Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:43:54 (3649692): wrapper (7.7.26015): starting
08:43:54 (3649692): wrapper: running run_atlas (--nthreads 4)
[2026-03-20 08:43:54] Arguments: --nthreads 4
[2026-03-20 08:43:54] Threads: 4
[2026-03-20 08:43:54] Checking for CVMFS
[2026-03-20 08:43:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 08:43:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 08:43:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 08:43:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 08:43:57] 2.11.5.0 3649900 0 25172 157502 3 1 3950968 4096001 0 130560 0 0 0.000 1337 2768 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-20 08:43:57] CVMFS is ok
[2026-03-20 08:43:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 08:43:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-20 08:43:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-20 08:43:57] Further information can be found at the LHC@home message board.
[2026-03-20 08:43:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 08:43:57] Checking for apptainer binary...
[2026-03-20 08:43:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 08:43:57] Running /usr/bin/apptainer --version
[2026-03-20 08:43:57] apptainer version 1.4.5
[2026-03-20 08:43:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 08:43:57] x32-linux3
[2026-03-20 08:43:57] apptainer works
[2026-03-20 08:43:57] Set ATHENA_PROC_NUMBER=4
[2026-03-20 08:43:57] Set ATHENA_CORE_NUMBER=4
[2026-03-20 08:43:57] Starting ATLAS job with PandaID=7056944987
[2026-03-20 08:43:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 13:18:42]  *** The last 200 lines of the pilot log: ***
[2026-03-20 13:18:42] 2026-03-20 17:17:35,473 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-20 13:18:42] 2026-03-20 17:17:35,473 | INFO     | this job has now completed (state=finished)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,473 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,473 | INFO     | log transfer has been attempted: DONE
[2026-03-20 13:18:42] 2026-03-20 17:17:35,473 | INFO     | job 7056944987 has finished - writing final server update
[2026-03-20 13:18:42] 2026-03-20 17:17:35,474 | INFO     | total number of processed events: 400 (read)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,499 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7056944987/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,499 | INFO     | extracted standard info from prmon json
[2026-03-20 13:18:42] 2026-03-20 17:17:35,499 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 13:18:42] 2026-03-20 17:17:35,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 13:18:42] 2026-03-20 17:17:35,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 13:18:42] 2026-03-20 17:17:35,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 13:18:42] 2026-03-20 17:17:35,503 | INFO     | fitting pss+swap vs Time
[2026-03-20 13:18:42] 2026-03-20 17:17:35,503 | INFO     | sum of square deviations: 6035722470.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,505 | INFO     | sum of deviations: 34333527370.999996
[2026-03-20 13:18:42] 2026-03-20 17:17:35,505 | INFO     | mean x: 1774018848.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,505 | INFO     | mean y: 2332491.8550185873
[2026-03-20 13:18:42] 2026-03-20 17:17:35,505 | INFO     | intersect: -10088973888.982914
[2026-03-20 13:18:42] 2026-03-20 17:17:35,505 | INFO     | chi2: 1.0990935278056757
[2026-03-20 13:18:42] 2026-03-20 17:17:35,505 | INFO     | sum of square deviations: 5705372090.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | sum of deviations: 32124565115.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | mean x: 1774018695.5
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | mean y: 2331471.765151515
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | intersect: -9986426176.260063
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | chi2: 1.098743876841496
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | current chi2=1.098743876841496 (change=0.03181266701457857 %)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | right removable region: 263
[2026-03-20 13:18:42] 2026-03-20 17:17:35,506 | INFO     | sum of square deviations: 5705372090.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,507 | INFO     | sum of deviations: 7594985712.500002
[2026-03-20 13:18:42] 2026-03-20 17:17:35,507 | INFO     | mean x: 1774019000.5
[2026-03-20 13:18:42] 2026-03-20 17:17:35,507 | INFO     | mean y: 2344693.7613636362
[2026-03-20 13:18:42] 2026-03-20 17:17:35,507 | INFO     | intersect: -2359227654.187118
[2026-03-20 13:18:42] 2026-03-20 17:17:35,507 | INFO     | chi2: 0.013624168944505861
[2026-03-20 13:18:42] 2026-03-20 17:17:35,507 | INFO     | current chi2=0.013624168944505861 (change=98.76041768968413 %)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,508 | INFO     | sum of square deviations: 5387301010.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,508 | INFO     | sum of deviations: 7577220835.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,508 | INFO     | mean x: 1774019153.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,508 | INFO     | mean y: 2344700.4787644786
[2026-03-20 13:18:42] 2026-03-20 17:17:35,508 | INFO     | intersect: -2492807299.1680217
[2026-03-20 13:18:42] 2026-03-20 17:17:35,509 | INFO     | chi2: 0.01345142909612485
[2026-03-20 13:18:42] 2026-03-20 17:17:35,509 | INFO     | current chi2=0.01345142909612485 (change=1.267892735950481 %)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,509 | INFO     | left removable region: 20
[2026-03-20 13:18:42] 2026-03-20 17:17:35,509 | INFO     | sum of square deviations: 4449281562.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,509 | INFO     | sum of deviations: 7756653067.000001
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | mean x: 1774019275.0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | mean y: 2342552.7489711936
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | intersect: -3090393175.1649075
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | chi2: 0.00928238414940234
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | current memory leak: 1.74 B/s (using 243 data points, chi2=0.01)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | could have reported an average CPU frequency of 2267 MHz (13 samples)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | ..............................
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . Timing measurements:
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . get job = 0 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . initial setup = 5 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . payload setup = 7 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . stage-in = 0 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . payload execution = 16376 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . stage-out = 1 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | . log creation = 0 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,510 | INFO     | ..............................
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | 
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | job summary report
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | --------------------------------------------------
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | PanDA job id: 7056944987
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | task id: 49178853
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | errors: (none)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 13:18:42] 2026-03-20 17:17:35,547 | INFO     | pilot state: finished 
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | transexitcode: 0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | exeerrorcode: 0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | exeerrordiag: 
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | exitcode: 0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | exitmsg: OK
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | cpuconsumptiontime: 64755 s
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | nevents: 400
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | neventsw: 0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | pid: 3686392
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | pgrp: 3686392
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | corecount: 4
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | event service: False
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | sizes: {0: 2279917, 1: 2280378, 11: 2280378, 16387: 2312403, 16390: 2321415, 16392: 2321793}
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | --------------------------------------------------
[2026-03-20 13:18:42] 2026-03-20 17:17:35,548 | INFO     | 
[2026-03-20 13:18:42] 2026-03-20 17:17:35,549 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | job 7056944987 has completed (purged errors)
[2026-03-20 13:18:42] 2026-03-20 17:17:35,567 | INFO     | overall cleanup function is called
[2026-03-20 13:18:42] 2026-03-20 17:17:36,521 | WARNING  | process 3686392 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 13:18:42] 2026-03-20 17:17:36,568 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 13:18:42] 2026-03-20 17:17:36,575 | INFO     | --- collectZombieJob: --- 10, [3686392]
[2026-03-20 13:18:42] 2026-03-20 17:17:36,575 | INFO     | zombie collector waiting for pid 3686392
[2026-03-20 13:18:42] 2026-03-20 17:17:36,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 13:18:42] 2026-03-20 17:17:36,575 | INFO     | collected zombie processes
[2026-03-20 13:18:42] 2026-03-20 17:17:36,575 | INFO     | will attempt to kill all subprocesses of pid=3686392
[2026-03-20 13:18:42] 2026-03-20 17:17:36,673 | INFO     | number of running child processes to parent process 3686392: 1
[2026-03-20 13:18:42] 2026-03-20 17:17:36,673 | INFO     | maximum number of monitored processes: 6
[2026-03-20 13:18:42] 2026-03-20 17:17:36,673 | INFO     | aborting job monitoring since job object (job id=7056944987) has expired
[2026-03-20 13:18:42] 2026-03-20 17:17:36,682 | INFO     | process IDs to be killed: [3686392] (in reverse order)
[2026-03-20 13:18:42] 2026-03-20 17:17:36,720 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 13:18:42] 2026-03-20 17:17:36,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 13:18:42] 2026-03-20 17:17:36,724 | INFO     | did not find any defunct processes belonging to 3686392
[2026-03-20 13:18:42] 2026-03-20 17:17:36,727 | INFO     | did not find any defunct processes belonging to 3686392
[2026-03-20 13:18:42] 2026-03-20 17:17:36,727 | INFO     | ready for new job
[2026-03-20 13:18:42] 2026-03-20 17:17:36,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 13:18:42] 2026-03-20 17:17:36,729 | INFO     | **************************************
[2026-03-20 13:18:42] 2026-03-20 17:17:36,729 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 13:18:42] 2026-03-20 17:17:36,729 | INFO     | **************************************
[2026-03-20 13:18:42] 2026-03-20 17:17:36,729 | INFO     | 
[2026-03-20 13:18:42] 2026-03-20 17:17:36,751 | INFO     | architecture information:
[2026-03-20 13:18:42] 2026-03-20 17:17:36,751 | INFO     | executing command: cat /etc/os-release
[2026-03-20 13:18:42] 2026-03-20 17:17:36,763 | INFO     | cat /etc/os-release:
[2026-03-20 13:18:42] NAME="CentOS Linux"
[2026-03-20 13:18:42] VERSION="7 (Core)"
[2026-03-20 13:18:42] ID="centos"
[2026-03-20 13:18:42] ID_LIKE="rhel fedora"
[2026-03-20 13:18:42] VERSION_ID="7"
[2026-03-20 13:18:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 13:18:42] ANSI_COLOR="0;31"
[2026-03-20 13:18:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 13:18:42] HOME_URL="https://www.centos.org/"
[2026-03-20 13:18:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 13:18:42] 
[2026-03-20 13:18:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 13:18:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 13:18:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 13:18:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 13:18:42] 
[2026-03-20 13:18:42] 2026-03-20 17:17:36,763 | INFO     | **************************************
[2026-03-20 13:18:42] 2026-03-20 17:17:37,267 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-20 13:18:42] 2026-03-20 17:17:37,282 | INFO     | sufficient remaining disk space (400532963328 B)
[2026-03-20 13:18:42] 2026-03-20 17:17:37,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 13:18:42] 2026-03-20 17:17:37,282 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 13:18:42] 2026-03-20 17:17:37,282 | INFO     | update_server=False
[2026-03-20 13:18:42] 2026-03-20 17:17:37,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 13:18:42] 2026-03-20 17:17:37,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 13:18:42] 2026-03-20 17:17:37,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 13:18:42] 2026-03-20 17:17:37,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 13:18:42] 2026-03-20 17:17:37,283 | INFO     | will abort loop
[2026-03-20 13:18:42] 2026-03-20 17:17:37,504 | INFO     | all data control threads have been joined
[2026-03-20 13:18:42] 2026-03-20 17:17:38,288 | INFO     | [job] retrieve thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:38,288 | INFO     | [job] queue monitor thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:38,289 | INFO     | [job] job monitor thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:38,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 13:18:42] 2026-03-20 17:17:38,510 | INFO     | [data] control thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:38,635 | INFO     | all payload control threads have been joined
[2026-03-20 13:18:42] 2026-03-20 17:17:38,958 | INFO     | all job control threads have been joined
[2026-03-20 13:18:42] 2026-03-20 17:17:39,096 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,138 | INFO     | [payload] failed_post thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,176 | INFO     | [job] validate thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,502 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,634 | INFO     | [payload] validate_post thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,641 | INFO     | [payload] control thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,727 | INFO     | [data] copytool_in thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,781 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:39,964 | INFO     | [job] control thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:40,374 | INFO     | [data] copytool_out thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:41,290 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:17:47,941 | INFO     | job.realtimelogging is not enabled
[2026-03-20 13:18:42] 2026-03-20 17:17:48,947 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 13:18:42] 2026-03-20 17:18:06,901 | INFO     | PID=3658331 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 13:18:42] 2026-03-20 17:18:06,901 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 13:18:42] 2026-03-20 17:18:06,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 13:18:42] 2026-03-20 17:18:06,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 13:18:42] 2026-03-20 17:18:36,949 | INFO     | [monitor] cgroup control has ended
[2026-03-20 13:18:42] 2026-03-20 17:18:37,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321230776128)>', '<ExcThread(monitor, started 140320675198720)>']
[2026-03-20 13:18:42] 2026-03-20 17:18:38,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 13:18:42] 2026-03-20 17:18:38,067 | INFO     | [monitor] control thread has ended
[2026-03-20 13:18:42] 2026-03-20 17:18:42,775 | INFO     | all workflow threads have been joined
[2026-03-20 13:18:42] 2026-03-20 17:18:42,775 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 13:18:42] 2026-03-20 17:18:42,775 | INFO     | traces error code: 0
[2026-03-20 13:18:42] 2026-03-20 17:18:42,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 13:18:42] 2026-03-20 17:18:42,833 [wrapper] ==== pilot stdout END ====
[2026-03-20 13:18:42] 2026-03-20 17:18:42,836 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 13:18:42] 2026-03-20 17:18:42,839 [wrapper] pilotpid: 3658331
[2026-03-20 13:18:42] 2026-03-20 17:18:42,842 [wrapper] Pilot exit status: 0
[2026-03-20 13:18:42] 2026-03-20 17:18:42,852 [wrapper] pandaids: 7056944987
[2026-03-20 13:18:42] 2026-03-20 17:18:42,881 [wrapper] cleanup supervisor_pilot 3736499 3658332
[2026-03-20 13:18:42] 2026-03-20 17:18:42,884 [wrapper] Test setup, not cleaning
[2026-03-20 13:18:42] 2026-03-20 17:18:42,886 [wrapper] apfmon messages muted
[2026-03-20 13:18:42] 2026-03-20 17:18:42,889 [wrapper] ==== wrapper stdout END ====
[2026-03-20 13:18:42] 2026-03-20 17:18:42,891 [wrapper] ==== wrapper stderr END ====
[2026-03-20 13:18:42]  *** Error codes and diagnostics ***
[2026-03-20 13:18:42]     "exeErrorCode": 0,
[2026-03-20 13:18:42]     "exeErrorDiag": "",
[2026-03-20 13:18:42]     "pilotErrorCode": 0,
[2026-03-20 13:18:42]     "pilotErrorDiag": "",
[2026-03-20 13:18:42]  *** Listing of results directory ***
[2026-03-20 13:18:42] total 500140
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc    585013 Mar 16 11:03 pilot3.tar.gz
[2026-03-20 13:18:42] -rwx------ 1 boinc boinc     36322 Mar 16 11:04 runpilot2-wrapper.sh
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc      5111 Mar 16 11:04 queuedata.json
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc       100 Mar 20 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 13:18:42] -rwxr-xr-x 1 boinc boinc      7986 Mar 20 08:43 run_atlas
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc       105 Mar 20 08:43 job.xml
[2026-03-20 13:18:42] -rw-r--r-- 2 boinc boinc     15845 Mar 20 08:43 start_atlas.sh
[2026-03-20 13:18:42] drwxrwx--x 2 boinc boinc      4096 Mar 20 08:43 shared
[2026-03-20 13:18:42] -rw-r--r-- 2 boinc boinc    597545 Mar 20 08:43 input.tar.gz
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc      9156 Mar 20 08:43 init_data.xml
[2026-03-20 13:18:42] -rw-r--r-- 2 boinc boinc 247769197 Mar 20 08:43 EVNT.49129889._000023.pool.root.1
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc         0 Mar 20 08:43 boinc_setup_complete
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc         0 Mar 20 08:43 boinc_lockfile
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc      2661 Mar 20 08:43 pandaJob.out
[2026-03-20 13:18:42] -rw------- 1 boinc boinc   1008614 Mar 20 08:44 agis_schedconf.cvmfs.json
[2026-03-20 13:18:42] -rw------- 1 boinc boinc       419 Mar 20 08:44 workernode_map.json
[2026-03-20 13:18:42] drwx------ 5 boinc boinc      4096 Mar 20 08:44 pilot3
[2026-03-20 13:18:42] -rw------- 1 boinc boinc 254867029 Mar 20 13:17 HITS.49178853._000561.pool.root.1
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc       530 Mar 20 13:17 boinc_task_state.xml
[2026-03-20 13:18:42] -rw------- 1 boinc boinc        95 Mar 20 13:17 pilot_heartbeat.json
[2026-03-20 13:18:42] -rw------- 1 boinc boinc      1036 Mar 20 13:17 memory_monitor_summary.json
[2026-03-20 13:18:42] -rw------- 1 boinc boinc   1511579 Mar 20 13:17 agis_ddmendpoints.agis.ALL.json
[2026-03-20 13:18:42] -rw------- 1 boinc boinc    432039 Mar 20 13:17 log.49178853._000561.job.log.tgz.1
[2026-03-20 13:18:42] -rw------- 1 boinc boinc      6284 Mar 20 13:17 heartbeat.json
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc      8192 Mar 20 13:18 boinc_mmap_file
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc        28 Mar 20 13:18 wrapper_checkpoint.txt
[2026-03-20 13:18:42] -rw------- 1 boinc boinc      4826 Mar 20 13:18 pilotlog.txt
[2026-03-20 13:18:42] -rw------- 1 boinc boinc   2350162 Mar 20 13:18 log.49178853._000561.job.log.1
[2026-03-20 13:18:42] -rw------- 1 boinc boinc       357 Mar 20 13:18 output.list
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc       620 Mar 20 13:18 runtime_log
[2026-03-20 13:18:42] -rw------- 1 boinc boinc   2795520 Mar 20 13:18 result.tar.gz
[2026-03-20 13:18:42] -rw------- 1 boinc boinc       648 Mar 20 13:18 tjkMDmvfOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmSuLDmjhu2Rm.diag
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc      8892 Mar 20 13:18 runtime_log.err
[2026-03-20 13:18:42] -rw-r--r-- 1 boinc boinc     21347 Mar 20 13:18 stderr.txt
[2026-03-20 13:18:42] HITS file was successfully produced:
[2026-03-20 13:18:42] -rw------- 1 boinc boinc 254867029 Mar 20 13:17 shared/HITS.pool.root.1
[2026-03-20 13:18:42]  *** Contents of shared directory: ***
[2026-03-20 13:18:42] total 494200
[2026-03-20 13:18:42] -rw-r--r-- 2 boinc boinc     15845 Mar 20 08:43 start_atlas.sh
[2026-03-20 13:18:42] -rw-r--r-- 2 boinc boinc    597545 Mar 20 08:43 input.tar.gz
[2026-03-20 13:18:42] -rw-r--r-- 2 boinc boinc 247769197 Mar 20 08:43 ATLAS.root_0
[2026-03-20 13:18:42] -rw------- 1 boinc boinc 254867029 Mar 20 13:17 HITS.pool.root.1
[2026-03-20 13:18:42] -rw------- 1 boinc boinc   2795520 Mar 20 13:18 result.tar.gz
13:18:44 (3649692): run_atlas exited; CPU time 64931.996545
13:18:44 (3649692): called boinc_finish(0)

</stderr_txt>
]]>

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