Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:43:58 (3650593): wrapper (7.7.26015): starting
08:43:58 (3650593): wrapper: running run_atlas (--nthreads 4)
[2026-03-20 08:43:58] Arguments: --nthreads 4
[2026-03-20 08:43:58] Threads: 4
[2026-03-20 08:43:58] Checking for CVMFS
[2026-03-20 08:43:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 08:43:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 08:43:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 08:43:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 08:43:58] 2.11.5.0 3649900 0 26580 157502 3 4 3952866 4096001 19 130560 0 737 99.730 2327 4527 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-20 08:43:58] CVMFS is ok
[2026-03-20 08:43:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 08:43:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-20 08:43:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-20 08:43:58] Further information can be found at the LHC@home message board.
[2026-03-20 08:43:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 08:43:58] Checking for apptainer binary...
[2026-03-20 08:43:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 08:43:58] Running /usr/bin/apptainer --version
[2026-03-20 08:43:58] apptainer version 1.4.5
[2026-03-20 08:43:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 08:43:59] x32-linux3
[2026-03-20 08:43:59] apptainer works
[2026-03-20 08:43:59] Set ATHENA_PROC_NUMBER=4
[2026-03-20 08:43:59] Set ATHENA_CORE_NUMBER=4
[2026-03-20 08:43:59] Starting ATLAS job with PandaID=7057015703
[2026-03-20 08:43:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 11:54:53]  *** The last 200 lines of the pilot log: ***
[2026-03-20 11:54:53] 2026-03-20 15:54:21,278 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 11:54:53] 2026-03-20 15:54:21,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 11:54:53] 2026-03-20 15:54:21,278 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 11:54:53] 2026-03-20 15:54:21,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 11:54:53] 2026-03-20 15:54:21,281 | INFO     | fitting pss+swap vs Time
[2026-03-20 11:54:53] 2026-03-20 15:54:21,282 | INFO     | sum of square deviations: 2027639878.0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,282 | INFO     | sum of deviations: 13929712462.000002
[2026-03-20 11:54:53] 2026-03-20 15:54:21,282 | INFO     | mean x: 1774016347.0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,282 | INFO     | mean y: 2318506.0320855617
[2026-03-20 11:54:53] 2026-03-20 15:54:21,283 | INFO     | intersect: -12185021999.90248
[2026-03-20 11:54:53] 2026-03-20 15:54:21,283 | INFO     | chi2: 1.1036248975330365
[2026-03-20 11:54:53] 2026-03-20 15:54:21,283 | INFO     | sum of square deviations: 1869302025.5
[2026-03-20 11:54:53] 2026-03-20 15:54:21,284 | INFO     | sum of deviations: 13471882055.5
[2026-03-20 11:54:53] 2026-03-20 15:54:21,284 | INFO     | mean x: 1774016194.5
[2026-03-20 11:54:53] 2026-03-20 15:54:21,284 | INFO     | mean y: 2318064.9835164836
[2026-03-20 11:54:53] 2026-03-20 15:54:21,284 | INFO     | intersect: -12782848061.639795
[2026-03-20 11:54:53] 2026-03-20 15:54:21,284 | INFO     | chi2: 1.1042822171472164
[2026-03-20 11:54:53] 2026-03-20 15:54:21,284 | INFO     | current chi2=1.1042822171472164 (change=-0.059560056650519895 %)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,284 | INFO     | right removable region: 181
[2026-03-20 11:54:53] 2026-03-20 15:54:21,285 | INFO     | sum of square deviations: 1869302025.5
[2026-03-20 11:54:53] 2026-03-20 15:54:21,285 | INFO     | sum of deviations: -4272772755.000001
[2026-03-20 11:54:53] 2026-03-20 15:54:21,285 | INFO     | mean x: 1774016499.5
[2026-03-20 11:54:53] 2026-03-20 15:54:21,285 | INFO     | mean y: 2335742.6263736263
[2026-03-20 11:54:53] 2026-03-20 15:54:21,286 | INFO     | intersect: 4057308808.8202043
[2026-03-20 11:54:53] 2026-03-20 15:54:21,286 | INFO     | chi2: 0.007928696329418013
[2026-03-20 11:54:53] 2026-03-20 15:54:21,286 | INFO     | current chi2=0.007928696329418013 (change=99.28157688838469 %)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,286 | INFO     | sum of square deviations: 1719429448.0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,287 | INFO     | sum of deviations: -3745891781.9999995
[2026-03-20 11:54:53] 2026-03-20 15:54:21,287 | INFO     | mean x: 1774016652.0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,287 | INFO     | mean y: 2335203.802259887
[2026-03-20 11:54:53] 2026-03-20 15:54:21,287 | INFO     | intersect: 3867148852.0665603
[2026-03-20 11:54:53] 2026-03-20 15:54:21,288 | INFO     | chi2: 0.007848928557620804
[2026-03-20 11:54:53] 2026-03-20 15:54:21,288 | INFO     | current chi2=0.007848928557620804 (change=1.006064155859332 %)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,288 | INFO     | left removable region: 20
[2026-03-20 11:54:53] 2026-03-20 15:54:21,288 | INFO     | sum of square deviations: 1294014960.0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,289 | INFO     | sum of deviations: -1730257496.9999998
[2026-03-20 11:54:53] 2026-03-20 15:54:21,289 | INFO     | mean x: 1774016774.0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,289 | INFO     | mean y: 2332838.8385093166
[2026-03-20 11:54:53] 2026-03-20 15:54:21,289 | INFO     | intersect: 2374411924.398118
[2026-03-20 11:54:53] 2026-03-20 15:54:21,289 | INFO     | chi2: 0.0060122168496043685
[2026-03-20 11:54:53] 2026-03-20 15:54:21,289 | INFO     | current memory leak: -1.34 B/s (using 161 data points, chi2=0.01)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | could have reported an average CPU frequency of 2331 MHz (10 samples)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | ..............................
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . Timing measurements:
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . get job = 0 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . initial setup = 5 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . payload setup = 7 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . stage-in = 0 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . payload execution = 11380 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . stage-out = 2 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,290 | INFO     | . log creation = 0 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,291 | INFO     | ..............................
[2026-03-20 11:54:53] 2026-03-20 15:54:21,355 | INFO     | 
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | job summary report
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | --------------------------------------------------
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | PanDA job id: 7057015703
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | task id: 49176776
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | errors: (none)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | pilot state: finished 
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | transexitcode: 0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | exeerrorcode: 0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | exeerrordiag: 
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | exitcode: 0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,356 | INFO     | exitmsg: OK
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | cpuconsumptiontime: 44682 s
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | nevents: 400
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | neventsw: 0
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | pid: 3686364
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | pgrp: 3686364
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | corecount: 4
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | event service: False
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | sizes: {0: 2279871, 1: 2280332, 11: 2280332, 11392: 2309821, 11395: 2318833, 11398: 2319211}
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | --------------------------------------------------
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | 
[2026-03-20 11:54:53] 2026-03-20 15:54:21,357 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-20 11:54:53] 2026-03-20 15:54:21,371 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 11:54:53] 2026-03-20 15:54:21,373 | INFO     | job 7057015703 has completed (purged errors)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,374 | INFO     | overall cleanup function is called
[2026-03-20 11:54:53] 2026-03-20 15:54:21,480 | WARNING  | process 3686364 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 11:54:53] 2026-03-20 15:54:21,572 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,573 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,573 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-20 11:54:53] 2026-03-20 15:54:21,573 | WARNING  | maxPSS not found in memory monitor output
[2026-03-20 11:54:53] 2026-03-20 15:54:21,573 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/1/PanDA_Pilot-7057015703/payload.stdout) since it has not been created yet
[2026-03-20 11:54:53] 2026-03-20 15:54:21,573 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-20 11:54:53] 2026-03-20 15:54:21,586 | INFO     | sufficient remaining disk space (397832880128 B)
[2026-03-20 11:54:53] 2026-03-20 15:54:21,586 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-20 11:54:53] 2026-03-20 15:54:21,586 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-7057015703/HITS.49176776._000239.pool.root.1 since it does not exist
[2026-03-20 11:54:53] 2026-03-20 15:54:21,707 | INFO     | number of running child processes to parent process 3686364: 1
[2026-03-20 11:54:53] 2026-03-20 15:54:21,707 | INFO     | maximum number of monitored processes: 6
[2026-03-20 11:54:53] 2026-03-20 15:54:21,707 | INFO     | aborting job monitoring since job object (job id=7057015703) has expired
[2026-03-20 11:54:53] 2026-03-20 15:54:22,381 | INFO     | --- collectZombieJob: --- 10, [3686364]
[2026-03-20 11:54:53] 2026-03-20 15:54:22,382 | INFO     | zombie collector waiting for pid 3686364
[2026-03-20 11:54:53] 2026-03-20 15:54:22,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 11:54:53] 2026-03-20 15:54:22,382 | INFO     | collected zombie processes
[2026-03-20 11:54:53] 2026-03-20 15:54:22,382 | INFO     | will attempt to kill all subprocesses of pid=3686364
[2026-03-20 11:54:53] 2026-03-20 15:54:22,497 | INFO     | process IDs to be killed: [3686364] (in reverse order)
[2026-03-20 11:54:53] 2026-03-20 15:54:22,546 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 11:54:53] 2026-03-20 15:54:22,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 11:54:53] 2026-03-20 15:54:22,550 | INFO     | did not find any defunct processes belonging to 3686364
[2026-03-20 11:54:53] 2026-03-20 15:54:22,553 | INFO     | did not find any defunct processes belonging to 3686364
[2026-03-20 11:54:53] 2026-03-20 15:54:22,553 | INFO     | ready for new job
[2026-03-20 11:54:53] 2026-03-20 15:54:22,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 11:54:53] 2026-03-20 15:54:22,555 | INFO     | **************************************
[2026-03-20 11:54:53] 2026-03-20 15:54:22,555 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 11:54:53] 2026-03-20 15:54:22,555 | INFO     | **************************************
[2026-03-20 11:54:53] 2026-03-20 15:54:22,555 | INFO     | 
[2026-03-20 11:54:53] 2026-03-20 15:54:22,574 | INFO     | architecture information:
[2026-03-20 11:54:53] 2026-03-20 15:54:22,574 | INFO     | executing command: cat /etc/os-release
[2026-03-20 11:54:53] 2026-03-20 15:54:22,585 | INFO     | cat /etc/os-release:
[2026-03-20 11:54:53] NAME="CentOS Linux"
[2026-03-20 11:54:53] VERSION="7 (Core)"
[2026-03-20 11:54:53] ID="centos"
[2026-03-20 11:54:53] ID_LIKE="rhel fedora"
[2026-03-20 11:54:53] VERSION_ID="7"
[2026-03-20 11:54:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 11:54:53] ANSI_COLOR="0;31"
[2026-03-20 11:54:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 11:54:53] HOME_URL="https://www.centos.org/"
[2026-03-20 11:54:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 11:54:53] 
[2026-03-20 11:54:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 11:54:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 11:54:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 11:54:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 11:54:53] 
[2026-03-20 11:54:53] 2026-03-20 15:54:22,586 | INFO     | **************************************
[2026-03-20 11:54:53] 2026-03-20 15:54:23,088 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-20 11:54:53] 2026-03-20 15:54:23,108 | INFO     | sufficient remaining disk space (397834977280 B)
[2026-03-20 11:54:53] 2026-03-20 15:54:23,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 11:54:53] 2026-03-20 15:54:23,108 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 11:54:53] 2026-03-20 15:54:23,108 | INFO     | update_server=False
[2026-03-20 11:54:53] 2026-03-20 15:54:23,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 11:54:53] 2026-03-20 15:54:23,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:54:53] 2026-03-20 15:54:23,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 11:54:53] 2026-03-20 15:54:23,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:54:53] 2026-03-20 15:54:23,109 | INFO     | aborting loop
[2026-03-20 11:54:53] 2026-03-20 15:54:23,328 | INFO     | all job control threads have been joined
[2026-03-20 11:54:53] 2026-03-20 15:54:23,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 11:54:53] 2026-03-20 15:54:23,604 | INFO     | all data control threads have been joined
[2026-03-20 11:54:53] 2026-03-20 15:54:23,656 | INFO     | all payload control threads have been joined
[2026-03-20 11:54:53] 2026-03-20 15:54:24,112 | INFO     | [job] retrieve thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,113 | INFO     | [job] job monitor thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,114 | INFO     | [job] queue monitor thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,332 | INFO     | [job] control thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,336 | INFO     | [payload] failed_post thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,610 | INFO     | [data] control thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,660 | INFO     | [payload] control thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,920 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:24,938 | INFO     | [job] validate thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:25,040 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:25,339 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:25,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:25,567 | INFO     | [data] copytool_in thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:25,576 | INFO     | [payload] validate_post thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:25,586 | INFO     | [data] copytool_out thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:27,112 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 11:54:53] 2026-03-20 15:54:29,996 | INFO     | [monitor] cgroup control has ended
[2026-03-20 11:54:53] 2026-03-20 15:54:30,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956944537408)>', '<ExcThread(monitor, started 139956508931840)>']
[2026-03-20 11:54:53] 2026-03-20 15:54:35,050 | INFO     | all workflow threads have been joined
[2026-03-20 11:54:53] 2026-03-20 15:54:35,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 11:54:53] 2026-03-20 15:54:35,051 | INFO     | traces error code: 0
[2026-03-20 11:54:53] 2026-03-20 15:54:35,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 11:54:53] 2026-03-20 15:54:53,216 | INFO     | PID=3658333 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 11:54:53] 2026-03-20 15:54:53,217 | INFO     | .. there are 6 such processes running
[2026-03-20 11:54:53] 2026-03-20 15:54:53,217 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 11:54:53] 2026-03-20 15:54:53,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 11:54:53] 2026-03-20 15:54:53,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 11:54:53] 2026-03-20 15:54:53,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 11:54:53] 2026-03-20 15:54:53,217 | INFO     | [monitor] control thread has ended
[2026-03-20 11:54:53] 2026-03-20 15:54:53,294 [wrapper] ==== pilot stdout END ====
[2026-03-20 11:54:53] 2026-03-20 15:54:53,296 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 11:54:53] 2026-03-20 15:54:53,298 [wrapper] pilotpid: 3658333
[2026-03-20 11:54:53] 2026-03-20 15:54:53,300 [wrapper] Pilot exit status: 0
[2026-03-20 11:54:53] 2026-03-20 15:54:53,308 [wrapper] pandaids: 7057015703
[2026-03-20 11:54:53] 2026-03-20 15:54:53,338 [wrapper] cleanup supervisor_pilot 3733454 3658335
[2026-03-20 11:54:53] 2026-03-20 15:54:53,340 [wrapper] Test setup, not cleaning
[2026-03-20 11:54:53] 2026-03-20 15:54:53,342 [wrapper] apfmon messages muted
[2026-03-20 11:54:53] 2026-03-20 15:54:53,344 [wrapper] ==== wrapper stdout END ====
[2026-03-20 11:54:53] 2026-03-20 15:54:53,346 [wrapper] ==== wrapper stderr END ====
[2026-03-20 11:54:53]  *** Error codes and diagnostics ***
[2026-03-20 11:54:53]     "exeErrorCode": 0,
[2026-03-20 11:54:53]     "exeErrorDiag": "",
[2026-03-20 11:54:53]     "pilotErrorCode": 0,
[2026-03-20 11:54:53]     "pilotErrorDiag": "",
[2026-03-20 11:54:53]  *** Listing of results directory ***
[2026-03-20 11:54:53] total 410864
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc    585013 Mar 16 20:33 pilot3.tar.gz
[2026-03-20 11:54:53] -rwx------ 1 boinc boinc     36322 Mar 16 20:34 runpilot2-wrapper.sh
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc      5111 Mar 16 20:35 queuedata.json
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc       100 Mar 20 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 11:54:53] -rwxr-xr-x 1 boinc boinc      7986 Mar 20 08:43 run_atlas
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc       105 Mar 20 08:43 job.xml
[2026-03-20 11:54:53] -rw-r--r-- 2 boinc boinc     15845 Mar 20 08:43 start_atlas.sh
[2026-03-20 11:54:53] drwxrwx--x 2 boinc boinc      4096 Mar 20 08:43 shared
[2026-03-20 11:54:53] -rw-r--r-- 2 boinc boinc    597545 Mar 20 08:43 input.tar.gz
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc      9156 Mar 20 08:43 init_data.xml
[2026-03-20 11:54:53] -rw-r--r-- 2 boinc boinc 217514605 Mar 20 08:43 EVNT.49135185._000010.pool.root.1
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc         0 Mar 20 08:43 boinc_setup_complete
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc         0 Mar 20 08:43 boinc_lockfile
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc      2614 Mar 20 08:43 pandaJob.out
[2026-03-20 11:54:53] -rw------- 1 boinc boinc   1008614 Mar 20 08:44 agis_schedconf.cvmfs.json
[2026-03-20 11:54:53] -rw------- 1 boinc boinc       418 Mar 20 08:44 workernode_map.json
[2026-03-20 11:54:53] drwx------ 5 boinc boinc      4096 Mar 20 08:44 pilot3
[2026-03-20 11:54:53] -rw------- 1 boinc boinc 195245319 Mar 20 11:53 HITS.49176776._000239.pool.root.1
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc       530 Mar 20 11:53 boinc_task_state.xml
[2026-03-20 11:54:53] -rw------- 1 boinc boinc      1024 Mar 20 11:54 memory_monitor_summary.json
[2026-03-20 11:54:53] -rw------- 1 boinc boinc   1511579 Mar 20 11:54 agis_ddmendpoints.agis.ALL.json
[2026-03-20 11:54:53] -rw------- 1 boinc boinc    364304 Mar 20 11:54 log.49176776._000239.job.log.tgz.1
[2026-03-20 11:54:53] -rw------- 1 boinc boinc      6283 Mar 20 11:54 heartbeat.json
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc      8192 Mar 20 11:54 boinc_mmap_file
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc        28 Mar 20 11:54 wrapper_checkpoint.txt
[2026-03-20 11:54:53] -rw------- 1 boinc boinc       822 Mar 20 11:54 pilotlog.txt
[2026-03-20 11:54:53] -rw------- 1 boinc boinc        95 Mar 20 11:54 pilot_heartbeat.json
[2026-03-20 11:54:53] -rw------- 1 boinc boinc   1647113 Mar 20 11:54 log.49176776._000239.job.log.1
[2026-03-20 11:54:53] -rw------- 1 boinc boinc       357 Mar 20 11:54 output.list
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc       620 Mar 20 11:54 runtime_log
[2026-03-20 11:54:53] -rw------- 1 boinc boinc   2027520 Mar 20 11:54 result.tar.gz
[2026-03-20 11:54:53] -rw------- 1 boinc boinc       648 Mar 20 11:54 vHOKDmIZXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9EwLDmYvEXDn.diag
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc      8892 Mar 20 11:54 runtime_log.err
[2026-03-20 11:54:53] -rw-r--r-- 1 boinc boinc     21568 Mar 20 11:54 stderr.txt
[2026-03-20 11:54:53] HITS file was successfully produced:
[2026-03-20 11:54:53] -rw------- 1 boinc boinc 195245319 Mar 20 11:53 shared/HITS.pool.root.1
[2026-03-20 11:54:53]  *** Contents of shared directory: ***
[2026-03-20 11:54:53] total 405680
[2026-03-20 11:54:53] -rw-r--r-- 2 boinc boinc     15845 Mar 20 08:43 start_atlas.sh
[2026-03-20 11:54:53] -rw-r--r-- 2 boinc boinc    597545 Mar 20 08:43 input.tar.gz
[2026-03-20 11:54:53] -rw-r--r-- 2 boinc boinc 217514605 Mar 20 08:43 ATLAS.root_0
[2026-03-20 11:54:53] -rw------- 1 boinc boinc 195245319 Mar 20 11:53 HITS.pool.root.1
[2026-03-20 11:54:53] -rw------- 1 boinc boinc   2027520 Mar 20 11:54 result.tar.gz
11:54:55 (3650593): run_atlas exited; CPU time 44810.138552
11:54:55 (3650593): called boinc_finish(0)

</stderr_txt>
]]>

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