Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:47:34 (3316206): wrapper (7.7.26015): starting
05:47:34 (3316206): wrapper: running run_atlas (--nthreads 8)
[2026-03-20 05:47:34] Arguments: --nthreads 8
[2026-03-20 05:47:34] Threads: 8
[2026-03-20 05:47:34] Checking for CVMFS
[2026-03-20 05:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 05:47:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 05:47:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 05:47:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 05:47:37] 2.13.3.0 11048 194049 380832 157495 2 147 31056179 32935936 25186 16776704 0 435047202 99.443 656390165 38276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-20 05:47:37] CVMFS is ok
[2026-03-20 05:47:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 05:47:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 05:47:37] Further information can be found at the LHC@home message board.
[2026-03-20 05:47:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 05:47:37] Checking for apptainer binary...
[2026-03-20 05:47:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 05:47:37] Running /usr/bin/apptainer --version
[2026-03-20 05:47:38] apptainer version 1.4.5-2.el9
[2026-03-20 05:47:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 05:47:39] c6-1-24-2.aglt2.org
[2026-03-20 05:47:39] apptainer works
[2026-03-20 05:47:40] Set ATHENA_PROC_NUMBER=8
[2026-03-20 05:47:40] Set ATHENA_CORE_NUMBER=8
[2026-03-20 05:47:40] Starting ATLAS job with PandaID=7054501666
[2026-03-20 05:47:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 12:31:35]  *** The last 200 lines of the pilot log: ***
[2026-03-20 12:31:35] 2026-03-20 16:30:45,956 | INFO     | job 7054501666 has finished - writing final server update
[2026-03-20 12:31:35] 2026-03-20 16:30:45,957 | INFO     | total number of processed events: 400 (read)
[2026-03-20 12:31:35] 2026-03-20 16:30:45,968 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7054501666/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 12:31:35] 2026-03-20 16:30:45,968 | INFO     | extracted standard info from prmon json
[2026-03-20 12:31:35] 2026-03-20 16:30:45,969 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 12:31:35] 2026-03-20 16:30:45,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 12:31:35] 2026-03-20 16:30:45,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 12:31:35] 2026-03-20 16:30:45,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 12:31:35] 2026-03-20 16:30:45,978 | INFO     | fitting pss+swap vs Time
[2026-03-20 12:31:35] 2026-03-20 16:30:45,978 | INFO     | sum of square deviations: 18821038829.852493
[2026-03-20 12:31:35] 2026-03-20 16:30:45,984 | INFO     | sum of deviations: 194667500326.45798
[2026-03-20 12:31:35] 2026-03-20 16:30:45,984 | INFO     | mean x: 1774012278.5318067
[2026-03-20 12:31:35] 2026-03-20 16:30:45,984 | INFO     | mean y: 2463790.763358779
[2026-03-20 12:31:35] 2026-03-20 16:30:45,984 | INFO     | intersect: -18346286186.972992
[2026-03-20 12:31:35] 2026-03-20 16:30:45,985 | INFO     | chi2: 4.745431197560666
[2026-03-20 12:31:35] 2026-03-20 16:30:45,986 | INFO     | sum of square deviations: 18111824158.420113
[2026-03-20 12:31:35] 2026-03-20 16:30:45,990 | INFO     | sum of deviations: 217787476465.95874
[2026-03-20 12:31:35] 2026-03-20 16:30:45,990 | INFO     | mean x: 1774012126.0386598
[2026-03-20 12:31:35] 2026-03-20 16:30:45,990 | INFO     | mean y: 2468704.536082474
[2026-03-20 12:31:35] 2026-03-20 16:30:45,990 | INFO     | intersect: -21329321002.043747
[2026-03-20 12:31:35] 2026-03-20 16:30:45,991 | INFO     | chi2: 4.001039891659344
[2026-03-20 12:31:35] 2026-03-20 16:30:45,991 | INFO     | current chi2=4.001039891659344 (change=15.686484007690748 %)
[2026-03-20 12:31:35] 2026-03-20 16:30:45,991 | INFO     | right removable region: 387
[2026-03-20 12:31:35] 2026-03-20 16:30:45,992 | INFO     | sum of square deviations: 18111720519.494873
[2026-03-20 12:31:35] 2026-03-20 16:30:45,996 | INFO     | sum of deviations: 77925862632.9279
[2026-03-20 12:31:35] 2026-03-20 16:30:45,997 | INFO     | mean x: 1774012431.0360825
[2026-03-20 12:31:35] 2026-03-20 16:30:45,997 | INFO     | mean y: 2488852.005154639
[2026-03-20 12:31:35] 2026-03-20 16:30:45,997 | INFO     | intersect: -7630217762.544557
[2026-03-20 12:31:35] 2026-03-20 16:30:45,997 | INFO     | chi2: 1.3800736257227104
[2026-03-20 12:31:35] 2026-03-20 16:30:45,998 | INFO     | current chi2=1.3800736257227104 (change=70.91784564420361 %)
[2026-03-20 12:31:35] 2026-03-20 16:30:45,998 | INFO     | sum of square deviations: 17420472971.200844
[2026-03-20 12:31:35] 2026-03-20 16:30:46,001 | INFO     | sum of deviations: 40972802015.26629
[2026-03-20 12:31:35] 2026-03-20 16:30:46,001 | INFO     | mean x: 1774012583.537859
[2026-03-20 12:31:35] 2026-03-20 16:30:46,001 | INFO     | mean y: 2496971.1540469974
[2026-03-20 12:31:35] 2026-03-20 16:30:46,002 | INFO     | intersect: -4169965308.0304003
[2026-03-20 12:31:35] 2026-03-20 16:30:46,002 | INFO     | chi2: 0.9744743695482053
[2026-03-20 12:31:35] 2026-03-20 16:30:46,002 | INFO     | current chi2=0.9744743695482053 (change=29.389682449883992 %)
[2026-03-20 12:31:35] 2026-03-20 16:30:46,003 | INFO     | sum of square deviations: 16747086070.552906
[2026-03-20 12:31:35] 2026-03-20 16:30:46,006 | INFO     | sum of deviations: 17000948336.30951
[2026-03-20 12:31:35] 2026-03-20 16:30:46,006 | INFO     | mean x: 1774012736.0343916
[2026-03-20 12:31:35] 2026-03-20 16:30:46,006 | INFO     | mean y: 2502384.976190476
[2026-03-20 12:31:35] 2026-03-20 16:30:46,006 | INFO     | intersect: -1798401888.532451
[2026-03-20 12:31:35] 2026-03-20 16:30:46,007 | INFO     | chi2: 0.8328277147485571
[2026-03-20 12:31:35] 2026-03-20 16:30:46,007 | INFO     | current chi2=0.8328277147485571 (change=14.535698344259146 %)
[2026-03-20 12:31:35] 2026-03-20 16:30:46,007 | INFO     | left removable region: 30
[2026-03-20 12:31:35] 2026-03-20 16:30:46,007 | INFO     | sum of square deviations: 14108133554.739435
[2026-03-20 12:31:35] 2026-03-20 16:30:46,010 | INFO     | sum of deviations: 27663425568.201668
[2026-03-20 12:31:35] 2026-03-20 16:30:46,010 | INFO     | mean x: 1774013010.537815
[2026-03-20 12:31:35] 2026-03-20 16:30:46,010 | INFO     | mean y: 2511216.2072829134
[2026-03-20 12:31:35] 2026-03-20 16:30:46,010 | INFO     | intersect: -3475998303.3987346
[2026-03-20 12:31:35] 2026-03-20 16:30:46,011 | INFO     | chi2: 0.0056773536421417655
[2026-03-20 12:31:35] 2026-03-20 16:30:46,011 | INFO     | current memory leak: 1.96 B/s (using 357 data points, chi2=0.01)
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | could have reported an average CPU frequency of 2940 MHz (17 samples)
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | ..............................
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . Timing measurements:
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . get job = 1 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . initial setup = 46 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . payload setup = 91 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . stage-in = 0 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . payload execution = 23951 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . stage-out = 3 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | . log creation = 0 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,012 | INFO     | ..............................
[2026-03-20 12:31:35] 2026-03-20 16:30:46,108 | INFO     | 
[2026-03-20 12:31:35] 2026-03-20 16:30:46,108 | INFO     | job summary report
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | --------------------------------------------------
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | PanDA job id: 7054501666
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | task id: 48967085
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | errors: (none)
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | pilot state: finished 
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | transexitcode: 0
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | exeerrorcode: 0
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | exeerrordiag: 
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | exitcode: 0
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | exitmsg: OK
[2026-03-20 12:31:35] 2026-03-20 16:30:46,109 | INFO     | cpuconsumptiontime: 48913 s
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | nevents: 400
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | neventsw: 0
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | pid: 3337567
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | pgrp: 3337567
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | corecount: 8
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | event service: False
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | sizes: {0: 2279753, 1: 2279809, 2: 2279865, 3: 2279865, 5: 2280354, 24046: 2315410, 24050: 2324408, 24052: 2324722}
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | --------------------------------------------------
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | 
[2026-03-20 12:31:35] 2026-03-20 16:30:46,110 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-20 12:31:35] 2026-03-20 16:30:46,151 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,152 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,152 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,152 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 12:31:35] 2026-03-20 16:30:46,158 | INFO     | job 7054501666 has completed (purged errors)
[2026-03-20 12:31:35] 2026-03-20 16:30:46,159 | INFO     | overall cleanup function is called
[2026-03-20 12:31:35] 2026-03-20 16:30:47,198 | INFO     | --- collectZombieJob: --- 10, [3337567]
[2026-03-20 12:31:35] 2026-03-20 16:30:47,198 | INFO     | zombie collector waiting for pid 3337567
[2026-03-20 12:31:35] 2026-03-20 16:30:47,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 12:31:35] 2026-03-20 16:30:47,199 | INFO     | collected zombie processes
[2026-03-20 12:31:35] 2026-03-20 16:30:47,199 | INFO     | will attempt to kill all subprocesses of pid=3337567
[2026-03-20 12:31:35] 2026-03-20 16:30:47,964 | INFO     | process IDs to be killed: [3337567] (in reverse order)
[2026-03-20 12:31:35] 2026-03-20 16:30:48,119 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 12:31:35] 2026-03-20 16:30:48,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 12:31:35] 2026-03-20 16:30:48,136 | INFO     | did not find any defunct processes belonging to 3337567
[2026-03-20 12:31:35] 2026-03-20 16:30:48,153 | INFO     | did not find any defunct processes belonging to 3337567
[2026-03-20 12:31:35] 2026-03-20 16:30:48,154 | INFO     | ready for new job
[2026-03-20 12:31:35] 2026-03-20 16:30:48,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 12:31:35] 2026-03-20 16:30:48,156 | INFO     | **************************************
[2026-03-20 12:31:35] 2026-03-20 16:30:48,156 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 12:31:35] 2026-03-20 16:30:48,156 | INFO     | **************************************
[2026-03-20 12:31:35] 2026-03-20 16:30:48,156 | INFO     | 
[2026-03-20 12:31:35] 2026-03-20 16:30:48,159 | INFO     | architecture information:
[2026-03-20 12:31:35] 2026-03-20 16:30:48,160 | INFO     | executing command: cat /etc/os-release
[2026-03-20 12:31:35] 2026-03-20 16:30:48,178 | INFO     | cat /etc/os-release:
[2026-03-20 12:31:35] NAME="CentOS Linux"
[2026-03-20 12:31:35] VERSION="7 (Core)"
[2026-03-20 12:31:35] ID="centos"
[2026-03-20 12:31:35] ID_LIKE="rhel fedora"
[2026-03-20 12:31:35] VERSION_ID="7"
[2026-03-20 12:31:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 12:31:35] ANSI_COLOR="0;31"
[2026-03-20 12:31:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 12:31:35] HOME_URL="https://www.centos.org/"
[2026-03-20 12:31:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 12:31:35] 
[2026-03-20 12:31:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 12:31:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 12:31:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 12:31:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 12:31:35] 
[2026-03-20 12:31:35] 2026-03-20 16:30:48,178 | INFO     | **************************************
[2026-03-20 12:31:35] 2026-03-20 16:30:48,681 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-20 12:31:35] 2026-03-20 16:30:48,716 | INFO     | sufficient remaining disk space (75736547328 B)
[2026-03-20 12:31:35] 2026-03-20 16:30:48,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 12:31:35] 2026-03-20 16:30:48,716 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 12:31:35] 2026-03-20 16:30:48,716 | INFO     | update_server=False
[2026-03-20 12:31:35] 2026-03-20 16:30:48,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 12:31:35] 2026-03-20 16:30:48,829 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-20 12:31:35] 2026-03-20 16:30:48,829 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-20 12:31:35] 2026-03-20 16:30:48,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 12:31:35] 2026-03-20 16:30:48,830 | INFO     | will abort loop
[2026-03-20 12:31:35] 2026-03-20 16:30:49,275 | INFO     | all data control threads have been joined
[2026-03-20 12:31:35] 2026-03-20 16:30:49,722 | INFO     | [job] retrieve thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:49,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 12:31:35] 2026-03-20 16:30:49,778 | INFO     | all job control threads have been joined
[2026-03-20 12:31:35] 2026-03-20 16:30:49,836 | INFO     | [job] job monitor thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:49,962 | INFO     | all payload control threads have been joined
[2026-03-20 12:31:35] 2026-03-20 16:30:50,043 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,280 | INFO     | [data] control thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,313 | INFO     | [payload] failed_post thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,383 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,480 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,535 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,784 | INFO     | [job] control thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,850 | INFO     | [data] copytool_in thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,854 | INFO     | [job] validate thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:50,974 | INFO     | [payload] control thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:51,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 12:31:35] 2026-03-20 16:30:51,207 | INFO     | [payload] validate_post thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:51,780 | INFO     | [data] copytool_out thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:51,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 12:31:35] 2026-03-20 16:30:52,148 | INFO     | [job] queue monitor thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:30:55,978 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 12:31:35] 2026-03-20 16:31:19,754 | INFO     | PID=3327444 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 12:31:35] 2026-03-20 16:31:19,757 | INFO     | .. there are 44 such processes running
[2026-03-20 12:31:35] 2026-03-20 16:31:19,759 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 12:31:35] 2026-03-20 16:31:19,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 12:31:35] 2026-03-20 16:31:19,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 12:31:35] 2026-03-20 16:31:29,366 | INFO     | [monitor] cgroup control has ended
[2026-03-20 12:31:35] 2026-03-20 16:31:30,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725821949760)>', '<ExcThread(monitor, started 139724815595264)>']
[2026-03-20 12:31:35] 2026-03-20 16:31:30,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 12:31:35] 2026-03-20 16:31:30,825 | INFO     | [monitor] control thread has ended
[2026-03-20 12:31:35] 2026-03-20 16:31:35,345 | INFO     | all workflow threads have been joined
[2026-03-20 12:31:35] 2026-03-20 16:31:35,345 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 12:31:35] 2026-03-20 16:31:35,346 | INFO     | traces error code: 0
[2026-03-20 12:31:35] 2026-03-20 16:31:35,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 12:31:35] 2026-03-20 16:31:35,591 [wrapper] ==== pilot stdout END ====
[2026-03-20 12:31:35] 2026-03-20 16:31:35,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 12:31:35] 2026-03-20 16:31:35,598 [wrapper] pilotpid: 3327444
[2026-03-20 12:31:35] 2026-03-20 16:31:35,601 [wrapper] Pilot exit status: 0
[2026-03-20 12:31:35] 2026-03-20 16:31:35,669 [wrapper] pandaids: 7054501666
[2026-03-20 12:31:35] 2026-03-20 16:31:35,765 [wrapper] cleanup supervisor_pilot  707155 3327445
[2026-03-20 12:31:35] 2026-03-20 16:31:35,769 [wrapper] Test setup, not cleaning
[2026-03-20 12:31:35] 2026-03-20 16:31:35,771 [wrapper] apfmon messages muted
[2026-03-20 12:31:35] 2026-03-20 16:31:35,774 [wrapper] ==== wrapper stdout END ====
[2026-03-20 12:31:35] 2026-03-20 16:31:35,777 [wrapper] ==== wrapper stderr END ====
[2026-03-20 12:31:35]  *** Error codes and diagnostics ***
[2026-03-20 12:31:35]     "exeErrorCode": 0,
[2026-03-20 12:31:35]     "exeErrorDiag": "",
[2026-03-20 12:31:35]     "pilotErrorCode": 0,
[2026-03-20 12:31:35]     "pilotErrorDiag": "",
[2026-03-20 12:31:35]  *** Listing of results directory ***
[2026-03-20 12:31:35] total 406512
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas    585013 Mar 14 04:35 pilot3.tar.gz
[2026-03-20 12:31:35] -rwx------. 1 boincer umatlas     36322 Mar 14 04:37 runpilot2-wrapper.sh
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas      5111 Mar 14 04:37 queuedata.json
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas       100 Mar 20 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 12:31:35] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 20 05:47 run_atlas
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas       105 Mar 20 05:47 job.xml
[2026-03-20 12:31:35] -rw-r--r--. 2 boincer umatlas 211773395 Mar 20 05:47 EVNT.48967083._000690.pool.root.1
[2026-03-20 12:31:35] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 05:47 start_atlas.sh
[2026-03-20 12:31:35] drwxrwx--x. 2 boincer umatlas      4096 Mar 20 05:47 shared
[2026-03-20 12:31:35] -rw-r--r--. 2 boincer umatlas    597525 Mar 20 05:47 input.tar.gz
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas         0 Mar 20 05:47 boinc_lockfile
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas      2563 Mar 20 05:47 pandaJob.out
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas        57 Mar 20 05:47 setup.sh.local
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas   1010749 Mar 20 05:49 agis_schedconf.cvmfs.json
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas       442 Mar 20 05:49 workernode_map.json
[2026-03-20 12:31:35] drwx------. 5 boincer umatlas      4096 Mar 20 05:49 pilot3
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas       530 Mar 20 12:30 boinc_task_state.xml
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas 193868890 Mar 20 12:30 HITS.48967085._023158.pool.root.1
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas      1054 Mar 20 12:30 memory_monitor_summary.json
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas   1511579 Mar 20 12:30 agis_ddmendpoints.agis.ALL.json
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas    555937 Mar 20 12:30 log.48967085._023158.job.log.tgz.1
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas      6843 Mar 20 12:30 init_data.xml
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas      6391 Mar 20 12:30 heartbeat.json
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas        95 Mar 20 12:31 pilot_heartbeat.json
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas      8192 Mar 20 12:31 boinc_mmap_file
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas        28 Mar 20 12:31 wrapper_checkpoint.txt
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas      5006 Mar 20 12:31 pilotlog.txt
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas   2783775 Mar 20 12:31 log.48967085._023158.job.log.1
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas       357 Mar 20 12:31 output.list
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas       620 Mar 20 12:31 runtime_log
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas   3358720 Mar 20 12:31 result.tar.gz
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas      9347 Mar 20 12:31 runtime_log.err
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas       659 Mar 20 12:31 kH6LDm0fZL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKWpLDmkH6Udm.diag
[2026-03-20 12:31:35] -rw-r--r--. 1 boincer umatlas     21162 Mar 20 12:31 stderr.txt
[2026-03-20 12:31:35] HITS file was successfully produced:
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas 193868890 Mar 20 12:30 shared/HITS.pool.root.1
[2026-03-20 12:31:35]  *** Contents of shared directory: ***
[2026-03-20 12:31:35] total 400028
[2026-03-20 12:31:35] -rw-r--r--. 2 boincer umatlas 211773395 Mar 20 05:47 ATLAS.root_0
[2026-03-20 12:31:35] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 05:47 start_atlas.sh
[2026-03-20 12:31:35] -rw-r--r--. 2 boincer umatlas    597525 Mar 20 05:47 input.tar.gz
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas 193868890 Mar 20 12:30 HITS.pool.root.1
[2026-03-20 12:31:35] -rw-------. 1 boincer umatlas   3358720 Mar 20 12:31 result.tar.gz
12:31:37 (3316206): run_atlas exited; CPU time 49912.982827
12:31:37 (3316206): called boinc_finish(0)

</stderr_txt>
]]>

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