Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:27:52 (3264283): wrapper (7.7.26015): starting
08:27:52 (3264283): wrapper: running run_atlas (--nthreads 11)
[2026-03-21 08:27:52] Arguments: --nthreads 11
[2026-03-21 08:27:52] Threads: 11
[2026-03-21 08:27:52] Checking for CVMFS
[2026-03-21 08:27:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-21 08:27:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-21 08:27:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-21 08:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-21 08:27:54] 2.13.3.0 4156 98740 851392 157539 2 290 30047626 32935911 60492 16776704 0 775788524 99.753 492726527 28289 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-21 08:27:54] CVMFS is ok
[2026-03-21 08:27:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-21 08:27:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-21 08:27:54] Further information can be found at the LHC@home message board.
[2026-03-21 08:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-21 08:27:54] Checking for apptainer binary...
[2026-03-21 08:27:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-21 08:27:54] Running /usr/bin/apptainer --version
[2026-03-21 08:27:54] apptainer version 1.4.5-2.el9
[2026-03-21 08:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-21 08:27:55] lc-10-10.aglt2.org
[2026-03-21 08:27:55] apptainer works
[2026-03-21 08:27:55] Set ATHENA_PROC_NUMBER=11
[2026-03-21 08:27:55] Set ATHENA_CORE_NUMBER=11
[2026-03-21 08:27:55] Starting ATLAS job with PandaID=7054483189
[2026-03-21 08:27:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:10:18 (4181349): wrapper (7.7.26015): starting
13:10:18 (4181349): wrapper: running run_atlas (--nthreads 8)
[2026-03-21 13:10:18] Arguments: --nthreads 8
[2026-03-21 13:10:18] Threads: 8
[2026-03-21 13:10:18] This job has been restarted, cleaning up previous attempt
[2026-03-21 13:10:18] Checking for CVMFS
[2026-03-21 13:10:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-21 13:10:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-21 13:10:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-21 13:10:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-21 13:10:21] 2.13.3.0 4156 99022 846652 157546 0 64 20178409 32935936 56097 16776704 0 777078026 99.753 493892324 28292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-21 13:10:21] CVMFS is ok
[2026-03-21 13:10:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-21 13:10:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-21 13:10:21] Further information can be found at the LHC@home message board.
[2026-03-21 13:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-21 13:10:21] Checking for apptainer binary...
[2026-03-21 13:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-21 13:10:21] Running /usr/bin/apptainer --version
[2026-03-21 13:10:21] apptainer version 1.4.5-2.el9
[2026-03-21 13:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-21 13:10:21] lc-10-10.aglt2.org
[2026-03-21 13:10:21] apptainer works
[2026-03-21 13:10:21] Set ATHENA_PROC_NUMBER=8
[2026-03-21 13:10:21] Set ATHENA_CORE_NUMBER=8
[2026-03-21 13:10:22] Starting ATLAS job with PandaID=7054483189
[2026-03-21 13:10:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 17:45:58]  *** The last 200 lines of the pilot log: ***
[2026-03-21 17:45:58] 2026-03-21 21:44:47,050 | INFO     | job 7054483189 has state=finished
[2026-03-21 17:45:58] 2026-03-21 21:44:47,050 | INFO     | preparing for final server update for job 7054483189 in state='finished'
[2026-03-21 17:45:58] 2026-03-21 21:44:47,199 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,200 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7054483189/jobReport.json
[2026-03-21 17:45:58] 2026-03-21 21:44:47,206 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-21 17:45:58] 2026-03-21 21:44:47,207 | INFO     | this job has now completed (state=finished)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,207 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,207 | INFO     | log transfer has been attempted: DONE
[2026-03-21 17:45:58] 2026-03-21 21:44:47,207 | INFO     | job 7054483189 has finished - writing final server update
[2026-03-21 17:45:58] 2026-03-21 21:44:47,208 | INFO     | total number of processed events: 400 (read)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,245 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7054483189/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,246 | INFO     | extracted standard info from prmon json
[2026-03-21 17:45:58] 2026-03-21 21:44:47,246 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 17:45:58] 2026-03-21 21:44:47,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 17:45:58] 2026-03-21 21:44:47,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-21 17:45:58] 2026-03-21 21:44:47,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-21 17:45:58] 2026-03-21 21:44:47,311 | INFO     | fitting pss+swap vs Time
[2026-03-21 17:45:58] 2026-03-21 21:44:47,331 | INFO     | sum of square deviations: 5968568351.712696
[2026-03-21 17:45:58] 2026-03-21 21:44:47,333 | INFO     | sum of deviations: -2949155227.8694286
[2026-03-21 17:45:58] 2026-03-21 21:44:47,333 | INFO     | mean x: 1774121310.7052238
[2026-03-21 17:45:58] 2026-03-21 21:44:47,333 | INFO     | mean y: 2550105.406716418
[2026-03-21 17:45:58] 2026-03-21 21:44:47,333 | INFO     | intersect: 879168890.6870245
[2026-03-21 17:45:58] 2026-03-21 21:44:47,334 | INFO     | chi2: 3.3534871781944404
[2026-03-21 17:45:58] 2026-03-21 21:44:47,334 | INFO     | sum of square deviations: 5640709211.498126
[2026-03-21 17:45:58] 2026-03-21 21:44:47,340 | INFO     | sum of deviations: 14471838309.07985
[2026-03-21 17:45:58] 2026-03-21 21:44:47,340 | INFO     | mean x: 1774121158.2091255
[2026-03-21 17:45:58] 2026-03-21 21:44:47,340 | INFO     | mean y: 2558089.216730038
[2026-03-21 17:45:58] 2026-03-21 21:44:47,340 | INFO     | intersect: -4549138085.793312
[2026-03-21 17:45:58] 2026-03-21 21:44:47,341 | INFO     | chi2: 2.6891305511545274
[2026-03-21 17:45:58] 2026-03-21 21:44:47,341 | INFO     | current chi2=2.6891305511545274 (change=19.810918955044613 %)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,341 | INFO     | right removable region: 262
[2026-03-21 17:45:58] 2026-03-21 21:44:47,341 | INFO     | sum of square deviations: 5640675661.498126
[2026-03-21 17:45:58] 2026-03-21 21:44:47,347 | INFO     | sum of deviations: -68198630959.69202
[2026-03-21 17:45:58] 2026-03-21 21:44:47,347 | INFO     | mean x: 1774121463.2091255
[2026-03-21 17:45:58] 2026-03-21 21:44:47,348 | INFO     | mean y: 2580327.121673004
[2026-03-21 17:45:58] 2026-03-21 21:44:47,348 | INFO     | intersect: 21452609048.491753
[2026-03-21 17:45:58] 2026-03-21 21:44:47,348 | INFO     | chi2: 0.9410302694719683
[2026-03-21 17:45:58] 2026-03-21 21:44:47,348 | INFO     | current chi2=0.9410302694719683 (change=71.93875451229157 %)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,349 | INFO     | sum of square deviations: 5325015758.775222
[2026-03-21 17:45:58] 2026-03-21 21:44:47,354 | INFO     | sum of deviations: -79469358706.83722
[2026-03-21 17:45:58] 2026-03-21 21:44:47,355 | INFO     | mean x: 1774121615.7131784
[2026-03-21 17:45:58] 2026-03-21 21:44:47,355 | INFO     | mean y: 2585749.069767442
[2026-03-21 17:45:58] 2026-03-21 21:44:47,355 | INFO     | intersect: 26479184778.157364
[2026-03-21 17:45:58] 2026-03-21 21:44:47,355 | INFO     | chi2: 0.8306617999141189
[2026-03-21 17:45:58] 2026-03-21 21:44:47,355 | INFO     | current chi2=0.8306617999141189 (change=11.728471775916352 %)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,355 | INFO     | left removable region: 20
[2026-03-21 17:45:58] 2026-03-21 21:44:47,356 | INFO     | sum of square deviations: 4394471492.892593
[2026-03-21 17:45:58] 2026-03-21 21:44:47,357 | INFO     | sum of deviations: -51624381951.57853
[2026-03-21 17:45:58] 2026-03-21 21:44:47,357 | INFO     | mean x: 1774121737.7190082
[2026-03-21 17:45:58] 2026-03-21 21:44:47,357 | INFO     | mean y: 2589874.756198347
[2026-03-21 17:45:58] 2026-03-21 21:44:47,357 | INFO     | intersect: 20844217443.56265
[2026-03-21 17:45:58] 2026-03-21 21:44:47,362 | INFO     | chi2: 0.1374111648573325
[2026-03-21 17:45:58] 2026-03-21 21:44:47,362 | INFO     | current memory leak: -11.75 B/s (using 242 data points, chi2=0.14)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | could have reported an average CPU frequency of 2720 MHz (13 samples)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | ..............................
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | . Timing measurements:
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | . get job = 0 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | . initial setup = 4 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | . payload setup = 44 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | . stage-in = 0 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | . payload execution = 16333 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,363 | INFO     | . stage-out = 7 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,364 | INFO     | . log creation = 0 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,364 | INFO     | ..............................
[2026-03-21 17:45:58] 2026-03-21 21:44:47,418 | INFO     | time since job start (16407s) is within the limit (345600.0s)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,846 | INFO     | 
[2026-03-21 17:45:58] 2026-03-21 21:44:47,846 | INFO     | job summary report
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | --------------------------------------------------
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | PanDA job id: 7054483189
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | task id: 48967085
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | errors: (none)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | pilot state: finished 
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | transexitcode: 0
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | exeerrorcode: 0
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | exeerrordiag: 
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | exitcode: 0
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | exitmsg: OK
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | cpuconsumptiontime: 48650 s
[2026-03-21 17:45:58] 2026-03-21 21:44:47,847 | INFO     | nevents: 400
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | neventsw: 0
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | pid: 16426
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | pgrp: 16426
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | corecount: 8
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | event service: False
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | sizes: {0: 2279754, 1: 2279838, 2: 2280299, 13: 2280299, 16382: 2312142, 16390: 2321140, 16391: 2321324, 16394: 2321518}
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | --------------------------------------------------
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | 
[2026-03-21 17:45:58] 2026-03-21 21:44:47,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-21 17:45:58] 2026-03-21 21:44:47,947 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,947 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,947 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,947 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,948 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,949 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 17:45:58] 2026-03-21 21:44:47,949 | INFO     | job 7054483189 has completed (purged errors)
[2026-03-21 17:45:58] 2026-03-21 21:44:47,949 | INFO     | overall cleanup function is called
[2026-03-21 17:45:58] 2026-03-21 21:44:48,982 | INFO     | --- collectZombieJob: --- 10, [16426]
[2026-03-21 17:45:58] 2026-03-21 21:44:48,982 | INFO     | zombie collector waiting for pid 16426
[2026-03-21 17:45:58] 2026-03-21 21:44:48,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 17:45:58] 2026-03-21 21:44:48,982 | INFO     | collected zombie processes
[2026-03-21 17:45:58] 2026-03-21 21:44:48,982 | INFO     | will attempt to kill all subprocesses of pid=16426
[2026-03-21 17:45:58] 2026-03-21 21:44:51,087 | INFO     | process IDs to be killed: [16426] (in reverse order)
[2026-03-21 17:45:58] 2026-03-21 21:44:51,602 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 17:45:58] 2026-03-21 21:44:51,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 17:45:58] 2026-03-21 21:44:51,633 | INFO     | did not find any defunct processes belonging to 16426
[2026-03-21 17:45:58] 2026-03-21 21:44:51,727 | INFO     | did not find any defunct processes belonging to 16426
[2026-03-21 17:45:58] 2026-03-21 21:44:51,727 | INFO     | ready for new job
[2026-03-21 17:45:58] 2026-03-21 21:44:51,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 17:45:58] 2026-03-21 21:44:51,729 | INFO     | **************************************
[2026-03-21 17:45:58] 2026-03-21 21:44:51,729 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 17:45:58] 2026-03-21 21:44:51,729 | INFO     | **************************************
[2026-03-21 17:45:58] 2026-03-21 21:44:51,730 | INFO     | 
[2026-03-21 17:45:58] 2026-03-21 21:44:51,739 | INFO     | architecture information:
[2026-03-21 17:45:58] 2026-03-21 21:44:51,743 | INFO     | executing command: cat /etc/os-release
[2026-03-21 17:45:58] 2026-03-21 21:44:51,829 | INFO     | cat /etc/os-release:
[2026-03-21 17:45:58] NAME="CentOS Linux"
[2026-03-21 17:45:58] VERSION="7 (Core)"
[2026-03-21 17:45:58] ID="centos"
[2026-03-21 17:45:58] ID_LIKE="rhel fedora"
[2026-03-21 17:45:58] VERSION_ID="7"
[2026-03-21 17:45:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 17:45:58] ANSI_COLOR="0;31"
[2026-03-21 17:45:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 17:45:58] HOME_URL="https://www.centos.org/"
[2026-03-21 17:45:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 17:45:58] 
[2026-03-21 17:45:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 17:45:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 17:45:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 17:45:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 17:45:58] 
[2026-03-21 17:45:58] 2026-03-21 21:44:51,829 | INFO     | **************************************
[2026-03-21 17:45:58] 2026-03-21 21:44:52,333 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-21 17:45:58] 2026-03-21 21:44:52,417 | INFO     | sufficient remaining disk space (94177853440 B)
[2026-03-21 17:45:58] 2026-03-21 21:44:52,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 17:45:58] 2026-03-21 21:44:52,417 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 17:45:58] 2026-03-21 21:44:52,417 | INFO     | update_server=False
[2026-03-21 17:45:58] 2026-03-21 21:44:52,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 17:45:58] 2026-03-21 21:44:52,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 17:45:58] 2026-03-21 21:44:52,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 17:45:58] 2026-03-21 21:44:52,418 | INFO     | aborting loop
[2026-03-21 17:45:58] 2026-03-21 21:44:52,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 17:45:58] 2026-03-21 21:44:53,390 | INFO     | all data control threads have been joined
[2026-03-21 17:45:58] 2026-03-21 21:44:53,423 | INFO     | [job] retrieve thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,427 | INFO     | [job] job monitor thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,445 | INFO     | all payload control threads have been joined
[2026-03-21 17:45:58] 2026-03-21 21:44:53,552 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,552 | INFO     | [data] copytool_in thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,570 | INFO     | all job control threads have been joined
[2026-03-21 17:45:58] 2026-03-21 21:44:53,611 | INFO     | [payload] failed_post thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,611 | INFO     | [payload] validate_post thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,651 | INFO     | [job] validate thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,676 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:53,891 | INFO     | [job] queue monitor thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:54,317 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:54,396 | INFO     | [data] control thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:54,425 | INFO     | [data] copytool_out thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:54,451 | INFO     | [payload] control thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:54,553 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:54,576 | INFO     | [job] control thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:44:54,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 17:45:58] 2026-03-21 21:44:58,745 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 17:45:58] 2026-03-21 21:45:25,111 | INFO     | PID=4247 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-21 17:45:58] 2026-03-21 21:45:25,111 | INFO     | .. there are 90 such processes running
[2026-03-21 17:45:58] 2026-03-21 21:45:25,111 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 17:45:58] 2026-03-21 21:45:25,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 17:45:58] 2026-03-21 21:45:25,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 17:45:58] 2026-03-21 21:45:49,980 | INFO     | [monitor] cgroup control has ended
[2026-03-21 17:45:58] 2026-03-21 21:45:51,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679630468928)>', '<ExcThread(monitor, started 140679288182528)>']
[2026-03-21 17:45:58] 2026-03-21 21:45:52,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 17:45:58] 2026-03-21 21:45:52,324 | INFO     | [monitor] control thread has ended
[2026-03-21 17:45:58] 2026-03-21 21:45:56,433 | INFO     | all workflow threads have been joined
[2026-03-21 17:45:58] 2026-03-21 21:45:56,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 17:45:58] 2026-03-21 21:45:56,433 | INFO     | traces error code: 0
[2026-03-21 17:45:58] 2026-03-21 21:45:56,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 17:45:58] 2026-03-21 21:45:56,878 [wrapper] ==== pilot stdout END ====
[2026-03-21 17:45:58] 2026-03-21 21:45:56,935 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 17:45:58] 2026-03-21 21:45:56,960 [wrapper] pilotpid: 4247
[2026-03-21 17:45:58] 2026-03-21 21:45:56,984 [wrapper] Pilot exit status: 0
[2026-03-21 17:45:58] 2026-03-21 21:45:57,138 [wrapper] pandaids: 7054483189 7054483189
[2026-03-21 17:45:58] 2026-03-21 21:45:57,864 [wrapper] cleanup supervisor_pilot 1393293 4248
[2026-03-21 17:45:58] 2026-03-21 21:45:57,889 [wrapper] Test setup, not cleaning
[2026-03-21 17:45:58] 2026-03-21 21:45:57,900 [wrapper] apfmon messages muted
[2026-03-21 17:45:58] 2026-03-21 21:45:57,912 [wrapper] ==== wrapper stdout END ====
[2026-03-21 17:45:58] 2026-03-21 21:45:57,922 [wrapper] ==== wrapper stderr END ====
[2026-03-21 17:45:58]  *** Error codes and diagnostics ***
[2026-03-21 17:45:58]     "exeErrorCode": 0,
[2026-03-21 17:45:58]     "exeErrorDiag": "",
[2026-03-21 17:45:58]     "pilotErrorCode": 0,
[2026-03-21 17:45:58]     "pilotErrorDiag": "",
[2026-03-21 17:45:58]  *** Listing of results directory ***
[2026-03-21 17:45:58] total 625352
[2026-03-21 17:45:58] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas    585013 Mar 14 04:39 pilot3.tar.gz
[2026-03-21 17:45:58] -rwx------. 1 boincer umatlas     36322 Mar 14 04:39 runpilot2-wrapper.sh
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas      5111 Mar 14 04:41 queuedata.json
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas       100 Mar 21 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 17:45:58] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 21 08:27 run_atlas
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas       105 Mar 21 08:27 job.xml
[2026-03-21 17:45:58] -rw-r--r--. 3 boincer umatlas 215342500 Mar 21 08:27 EVNT.48967083._000925.pool.root.1
[2026-03-21 17:45:58] -rw-r--r--. 3 boincer umatlas 215342500 Mar 21 08:27 ATLAS.root_0
[2026-03-21 17:45:58] -rw-r--r--. 2 boincer umatlas     15845 Mar 21 08:27 start_atlas.sh
[2026-03-21 17:45:58] drwxrwx--x. 2 boincer umatlas      4096 Mar 21 08:27 shared
[2026-03-21 17:45:58] -rw-r--r--. 2 boincer umatlas    597522 Mar 21 08:27 input.tar.gz
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas         0 Mar 21 08:27 boinc_lockfile
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas      2564 Mar 21 13:10 pandaJob.out
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas        57 Mar 21 13:10 setup.sh.local
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas   1010663 Mar 21 13:11 agis_schedconf.cvmfs.json
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas       441 Mar 21 13:11 workernode_map.json
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas 201053057 Mar 21 17:43 HITS.48967085._022933.pool.root.1
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas       531 Mar 21 17:43 boinc_task_state.xml
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas      1044 Mar 21 17:44 memory_monitor_summary.json
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas        96 Mar 21 17:44 pilot_heartbeat.json
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas   1511579 Mar 21 17:44 agis_ddmendpoints.agis.ALL.json
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas    476984 Mar 21 17:44 log.48967085._022933.job.log.tgz.1
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas      6399 Mar 21 17:44 heartbeat.json
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas      6867 Mar 21 17:45 init_data.xml
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas      8192 Mar 21 17:45 boinc_mmap_file
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas        28 Mar 21 17:45 wrapper_checkpoint.txt
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas      4817 Mar 21 17:45 pilotlog.txt
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas   1857630 Mar 21 17:45 log.48967085._022933.job.log.1
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas       357 Mar 21 17:45 output.list
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas       620 Mar 21 17:45 runtime_log
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas   2355200 Mar 21 17:45 result.tar.gz
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas      9427 Mar 21 17:45 runtime_log.err
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas       782 Mar 21 17:45 jLCNDmwhZL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5KsLDmUHtpTm.diag
[2026-03-21 17:45:58] -rw-r--r--. 1 boincer umatlas     23493 Mar 21 17:45 stderr.txt
[2026-03-21 17:45:58] HITS file was successfully produced:
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas 201053057 Mar 21 17:43 shared/HITS.pool.root.1
[2026-03-21 17:45:58]  *** Contents of shared directory: ***
[2026-03-21 17:45:58] total 409548
[2026-03-21 17:45:58] -rw-r--r--. 3 boincer umatlas 215342500 Mar 21 08:27 ATLAS.root_0
[2026-03-21 17:45:58] -rw-r--r--. 2 boincer umatlas     15845 Mar 21 08:27 start_atlas.sh
[2026-03-21 17:45:58] -rw-r--r--. 2 boincer umatlas    597522 Mar 21 08:27 input.tar.gz
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas 201053057 Mar 21 17:43 HITS.pool.root.1
[2026-03-21 17:45:58] -rw-------. 1 boincer umatlas   2355200 Mar 21 17:45 result.tar.gz
17:46:00 (4181349): run_atlas exited; CPU time 49743.739104
17:46:00 (4181349): called boinc_finish(0)

</stderr_txt>
]]>

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