Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
01:55:40 (1577406): wrapper (7.7.26015): starting
01:55:40 (1577406): wrapper: running run_atlas (--nthreads 4)
[2026-03-21 01:55:40] Arguments: --nthreads 4
[2026-03-21 01:55:40] Threads: 4
[2026-03-21 01:55:40] Checking for CVMFS
[2026-03-21 01:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-21 01:55:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-21 01:55:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-21 01:55:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-21 01:55:41] 2.13.3.0 1278651 958 49280 157528 3 50 4072689 4096000 1832 130560 0 563550 99.985 35766 960 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-21 01:55:41] CVMFS is ok
[2026-03-21 01:55:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-21 01:55:41] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-21 01:55:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-21 01:55:41] Further information can be found at the LHC@home message board.
[2026-03-21 01:55:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-21 01:55:41] Checking for apptainer binary...
[2026-03-21 01:55:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-21 01:55:41] Running /usr/bin/apptainer --version
[2026-03-21 01:55:41] apptainer version 1.4.5
[2026-03-21 01:55:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-21 01:55:41] OptiPlex7070-Ubuntu
[2026-03-21 01:55:41] apptainer works
[2026-03-21 01:55:41] Set ATHENA_PROC_NUMBER=4
[2026-03-21 01:55:41] Set ATHENA_CORE_NUMBER=4
[2026-03-21 01:55:41] Starting ATLAS job with PandaID=7043636494
[2026-03-21 01:55:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 03:35:12]  *** The last 200 lines of the pilot log: ***
[2026-03-21 03:35:12]  replicas=None
[2026-03-21 03:35:12]  scope=mc23_13p6TeV
[2026-03-21 03:35:12]  status=None
[2026-03-21 03:35:12]  status_code=0
[2026-03-21 03:35:12]  storage_token=
[2026-03-21 03:35:12]  surl=/home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7043636494/log.48955006._049397.job.log.tgz.1
[2026-03-21 03:35:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/4c/log.48955006._049397.job.log.tgz.1
[2026-03-21 03:35:12]  workdir=None
[2026-03-21 03:35:12] ]
[2026-03-21 03:35:12] 2026-03-21 07:34:33,664 | INFO     | transferring file log.48955006._049397.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7043636494/log.48955006._049397.job.log.tgz.1 to /home/w
[2026-03-21 03:35:12] 2026-03-21 07:34:33,664 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7043636494/log.48955006._049397.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slot
[2026-03-21 03:35:12] 2026-03-21 07:34:33,680 | INFO     | adding to output.list: log.48955006._049397.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/4c/log.48955006._049397.job.log.tg
[2026-03-21 03:35:12] 2026-03-21 07:34:33,681 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-21 03:35:12] 2026-03-21 07:34:33,681 | INFO     | summary of transferred files:
[2026-03-21 03:35:12] 2026-03-21 07:34:33,681 | INFO     |  -- lfn=log.48955006._049397.job.log.tgz.1, status_code=0, status=transferred
[2026-03-21 03:35:12] 2026-03-21 07:34:33,682 | INFO     | stage-out finished correctly
[2026-03-21 03:35:12] 2026-03-21 07:34:33,723 | INFO     | time since job start (5917s) is within the limit (345600.0s)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,694 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-21 03:35:12] 2026-03-21 07:34:34,763 | INFO     | job 7043636494 has state=finished
[2026-03-21 03:35:12] 2026-03-21 07:34:34,764 | INFO     | preparing for final server update for job 7043636494 in state='finished'
[2026-03-21 03:35:12] 2026-03-21 07:34:34,764 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7043636494/jobReport.json
[2026-03-21 03:35:12] 2026-03-21 07:34:34,766 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/3/workernode_map.json
[2026-03-21 03:35:12] 2026-03-21 07:34:34,766 | INFO     | this job has now completed (state=finished)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,766 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,766 | INFO     | log transfer has been attempted: DONE
[2026-03-21 03:35:12] 2026-03-21 07:34:34,766 | INFO     | job 7043636494 has finished - writing final server update
[2026-03-21 03:35:12] 2026-03-21 07:34:34,766 | INFO     | total number of processed events: 400 (read)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,769 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7043636494/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,769 | INFO     | extracted standard info from prmon json
[2026-03-21 03:35:12] 2026-03-21 07:34:34,769 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 03:35:12] 2026-03-21 07:34:34,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 03:35:12] 2026-03-21 07:34:34,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-21 03:35:12] 2026-03-21 07:34:34,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-21 03:35:12] 2026-03-21 07:34:34,771 | INFO     | fitting pss+swap vs Time
[2026-03-21 03:35:12] 2026-03-21 07:34:34,772 | INFO     | sum of square deviations: 226022842.5
[2026-03-21 03:35:12] 2026-03-21 07:34:34,772 | INFO     | sum of deviations: -13068586228.5
[2026-03-21 03:35:12] 2026-03-21 07:34:34,772 | INFO     | mean x: 1774075595.5
[2026-03-21 03:35:12] 2026-03-21 07:34:34,772 | INFO     | mean y: 2402159.211111111
[2026-03-21 03:35:12] 2026-03-21 07:34:34,772 | INFO     | intersect: 102579025120.09276
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | chi2: 0.1778044144196387
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | current memory leak: -57.82 B/s (using 90 data points, chi2=0.18)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | could have reported an average CPU frequency of 3404 MHz (7 samples)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | ..............................
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | . Timing measurements:
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | . get job = 0 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | . initial setup = 5 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,773 | INFO     | . payload setup = 5 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,774 | INFO     | . stage-in = 0 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,774 | INFO     | . payload execution = 5896 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,774 | INFO     | . stage-out = 0 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,774 | INFO     | . log creation = 0 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,774 | INFO     | ..............................
[2026-03-21 03:35:12] 2026-03-21 07:34:34,845 | INFO     | 
[2026-03-21 03:35:12] 2026-03-21 07:34:34,845 | INFO     | job summary report
[2026-03-21 03:35:12] 2026-03-21 07:34:34,845 | INFO     | --------------------------------------------------
[2026-03-21 03:35:12] 2026-03-21 07:34:34,845 | INFO     | PanDA job id: 7043636494
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | task id: 48955006
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | errors: (none)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | pilot state: finished 
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | transexitcode: 0
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | exeerrorcode: 0
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | exeerrordiag: 
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | exitcode: 0
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | exitmsg: OK
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | cpuconsumptiontime: 22852 s
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | nevents: 400
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | neventsw: 0
[2026-03-21 03:35:12] 2026-03-21 07:34:34,846 | INFO     | pid: 1586106
[2026-03-21 03:35:12] 2026-03-21 07:34:34,847 | INFO     | pgrp: 1586106
[2026-03-21 03:35:12] 2026-03-21 07:34:34,847 | INFO     | corecount: 4
[2026-03-21 03:35:12] 2026-03-21 07:34:34,847 | INFO     | event service: False
[2026-03-21 03:35:12] 2026-03-21 07:34:34,847 | INFO     | sizes: {0: 2280244, 11: 2280244, 5905: 2307122, 5906: 2316148, 5907: 2316398}
[2026-03-21 03:35:12] 2026-03-21 07:34:34,847 | INFO     | --------------------------------------------------
[2026-03-21 03:35:12] 2026-03-21 07:34:34,847 | INFO     | 
[2026-03-21 03:35:12] 2026-03-21 07:34:34,847 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-21 03:35:12] 2026-03-21 07:34:34,859 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | job 7043636494 has completed (purged errors)
[2026-03-21 03:35:12] 2026-03-21 07:34:34,861 | INFO     | overall cleanup function is called
[2026-03-21 03:35:12] 2026-03-21 07:34:35,868 | INFO     | --- collectZombieJob: --- 10, [1586106]
[2026-03-21 03:35:12] 2026-03-21 07:34:35,868 | INFO     | zombie collector waiting for pid 1586106
[2026-03-21 03:35:12] 2026-03-21 07:34:35,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 03:35:12] 2026-03-21 07:34:35,868 | INFO     | collected zombie processes
[2026-03-21 03:35:12] 2026-03-21 07:34:35,868 | INFO     | will attempt to kill all subprocesses of pid=1586106
[2026-03-21 03:35:12] 2026-03-21 07:34:36,011 | INFO     | process IDs to be killed: [1586106] (in reverse order)
[2026-03-21 03:35:12] 2026-03-21 07:34:36,049 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 03:35:12] 2026-03-21 07:34:36,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 03:35:12] 2026-03-21 07:34:36,052 | INFO     | did not find any defunct processes belonging to 1586106
[2026-03-21 03:35:12] 2026-03-21 07:34:36,055 | INFO     | did not find any defunct processes belonging to 1586106
[2026-03-21 03:35:12] 2026-03-21 07:34:36,055 | INFO     | ready for new job
[2026-03-21 03:35:12] 2026-03-21 07:34:36,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 03:35:12] 2026-03-21 07:34:36,057 | INFO     | **************************************
[2026-03-21 03:35:12] 2026-03-21 07:34:36,057 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 03:35:12] 2026-03-21 07:34:36,057 | INFO     | **************************************
[2026-03-21 03:35:12] 2026-03-21 07:34:36,057 | INFO     | 
[2026-03-21 03:35:12] 2026-03-21 07:34:36,058 | INFO     | architecture information:
[2026-03-21 03:35:12] 2026-03-21 07:34:36,058 | INFO     | executing command: cat /etc/os-release
[2026-03-21 03:35:12] 2026-03-21 07:34:36,069 | INFO     | cat /etc/os-release:
[2026-03-21 03:35:12] NAME="CentOS Linux"
[2026-03-21 03:35:12] VERSION="7 (Core)"
[2026-03-21 03:35:12] ID="centos"
[2026-03-21 03:35:12] ID_LIKE="rhel fedora"
[2026-03-21 03:35:12] VERSION_ID="7"
[2026-03-21 03:35:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 03:35:12] ANSI_COLOR="0;31"
[2026-03-21 03:35:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 03:35:12] HOME_URL="https://www.centos.org/"
[2026-03-21 03:35:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 03:35:12] 
[2026-03-21 03:35:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 03:35:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 03:35:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 03:35:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 03:35:12] 
[2026-03-21 03:35:12] 2026-03-21 07:34:36,069 | INFO     | **************************************
[2026-03-21 03:35:12] 2026-03-21 07:34:36,572 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-21 03:35:12] 2026-03-21 07:34:36,584 | INFO     | sufficient remaining disk space (410537426944 B)
[2026-03-21 03:35:12] 2026-03-21 07:34:36,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 03:35:12] 2026-03-21 07:34:36,584 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 03:35:12] 2026-03-21 07:34:36,584 | INFO     | update_server=False
[2026-03-21 03:35:12] 2026-03-21 07:34:36,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 03:35:12] 2026-03-21 07:34:36,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 03:35:12] 2026-03-21 07:34:36,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 03:35:12] 2026-03-21 07:34:36,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 03:35:12] 2026-03-21 07:34:37,242 | INFO     | all job control threads have been joined
[2026-03-21 03:35:12] 2026-03-21 07:34:37,478 | INFO     | all data control threads have been joined
[2026-03-21 03:35:12] 2026-03-21 07:34:37,590 | INFO     | [job] retrieve thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:37,590 | INFO     | [job] queue monitor thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:37,646 | WARNING  | process 1586106 can no longer be monitored (due to stat problems) - aborting
[2026-03-21 03:35:12] 2026-03-21 07:34:37,728 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 03:35:12] 2026-03-21 07:34:37,729 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 03:35:12] 2026-03-21 07:34:37,729 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-21 03:35:12] 2026-03-21 07:34:37,730 | WARNING  | maxPSS not found in memory monitor output
[2026-03-21 03:35:12] 2026-03-21 07:34:37,730 | INFO     | skipping file size check of payload stdout file (/home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7043636494/payload.stdout) since it has not been created yet
[2026-03-21 03:35:12] 2026-03-21 07:34:37,730 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-21 03:35:12] 2026-03-21 07:34:37,739 | INFO     | sufficient remaining disk space (410537426944 B)
[2026-03-21 03:35:12] 2026-03-21 07:34:37,740 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-21 03:35:12] 2026-03-21 07:34:37,740 | INFO     | output file size check: skipping output file /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7043636494/HITS.48955006._049397.pool.root.1 since it does not exist
[2026-03-21 03:35:12] 2026-03-21 07:34:37,843 | INFO     | all payload control threads have been joined
[2026-03-21 03:35:12] 2026-03-21 07:34:37,879 | INFO     | number of running child processes to parent process 1586106: 1
[2026-03-21 03:35:12] 2026-03-21 07:34:37,879 | INFO     | maximum number of monitored processes: 6
[2026-03-21 03:35:12] 2026-03-21 07:34:37,879 | INFO     | aborting job monitoring since job object (job id=7043636494) has expired
[2026-03-21 03:35:12] 2026-03-21 07:34:37,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 03:35:12] 2026-03-21 07:34:37,879 | INFO     | will abort loop
[2026-03-21 03:35:12] 2026-03-21 07:34:38,040 | INFO     | [job] validate thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,129 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,200 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,215 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,247 | INFO     | [job] control thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,327 | INFO     | [payload] failed_post thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,434 | INFO     | [data] copytool_in thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,483 | INFO     | [data] control thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,764 | INFO     | [data] copytool_out thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,848 | INFO     | [payload] control thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,885 | INFO     | [job] job monitor thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,928 | INFO     | [payload] validate_post thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:38,991 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:34:40,590 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 03:35:12] 2026-03-21 07:35:05,319 | INFO     | [monitor] cgroup control has ended
[2026-03-21 03:35:12] 2026-03-21 07:35:06,931 | INFO     | PID=1581598 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-21 03:35:12] 2026-03-21 07:35:06,931 | INFO     | .. there are 3 such processes running
[2026-03-21 03:35:12] 2026-03-21 07:35:06,932 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 03:35:12] 2026-03-21 07:35:06,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 03:35:12] 2026-03-21 07:35:06,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 03:35:12] 2026-03-21 07:35:07,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128894262458176)>', '<ExcThread(monitor, started 128893621094144)>']
[2026-03-21 03:35:12] 2026-03-21 07:35:07,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 03:35:12] 2026-03-21 07:35:07,937 | INFO     | [monitor] control thread has ended
[2026-03-21 03:35:12] 2026-03-21 07:35:12,452 | INFO     | all workflow threads have been joined
[2026-03-21 03:35:12] 2026-03-21 07:35:12,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 03:35:12] 2026-03-21 07:35:12,452 | INFO     | traces error code: 0
[2026-03-21 03:35:12] 2026-03-21 07:35:12,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 03:35:12] 2026-03-21 07:35:12,529 [wrapper] ==== pilot stdout END ====
[2026-03-21 03:35:12] 2026-03-21 07:35:12,531 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 03:35:12] 2026-03-21 07:35:12,533 [wrapper] pilotpid: 1581598
[2026-03-21 03:35:12] 2026-03-21 07:35:12,534 [wrapper] Pilot exit status: 0
[2026-03-21 03:35:12] 2026-03-21 07:35:12,543 [wrapper] pandaids: 7043636494
[2026-03-21 03:35:12] 2026-03-21 07:35:12,568 [wrapper] cleanup supervisor_pilot 1620403 1581599
[2026-03-21 03:35:12] 2026-03-21 07:35:12,569 [wrapper] Test setup, not cleaning
[2026-03-21 03:35:12] 2026-03-21 07:35:12,571 [wrapper] apfmon messages muted
[2026-03-21 03:35:12] 2026-03-21 07:35:12,574 [wrapper] ==== wrapper stdout END ====
[2026-03-21 03:35:12] 2026-03-21 07:35:12,576 [wrapper] ==== wrapper stderr END ====
[2026-03-21 03:35:12]  *** Error codes and diagnostics ***
[2026-03-21 03:35:12]     "exeErrorCode": 0,
[2026-03-21 03:35:12]     "exeErrorDiag": "",
[2026-03-21 03:35:12]     "pilotErrorCode": 0,
[2026-03-21 03:35:12]     "pilotErrorDiag": "",
[2026-03-21 03:35:12]  *** Listing of results directory ***
[2026-03-21 03:35:12] total 609584
[2026-03-21 03:35:12] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 12 19:01 pilot3.tar.gz
[2026-03-21 03:35:12] -rwx------ 1 whitlerd whitlerd     36322 Mar 12 19:02 runpilot2-wrapper.sh
[2026-03-21 03:35:12] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 12 19:03 queuedata.json
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 21 01:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 03:35:12] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 21 01:55 run_atlas
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 21 01:55 job.xml
[2026-03-21 03:35:12] -rw-r--r-- 2 whitlerd whitlerd 436936811 Mar 21 01:55 EVNT.46701403._000978.pool.root.1
[2026-03-21 03:35:12] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 21 01:55 start_atlas.sh
[2026-03-21 03:35:12] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 21 01:55 shared
[2026-03-21 03:35:12] -rw-r--r-- 2 whitlerd whitlerd    597530 Mar 21 01:55 input.tar.gz
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd      6447 Mar 21 01:55 init_data.xml
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 21 01:55 boinc_setup_complete
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 21 01:55 boinc_lockfile
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd      2564 Mar 21 01:55 pandaJob.out
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd   1010663 Mar 21 01:55 agis_schedconf.cvmfs.json
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd   1511579 Mar 21 01:55 agis_ddmendpoints.agis.ALL.json
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd       439 Mar 21 01:55 workernode_map.json
[2026-03-21 03:35:12] drwx------ 5 whitlerd whitlerd      4096 Mar 21 01:55 pilot3
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd 180992785 Mar 21 03:34 HITS.48955006._049397.pool.root.1
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 21 03:34 boinc_task_state.xml
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd      1030 Mar 21 03:34 memory_monitor_summary.json
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd    291649 Mar 21 03:34 log.48955006._049397.job.log.tgz.1
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd      6370 Mar 21 03:34 heartbeat.json
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd        95 Mar 21 03:35 pilot_heartbeat.json
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd      6390 Mar 21 03:35 pilotlog.txt
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd    882248 Mar 21 03:35 log.48955006._049397.job.log.1
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd       357 Mar 21 03:35 output.list
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 21 03:35 runtime_log
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd   1187840 Mar 21 03:35 result.tar.gz
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd      9054 Mar 21 03:35 runtime_log.err
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd       656 Mar 21 03:35 eHWMDm5D4K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyYlLDm719atm.diag
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 21 03:35 boinc_mmap_file
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd     22233 Mar 21 03:35 stderr.txt
[2026-03-21 03:35:12] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 21 03:35 wrapper_checkpoint.txt
[2026-03-21 03:35:12] HITS file was successfully produced:
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd 180992785 Mar 21 03:34 shared/HITS.pool.root.1
[2026-03-21 03:35:12]  *** Contents of shared directory: ***
[2026-03-21 03:35:12] total 605216
[2026-03-21 03:35:12] -rw-r--r-- 2 whitlerd whitlerd 436936811 Mar 21 01:55 ATLAS.root_0
[2026-03-21 03:35:12] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 21 01:55 start_atlas.sh
[2026-03-21 03:35:12] -rw-r--r-- 2 whitlerd whitlerd    597530 Mar 21 01:55 input.tar.gz
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd 180992785 Mar 21 03:34 HITS.pool.root.1
[2026-03-21 03:35:12] -rw------- 1 whitlerd whitlerd   1187840 Mar 21 03:35 result.tar.gz
03:35:14 (1577406): run_atlas exited; CPU time 22946.040194
03:35:14 (1577406): called boinc_finish(0)

</stderr_txt>
]]>

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