Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:20:41 (534281): wrapper (7.7.26015): starting
12:20:41 (534281): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 12:20:41] Arguments: --nthreads 12
[2026-03-20 12:20:41] Threads: 12
[2026-03-20 12:20:41] Checking for CVMFS
[2026-03-20 12:20:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 12:20:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 12:20:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 12:20:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 12:20:43] 2.13.3.0 8207 122109 295044 157507 0 13 28522586 40960001 7909 16776704 0 84814295 99.589 83671775 31106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-20 12:20:43] CVMFS is ok
[2026-03-20 12:20:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 12:20:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 12:20:43] Further information can be found at the LHC@home message board.
[2026-03-20 12:20:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 12:20:43] Checking for apptainer binary...
[2026-03-20 12:20:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 12:20:43] Running /usr/bin/apptainer --version
[2026-03-20 12:20:43] apptainer version 1.4.5-2.el9
[2026-03-20 12:20:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 12:20:44] c-211-11.aglt2.org
[2026-03-20 12:20:44] apptainer works
[2026-03-20 12:20:44] Set ATHENA_PROC_NUMBER=12
[2026-03-20 12:20:44] Set ATHENA_CORE_NUMBER=12
[2026-03-20 12:20:44] Starting ATLAS job with PandaID=7051653219
[2026-03-20 12:20:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 20:55:52]  *** The last 200 lines of the pilot log: ***
[2026-03-20 20:55:52] 2026-03-21 00:55:02,678 | INFO     | log transfer has been attempted: DONE
[2026-03-20 20:55:52] 2026-03-21 00:55:02,678 | INFO     | job 7051653219 has finished - writing final server update
[2026-03-20 20:55:52] 2026-03-21 00:55:02,678 | INFO     | total number of processed events: 400 (read)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,688 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7051653219/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,689 | INFO     | extracted standard info from prmon json
[2026-03-20 20:55:52] 2026-03-21 00:55:02,689 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 20:55:52] 2026-03-21 00:55:02,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 20:55:52] 2026-03-21 00:55:02,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 20:55:52] 2026-03-21 00:55:02,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 20:55:52] 2026-03-21 00:55:02,699 | INFO     | fitting pss+swap vs Time
[2026-03-20 20:55:52] 2026-03-21 00:55:02,700 | INFO     | sum of square deviations: 39697499433.982086
[2026-03-20 20:55:52] 2026-03-21 00:55:02,708 | INFO     | sum of deviations: 15851254596.482155
[2026-03-20 20:55:52] 2026-03-21 00:55:02,708 | INFO     | mean x: 1774039114.5892856
[2026-03-20 20:55:52] 2026-03-21 00:55:02,708 | INFO     | mean y: 2749657.978174603
[2026-03-20 20:55:52] 2026-03-21 00:55:02,708 | INFO     | intersect: -705626085.3413268
[2026-03-20 20:55:52] 2026-03-21 00:55:02,709 | INFO     | chi2: 3.30006313049652
[2026-03-20 20:55:52] 2026-03-21 00:55:02,710 | INFO     | sum of square deviations: 38527858892.98994
[2026-03-20 20:55:52] 2026-03-21 00:55:02,718 | INFO     | sum of deviations: 54863170729.52711
[2026-03-20 20:55:52] 2026-03-21 00:55:02,718 | INFO     | mean x: 1774038962.1002004
[2026-03-20 20:55:52] 2026-03-21 00:55:02,718 | INFO     | mean y: 2754702.729458918
[2026-03-20 20:55:52] 2026-03-21 00:55:02,718 | INFO     | intersect: -2523453741.1102595
[2026-03-20 20:55:52] 2026-03-21 00:55:02,719 | INFO     | chi2: 2.4226400515918765
[2026-03-20 20:55:52] 2026-03-21 00:55:02,719 | INFO     | current chi2=2.4226400515918765 (change=26.58806950679845 %)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,720 | INFO     | sum of square deviations: 37381306824.234825
[2026-03-20 20:55:52] 2026-03-21 00:55:02,728 | INFO     | sum of deviations: 53865470343.55464
[2026-03-20 20:55:52] 2026-03-21 00:55:02,728 | INFO     | mean x: 1774038809.6032388
[2026-03-20 20:55:52] 2026-03-21 00:55:02,728 | INFO     | mean y: 2754570.0283400808
[2026-03-20 20:55:52] 2026-03-21 00:55:02,728 | INFO     | intersect: -2553588238.8604527
[2026-03-20 20:55:52] 2026-03-21 00:55:02,729 | INFO     | chi2: 2.422882613590179
[2026-03-20 20:55:52] 2026-03-21 00:55:02,729 | INFO     | current chi2=2.422882613590179 (change=-0.01001230034743518 %)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,729 | INFO     | right removable region: 493
[2026-03-20 20:55:52] 2026-03-21 00:55:02,730 | INFO     | sum of square deviations: 38527524002.98996
[2026-03-20 20:55:52] 2026-03-21 00:55:02,737 | INFO     | sum of deviations: -97551955747.90375
[2026-03-20 20:55:52] 2026-03-21 00:55:02,737 | INFO     | mean x: 1774039267.1002004
[2026-03-20 20:55:52] 2026-03-21 00:55:02,738 | INFO     | mean y: 2764393.038076152
[2026-03-20 20:55:52] 2026-03-21 00:55:02,738 | INFO     | intersect: 4494644018.258005
[2026-03-20 20:55:52] 2026-03-21 00:55:02,738 | INFO     | chi2: 1.3205323327426886
[2026-03-20 20:55:52] 2026-03-21 00:55:02,739 | INFO     | current chi2=1.3205323327426886 (change=59.98463421686105 %)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,739 | INFO     | sum of square deviations: 37380758309.37659
[2026-03-20 20:55:52] 2026-03-21 00:55:02,746 | INFO     | sum of deviations: -112865932990.0568
[2026-03-20 20:55:52] 2026-03-21 00:55:02,747 | INFO     | mean x: 1774039419.611336
[2026-03-20 20:55:52] 2026-03-21 00:55:02,747 | INFO     | mean y: 2766426.5101214573
[2026-03-20 20:55:52] 2026-03-21 00:55:02,747 | INFO     | intersect: 5359228502.490719
[2026-03-20 20:55:52] 2026-03-21 00:55:02,748 | INFO     | chi2: 1.279825320744511
[2026-03-20 20:55:52] 2026-03-21 00:55:02,748 | INFO     | current chi2=1.279825320744511 (change=3.0826213784278123 %)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,748 | INFO     | left removable region: 20
[2026-03-20 20:55:52] 2026-03-21 00:55:02,749 | INFO     | sum of square deviations: 32813604440.130974
[2026-03-20 20:55:52] 2026-03-21 00:55:02,755 | INFO     | sum of deviations: -41256512449.91535
[2026-03-20 20:55:52] 2026-03-21 00:55:02,755 | INFO     | mean x: 1774039389.1205075
[2026-03-20 20:55:52] 2026-03-21 00:55:02,756 | INFO     | mean y: 2767217.980972516
[2026-03-20 20:55:52] 2026-03-21 00:55:02,756 | INFO     | intersect: 2233265189.5594435
[2026-03-20 20:55:52] 2026-03-21 00:55:02,756 | INFO     | chi2: 0.3205101727728751
[2026-03-20 20:55:52] 2026-03-21 00:55:02,757 | INFO     | current memory leak: -1.26 B/s (using 473 data points, chi2=0.32)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,758 | INFO     | could have reported an average CPU frequency of 2453 MHz (21 samples)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,758 | INFO     | ..............................
[2026-03-20 20:55:52] 2026-03-21 00:55:02,758 | INFO     | . Timing measurements:
[2026-03-20 20:55:52] 2026-03-21 00:55:02,758 | INFO     | . get job = 0 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,758 | INFO     | . initial setup = 24 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,758 | INFO     | . payload setup = 35 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,759 | INFO     | . stage-in = 0 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,759 | INFO     | . payload execution = 30742 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,759 | INFO     | . stage-out = 2 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,759 | INFO     | . log creation = 0 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,759 | INFO     | ..............................
[2026-03-20 20:55:52] 2026-03-21 00:55:02,870 | INFO     | 
[2026-03-20 20:55:52] 2026-03-21 00:55:02,870 | INFO     | job summary report
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | --------------------------------------------------
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | PanDA job id: 7051653219
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | task id: 48967067
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | errors: (none)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | pilot state: finished 
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | transexitcode: 0
[2026-03-20 20:55:52] 2026-03-21 00:55:02,871 | INFO     | exeerrorcode: 0
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | exeerrordiag: 
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | exitcode: 0
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | exitmsg: OK
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | cpuconsumptiontime: 130007 s
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | nevents: 400
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | neventsw: 0
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | pid: 544494
[2026-03-20 20:55:52] 2026-03-21 00:55:02,872 | INFO     | pgrp: 544494
[2026-03-20 20:55:52] 2026-03-21 00:55:02,873 | INFO     | corecount: 12
[2026-03-20 20:55:52] 2026-03-21 00:55:02,873 | INFO     | event service: False
[2026-03-20 20:55:52] 2026-03-21 00:55:02,873 | INFO     | sizes: {0: 2279791, 1: 2279875, 2: 2280336, 3: 2280336, 30782: 2318546, 30785: 2327544, 30786: 2327728, 30787: 2327922}
[2026-03-20 20:55:52] 2026-03-21 00:55:02,873 | INFO     | --------------------------------------------------
[2026-03-20 20:55:52] 2026-03-21 00:55:02,873 | INFO     | 
[2026-03-20 20:55:52] 2026-03-21 00:55:02,873 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-20 20:55:52] 2026-03-21 00:55:02,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,917 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,920 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 20:55:52] 2026-03-21 00:55:02,920 | INFO     | job 7051653219 has completed (purged errors)
[2026-03-20 20:55:52] 2026-03-21 00:55:02,920 | INFO     | overall cleanup function is called
[2026-03-20 20:55:52] 2026-03-21 00:55:03,929 | INFO     | --- collectZombieJob: --- 10, [544494]
[2026-03-20 20:55:52] 2026-03-21 00:55:03,929 | INFO     | zombie collector waiting for pid 544494
[2026-03-20 20:55:52] 2026-03-21 00:55:03,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 20:55:52] 2026-03-21 00:55:03,931 | INFO     | collected zombie processes
[2026-03-20 20:55:52] 2026-03-21 00:55:03,931 | INFO     | will attempt to kill all subprocesses of pid=544494
[2026-03-20 20:55:52] 2026-03-21 00:55:04,246 | INFO     | PID=538410 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 20:55:52] 2026-03-21 00:55:04,247 | INFO     | .. there are 7 such processes running
[2026-03-20 20:55:52] 2026-03-21 00:55:04,384 | INFO     | process IDs to be killed: [544494] (in reverse order)
[2026-03-20 20:55:52] 2026-03-21 00:55:04,469 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 20:55:52] 2026-03-21 00:55:04,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 20:55:52] 2026-03-21 00:55:04,479 | INFO     | did not find any defunct processes belonging to 544494
[2026-03-20 20:55:52] 2026-03-21 00:55:04,488 | INFO     | did not find any defunct processes belonging to 544494
[2026-03-20 20:55:52] 2026-03-21 00:55:04,488 | INFO     | ready for new job
[2026-03-20 20:55:52] 2026-03-21 00:55:04,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 20:55:52] 2026-03-21 00:55:04,492 | INFO     | **************************************
[2026-03-20 20:55:52] 2026-03-21 00:55:04,492 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 20:55:52] 2026-03-21 00:55:04,492 | INFO     | **************************************
[2026-03-20 20:55:52] 2026-03-21 00:55:04,492 | INFO     | 
[2026-03-20 20:55:52] 2026-03-21 00:55:04,495 | INFO     | architecture information:
[2026-03-20 20:55:52] 2026-03-21 00:55:04,496 | INFO     | executing command: cat /etc/os-release
[2026-03-20 20:55:52] 2026-03-21 00:55:04,511 | INFO     | cat /etc/os-release:
[2026-03-20 20:55:52] NAME="CentOS Linux"
[2026-03-20 20:55:52] VERSION="7 (Core)"
[2026-03-20 20:55:52] ID="centos"
[2026-03-20 20:55:52] ID_LIKE="rhel fedora"
[2026-03-20 20:55:52] VERSION_ID="7"
[2026-03-20 20:55:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 20:55:52] ANSI_COLOR="0;31"
[2026-03-20 20:55:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 20:55:52] HOME_URL="https://www.centos.org/"
[2026-03-20 20:55:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 20:55:52] 
[2026-03-20 20:55:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 20:55:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 20:55:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 20:55:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 20:55:52] 
[2026-03-20 20:55:52] 2026-03-21 00:55:04,512 | INFO     | **************************************
[2026-03-20 20:55:52] 2026-03-21 00:55:05,014 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-20 20:55:52] 2026-03-21 00:55:05,031 | INFO     | sufficient remaining disk space (64381517824 B)
[2026-03-20 20:55:52] 2026-03-21 00:55:05,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 20:55:52] 2026-03-21 00:55:05,032 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 20:55:52] 2026-03-21 00:55:05,032 | INFO     | update_server=False
[2026-03-20 20:55:52] 2026-03-21 00:55:05,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 20:55:52] 2026-03-21 00:55:05,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 20:55:52] 2026-03-21 00:55:05,033 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-20 20:55:52] 2026-03-21 00:55:05,033 | INFO     | aborting loop
[2026-03-20 20:55:52] 2026-03-21 00:55:05,033 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 20:55:52] 2026-03-21 00:55:05,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 20:55:52] 2026-03-21 00:55:05,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 20:55:52] 2026-03-21 00:55:05,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 20:55:52] 2026-03-21 00:55:06,031 | INFO     | all job control threads have been joined
[2026-03-20 20:55:52] 2026-03-21 00:55:06,037 | INFO     | [job] retrieve thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:06,039 | INFO     | [job] job monitor thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:06,043 | INFO     | all data control threads have been joined
[2026-03-20 20:55:52] 2026-03-21 00:55:06,101 | INFO     | [payload] failed_post thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:06,537 | INFO     | all payload control threads have been joined
[2026-03-20 20:55:52] 2026-03-21 00:55:06,608 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:06,609 | INFO     | [data] copytool_in thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:06,609 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:06,611 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:07,036 | INFO     | [job] control thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:07,048 | INFO     | [data] control thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:07,103 | INFO     | [job] validate thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:07,135 | INFO     | [payload] validate_post thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:07,383 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:07,542 | INFO     | [payload] control thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:07,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 20:55:52] 2026-03-21 00:55:07,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 20:55:52] 2026-03-21 00:55:07,952 | INFO     | [data] copytool_out thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:08,886 | INFO     | [job] queue monitor thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:11,882 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 20:55:52] 2026-03-21 00:55:47,161 | INFO     | [monitor] cgroup control has ended
[2026-03-20 20:55:52] 2026-03-21 00:55:47,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949753558848)>', '<ExcThread(monitor, started 139949386999552)>']
[2026-03-20 20:55:52] 2026-03-21 00:55:48,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 20:55:52] 2026-03-21 00:55:48,233 | INFO     | [monitor] control thread has ended
[2026-03-20 20:55:52] 2026-03-21 00:55:52,339 | INFO     | all workflow threads have been joined
[2026-03-20 20:55:52] 2026-03-21 00:55:52,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 20:55:52] 2026-03-21 00:55:52,340 | INFO     | traces error code: 0
[2026-03-20 20:55:52] 2026-03-21 00:55:52,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 20:55:52] 2026-03-21 00:55:52,494 [wrapper] ==== pilot stdout END ====
[2026-03-20 20:55:52] 2026-03-21 00:55:52,497 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 20:55:52] 2026-03-21 00:55:52,499 [wrapper] pilotpid: 538410
[2026-03-20 20:55:52] 2026-03-21 00:55:52,502 [wrapper] Pilot exit status: 0
[2026-03-20 20:55:52] 2026-03-21 00:55:52,514 [wrapper] pandaids: 7051653219
[2026-03-20 20:55:52] 2026-03-21 00:55:52,569 [wrapper] cleanup supervisor_pilot 1322772 538411
[2026-03-20 20:55:52] 2026-03-21 00:55:52,571 [wrapper] Test setup, not cleaning
[2026-03-20 20:55:52] 2026-03-21 00:55:52,573 [wrapper] apfmon messages muted
[2026-03-20 20:55:52] 2026-03-21 00:55:52,576 [wrapper] ==== wrapper stdout END ====
[2026-03-20 20:55:52] 2026-03-21 00:55:52,579 [wrapper] ==== wrapper stderr END ====
[2026-03-20 20:55:52]  *** Error codes and diagnostics ***
[2026-03-20 20:55:52]     "exeErrorCode": 0,
[2026-03-20 20:55:52]     "exeErrorDiag": "",
[2026-03-20 20:55:52]     "pilotErrorCode": 0,
[2026-03-20 20:55:52]     "pilotErrorDiag": "",
[2026-03-20 20:55:52]  *** Listing of results directory ***
[2026-03-20 20:55:52] total 515036
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 06:21 pilot3.tar.gz
[2026-03-20 20:55:52] -rwx------. 1 boincer umatlas     36322 Mar 12 06:24 runpilot2-wrapper.sh
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 06:26 queuedata.json
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas       100 Mar 20 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 20:55:52] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 20 12:20 run_atlas
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas       105 Mar 20 12:20 job.xml
[2026-03-20 20:55:52] -rw-r--r--. 2 boincer umatlas 239935964 Mar 20 12:20 EVNT.48967065._000087.pool.root.1
[2026-03-20 20:55:52] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 12:20 start_atlas.sh
[2026-03-20 20:55:52] drwxrwx--x. 2 boincer umatlas      4096 Mar 20 12:20 shared
[2026-03-20 20:55:52] -rw-r--r--. 2 boincer umatlas    597550 Mar 20 12:20 input.tar.gz
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas         0 Mar 20 12:20 boinc_lockfile
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas      2614 Mar 20 12:20 pandaJob.out
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas        57 Mar 20 12:20 setup.sh.local
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas   1010639 Mar 20 12:21 agis_schedconf.cvmfs.json
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas       441 Mar 20 12:21 workernode_map.json
[2026-03-20 20:55:52] drwx------. 5 boincer umatlas      4096 Mar 20 12:21 pilot3
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas 274497476 Mar 20 20:54 HITS.48967067._002229.pool.root.1
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas        95 Mar 20 20:54 pilot_heartbeat.json
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas       531 Mar 20 20:54 boinc_task_state.xml
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas      1042 Mar 20 20:54 memory_monitor_summary.json
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas   1511579 Mar 20 20:54 agis_ddmendpoints.agis.ALL.json
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas    737007 Mar 20 20:55 log.48967067._002229.job.log.tgz.1
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas      6391 Mar 20 20:55 heartbeat.json
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas      6615 Mar 20 20:55 init_data.xml
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas      8192 Mar 20 20:55 boinc_mmap_file
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas      4548 Mar 20 20:55 pilotlog.txt
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas        29 Mar 20 20:55 wrapper_checkpoint.txt
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas   3774854 Mar 20 20:55 log.48967067._002229.job.log.1
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas       357 Mar 20 20:55 output.list
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas       620 Mar 20 20:55 runtime_log
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas   4526080 Mar 20 20:55 result.tar.gz
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas      9344 Mar 20 20:55 runtime_log.err
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas       659 Mar 20 20:55 oh7MDmWOsK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZujLDmZrSaGm.diag
[2026-03-20 20:55:52] -rw-r--r--. 1 boincer umatlas     21158 Mar 20 20:55 stderr.txt
[2026-03-20 20:55:52] HITS file was successfully produced:
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas 274497476 Mar 20 20:54 shared/HITS.pool.root.1
[2026-03-20 20:55:52]  *** Contents of shared directory: ***
[2026-03-20 20:55:52] total 507408
[2026-03-20 20:55:52] -rw-r--r--. 2 boincer umatlas 239935964 Mar 20 12:20 ATLAS.root_0
[2026-03-20 20:55:52] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 12:20 start_atlas.sh
[2026-03-20 20:55:52] -rw-r--r--. 2 boincer umatlas    597550 Mar 20 12:20 input.tar.gz
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas 274497476 Mar 20 20:54 HITS.pool.root.1
[2026-03-20 20:55:52] -rw-------. 1 boincer umatlas   4526080 Mar 20 20:55 result.tar.gz
20:55:54 (534281): run_atlas exited; CPU time 130854.689240
20:55:54 (534281): called boinc_finish(0)

</stderr_txt>
]]>

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