026-03-21 13:11:54] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 21 09:15 start_atlas.sh
[2026-03-21 13:11:54] -rw-r--r-- 2 whitlerd whitlerd    597521 Mar 21 09:15 input.tar.gz
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd 196083871 Mar 21 13:10 HITS.pool.root.1
[2026-03-21 13:11:54] -rw------- 1 whitlerd whitlerd   2426880 Mar 21 13:11 result.tar.gz
13:11:56 (2580858): run_atlas exited; CPU time 54997.933912
13:11:56 (2580858): called boinc_finish(0)

</stderr_txt>
]]>

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