Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:23:21 (2644): wrapper (7.7.26015): starting
05:23:21 (2644): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 05:23:21] Arguments: --nthreads 12
[2026-03-20 05:23:21] Threads: 12
[2026-03-20 05:23:21] Checking for CVMFS
[2026-03-20 05:23:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 05:23:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 05:23:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 05:23:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 05:23:21] 2.11.2.0 2910 202876 105524 157493 2 1 15840571 20275201 1 130560 0 72954096 99.965 8186426 28850 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-20 05:23:21] CVMFS is ok
[2026-03-20 05:23:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 05:23:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 05:23:21] Further information can be found at the LHC@home message board.
[2026-03-20 05:23:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 05:23:21] Checking for apptainer binary...
[2026-03-20 05:23:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 05:23:21] Running /usr/bin/apptainer --version
[2026-03-20 05:23:21] apptainer version 1.3.2-1.el7
[2026-03-20 05:23:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 05:23:23] c-205-11.aglt2.org
[2026-03-20 05:23:23] apptainer works
[2026-03-20 05:23:23] Set ATHENA_PROC_NUMBER=12
[2026-03-20 05:23:23] Set ATHENA_CORE_NUMBER=12
[2026-03-20 05:23:23] Starting ATLAS job with PandaID=7051173955
[2026-03-20 05:23:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 07:46:05]  *** The last 200 lines of the pilot log: ***
[2026-03-20 07:46:06] 2026-03-20 11:45:35,527 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,528 | INFO     | log transfer has been attempted: DONE
[2026-03-20 07:46:06] 2026-03-20 11:45:35,528 | INFO     | job 7051173955 has finished - writing final server update
[2026-03-20 07:46:06] 2026-03-20 11:45:35,528 | INFO     | total number of processed events: 400 (read)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,530 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7051173955/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,530 | INFO     | extracted standard info from prmon json
[2026-03-20 07:46:06] 2026-03-20 11:45:35,530 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 07:46:06] 2026-03-20 11:45:35,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 07:46:06] 2026-03-20 11:45:35,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 07:46:06] 2026-03-20 11:45:35,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 07:46:06] 2026-03-20 11:45:35,533 | INFO     | fitting pss+swap vs Time
[2026-03-20 07:46:06] 2026-03-20 11:45:35,533 | INFO     | sum of square deviations: 832722590.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,534 | INFO     | sum of deviations: 29184259889.999996
[2026-03-20 07:46:06] 2026-03-20 11:45:35,534 | INFO     | mean x: 1774002866.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,534 | INFO     | mean y: 2666771.2661870504
[2026-03-20 07:46:06] 2026-03-20 11:45:35,534 | INFO     | intersect: -62170452234.60687
[2026-03-20 07:46:06] 2026-03-20 11:45:35,534 | INFO     | chi2: 1.6310844361580201
[2026-03-20 07:46:06] 2026-03-20 11:45:35,535 | INFO     | sum of square deviations: 746051197.5
[2026-03-20 07:46:06] 2026-03-20 11:45:35,535 | INFO     | sum of deviations: 28013327619.000008
[2026-03-20 07:46:06] 2026-03-20 11:45:35,535 | INFO     | mean x: 1774002713.5
[2026-03-20 07:46:06] 2026-03-20 11:45:35,536 | INFO     | mean y: 2664710.104477612
[2026-03-20 07:46:06] 2026-03-20 11:45:35,536 | INFO     | intersect: -66609009363.73884
[2026-03-20 07:46:06] 2026-03-20 11:45:35,536 | INFO     | chi2: 1.632120105001669
[2026-03-20 07:46:06] 2026-03-20 11:45:35,536 | INFO     | current chi2=1.632120105001669 (change=-0.06349572227470332 %)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,536 | INFO     | right removable region: 133
[2026-03-20 07:46:06] 2026-03-20 11:45:35,536 | INFO     | sum of square deviations: 746051197.5
[2026-03-20 07:46:06] 2026-03-20 11:45:35,537 | INFO     | sum of deviations: 2494767630.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,537 | INFO     | mean x: 1774003018.5
[2026-03-20 07:46:06] 2026-03-20 11:45:35,537 | INFO     | mean y: 2713192.7164179105
[2026-03-20 07:46:06] 2026-03-20 11:45:35,537 | INFO     | intersect: -5929487333.074027
[2026-03-20 07:46:06] 2026-03-20 11:45:35,538 | INFO     | chi2: 0.03959008618182224
[2026-03-20 07:46:06] 2026-03-20 11:45:35,538 | INFO     | current chi2=0.03959008618182224 (change=97.5727751853806 %)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,538 | INFO     | sum of square deviations: 665612480.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,538 | INFO     | sum of deviations: -144293792.00000018
[2026-03-20 07:46:06] 2026-03-20 11:45:35,539 | INFO     | mean x: 1774003171.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,539 | INFO     | mean y: 2718073.3178294576
[2026-03-20 07:46:06] 2026-03-20 11:45:35,539 | INFO     | intersect: 387292660.2661011
[2026-03-20 07:46:06] 2026-03-20 11:45:35,539 | INFO     | chi2: 0.00363286294361091
[2026-03-20 07:46:06] 2026-03-20 11:45:35,539 | INFO     | current chi2=0.00363286294361091 (change=90.82380642738045 %)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,539 | INFO     | sum of square deviations: 591173875.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,540 | INFO     | sum of deviations: 369270575.99999964
[2026-03-20 07:46:06] 2026-03-20 11:45:35,540 | INFO     | mean x: 1774003323.5
[2026-03-20 07:46:06] 2026-03-20 11:45:35,540 | INFO     | mean y: 2717014.064516129
[2026-03-20 07:46:06] 2026-03-20 11:45:35,540 | INFO     | intersect: -1105395601.8638496
[2026-03-20 07:46:06] 2026-03-20 11:45:35,541 | INFO     | chi2: 0.003072373554455674
[2026-03-20 07:46:06] 2026-03-20 11:45:35,541 | INFO     | current chi2=0.003072373554455674 (change=15.428310890202034 %)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,541 | INFO     | left removable region: 30
[2026-03-20 07:46:06] 2026-03-20 11:45:35,541 | INFO     | sum of square deviations: 338804492.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,541 | INFO     | sum of deviations: 1050521870.0000001
[2026-03-20 07:46:06] 2026-03-20 11:45:35,542 | INFO     | mean x: 1774003598.0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,542 | INFO     | mean y: 2714883.669902913
[2026-03-20 07:46:06] 2026-03-20 11:45:35,542 | INFO     | intersect: -5497889804.764064
[2026-03-20 07:46:06] 2026-03-20 11:45:35,542 | INFO     | chi2: 6.077773013258025e-05
[2026-03-20 07:46:06] 2026-03-20 11:45:35,542 | INFO     | current memory leak: 3.10 B/s (using 103 data points, chi2=0.00)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,542 | INFO     | could have reported an average CPU frequency of 1684 MHz (8 samples)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | ..............................
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . Timing measurements:
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . get job = 0 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . initial setup = 7 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . payload setup = 14 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . stage-in = 0 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . payload execution = 8477 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . stage-out = 0 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | . log creation = 0 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,543 | INFO     | ..............................
[2026-03-20 07:46:06] 2026-03-20 11:45:35,566 | INFO     | time since job start (8510s) is within the limit (345600.0s)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,622 | INFO     | 
[2026-03-20 07:46:06] 2026-03-20 11:45:35,622 | INFO     | job summary report
[2026-03-20 07:46:06] 2026-03-20 11:45:35,623 | INFO     | --------------------------------------------------
[2026-03-20 07:46:06] 2026-03-20 11:45:35,623 | INFO     | PanDA job id: 7051173955
[2026-03-20 07:46:06] 2026-03-20 11:45:35,623 | INFO     | task id: 48966968
[2026-03-20 07:46:06] 2026-03-20 11:45:35,623 | INFO     | errors: (none)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,623 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 07:46:06] 2026-03-20 11:45:35,623 | INFO     | pilot state: finished 
[2026-03-20 07:46:06] 2026-03-20 11:45:35,624 | INFO     | transexitcode: 0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,624 | INFO     | exeerrorcode: 0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,624 | INFO     | exeerrordiag: 
[2026-03-20 07:46:06] 2026-03-20 11:45:35,624 | INFO     | exitcode: 0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,624 | INFO     | exitmsg: OK
[2026-03-20 07:46:06] 2026-03-20 11:45:35,624 | INFO     | cpuconsumptiontime: 95041 s
[2026-03-20 07:46:06] 2026-03-20 11:45:35,625 | INFO     | nevents: 400
[2026-03-20 07:46:06] 2026-03-20 11:45:35,625 | INFO     | neventsw: 0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,625 | INFO     | pid: 10829
[2026-03-20 07:46:06] 2026-03-20 11:45:35,625 | INFO     | pgrp: 10829
[2026-03-20 07:46:06] 2026-03-20 11:45:35,625 | INFO     | corecount: 12
[2026-03-20 07:46:06] 2026-03-20 11:45:35,625 | INFO     | event service: False
[2026-03-20 07:46:06] 2026-03-20 11:45:35,626 | INFO     | sizes: {0: 2279743, 1: 2280204, 11: 2280204, 8496: 2308157, 8497: 2317155, 8498: 2317211, 8499: 2317533}
[2026-03-20 07:46:06] 2026-03-20 11:45:35,626 | INFO     | --------------------------------------------------
[2026-03-20 07:46:06] 2026-03-20 11:45:35,626 | INFO     | 
[2026-03-20 07:46:06] 2026-03-20 11:45:35,626 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-20 07:46:06] 2026-03-20 11:45:35,650 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,651 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,651 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,651 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,654 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,654 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 07:46:06] 2026-03-20 11:45:35,654 | INFO     | job 7051173955 has completed (purged errors)
[2026-03-20 07:46:06] 2026-03-20 11:45:35,654 | INFO     | overall cleanup function is called
[2026-03-20 07:46:06] 2026-03-20 11:45:36,662 | INFO     | --- collectZombieJob: --- 10, [10829]
[2026-03-20 07:46:06] 2026-03-20 11:45:36,663 | INFO     | zombie collector waiting for pid 10829
[2026-03-20 07:46:06] 2026-03-20 11:45:36,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 07:46:06] 2026-03-20 11:45:36,663 | INFO     | collected zombie processes
[2026-03-20 07:46:06] 2026-03-20 11:45:36,663 | INFO     | will attempt to kill all subprocesses of pid=10829
[2026-03-20 07:46:06] 2026-03-20 11:45:36,750 | INFO     | process IDs to be killed: [10829] (in reverse order)
[2026-03-20 07:46:06] 2026-03-20 11:45:36,802 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 07:46:06] 2026-03-20 11:45:36,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 07:46:06] 2026-03-20 11:45:36,805 | INFO     | did not find any defunct processes belonging to 10829
[2026-03-20 07:46:06] 2026-03-20 11:45:36,807 | INFO     | did not find any defunct processes belonging to 10829
[2026-03-20 07:46:06] 2026-03-20 11:45:36,808 | INFO     | ready for new job
[2026-03-20 07:46:06] 2026-03-20 11:45:36,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 07:46:06] 2026-03-20 11:45:36,809 | INFO     | **************************************
[2026-03-20 07:46:06] 2026-03-20 11:45:36,809 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 07:46:06] 2026-03-20 11:45:36,809 | INFO     | **************************************
[2026-03-20 07:46:06] 2026-03-20 11:45:36,809 | INFO     | 
[2026-03-20 07:46:06] 2026-03-20 11:45:36,810 | INFO     | architecture information:
[2026-03-20 07:46:06] 2026-03-20 11:45:36,810 | INFO     | executing command: cat /etc/os-release
[2026-03-20 07:46:06] 2026-03-20 11:45:36,825 | INFO     | cat /etc/os-release:
[2026-03-20 07:46:06] NAME="CentOS Linux"
[2026-03-20 07:46:06] VERSION="7 (Core)"
[2026-03-20 07:46:06] ID="centos"
[2026-03-20 07:46:06] ID_LIKE="rhel fedora"
[2026-03-20 07:46:06] VERSION_ID="7"
[2026-03-20 07:46:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 07:46:06] ANSI_COLOR="0;31"
[2026-03-20 07:46:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 07:46:06] HOME_URL="https://www.centos.org/"
[2026-03-20 07:46:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 07:46:06] 
[2026-03-20 07:46:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 07:46:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 07:46:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 07:46:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 07:46:06] 
[2026-03-20 07:46:06] 2026-03-20 11:45:36,825 | INFO     | **************************************
[2026-03-20 07:46:06] 2026-03-20 11:45:37,328 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-20 07:46:06] 2026-03-20 11:45:37,345 | INFO     | sufficient remaining disk space (28339863552 B)
[2026-03-20 07:46:06] 2026-03-20 11:45:37,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 07:46:06] 2026-03-20 11:45:37,346 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 07:46:06] 2026-03-20 11:45:37,346 | INFO     | update_server=False
[2026-03-20 07:46:06] 2026-03-20 11:45:37,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 07:46:06] 2026-03-20 11:45:37,346 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-20 07:46:06] 2026-03-20 11:45:37,347 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 07:46:06] 2026-03-20 11:45:37,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 07:46:06] 2026-03-20 11:45:37,347 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 07:46:06] 2026-03-20 11:45:37,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 07:46:06] 2026-03-20 11:45:37,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 07:46:06] 2026-03-20 11:45:38,007 | INFO     | all data control threads have been joined
[2026-03-20 07:46:06] 2026-03-20 11:45:38,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 07:46:06] 2026-03-20 11:45:38,101 | INFO     | aborting loop
[2026-03-20 07:46:06] 2026-03-20 11:45:38,123 | INFO     | all payload control threads have been joined
[2026-03-20 07:46:06] 2026-03-20 11:45:38,352 | INFO     | [job] retrieve thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:38,352 | INFO     | [job] queue monitor thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:38,365 | INFO     | all job control threads have been joined
[2026-03-20 07:46:06] 2026-03-20 11:45:38,877 | INFO     | [payload] validate_post thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:38,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,009 | INFO     | [data] control thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,107 | INFO     | [job] job monitor thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,128 | INFO     | [payload] control thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,353 | INFO     | [data] copytool_out thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,356 | INFO     | [job] validate thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,371 | INFO     | [job] control thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,527 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,638 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,651 | INFO     | [data] copytool_in thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,825 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:39,948 | INFO     | [payload] failed_post thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:40,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 07:46:06] 2026-03-20 11:45:44,330 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 07:46:06] 2026-03-20 11:45:58,956 | INFO     | [monitor] cgroup control has ended
[2026-03-20 07:46:06] 2026-03-20 11:46:00,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117391861568)>', '<ExcThread(monitor, started 140115993163520)>']
[2026-03-20 07:46:06] 2026-03-20 11:46:01,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 07:46:06] 2026-03-20 11:46:01,463 | INFO     | [monitor] control thread has ended
[2026-03-20 07:46:06] 2026-03-20 11:46:05,679 | INFO     | all workflow threads have been joined
[2026-03-20 07:46:06] 2026-03-20 11:46:05,679 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 07:46:06] 2026-03-20 11:46:05,680 | INFO     | traces error code: 0
[2026-03-20 07:46:06] 2026-03-20 11:46:05,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 07:46:06] 2026-03-20 11:46:05,787 [wrapper] ==== pilot stdout END ====
[2026-03-20 07:46:06] 2026-03-20 11:46:05,791 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 07:46:06] 2026-03-20 11:46:05,795 [wrapper] pilotpid: 6364
[2026-03-20 07:46:06] 2026-03-20 11:46:05,799 [wrapper] Pilot exit status: 0
[2026-03-20 07:46:06] 2026-03-20 11:46:05,814 [wrapper] pandaids: 7051173955
[2026-03-20 07:46:06] 2026-03-20 11:46:05,855 [wrapper] cleanup supervisor_pilot 14871 6365
[2026-03-20 07:46:06] 2026-03-20 11:46:05,859 [wrapper] Test setup, not cleaning
[2026-03-20 07:46:06] 2026-03-20 11:46:05,863 [wrapper] apfmon messages muted
[2026-03-20 07:46:06] 2026-03-20 11:46:05,867 [wrapper] ==== wrapper stdout END ====
[2026-03-20 07:46:06] 2026-03-20 11:46:05,871 [wrapper] ==== wrapper stderr END ====
[2026-03-20 07:46:06]  *** Error codes and diagnostics ***
[2026-03-20 07:46:06]     "exeErrorCode": 0,
[2026-03-20 07:46:06]     "exeErrorDiag": "",
[2026-03-20 07:46:06]     "pilotErrorCode": 0,
[2026-03-20 07:46:06]     "pilotErrorDiag": "",
[2026-03-20 07:46:06]  *** Listing of results directory ***
[2026-03-20 07:46:06] total 490980
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas    585013 Mar 12 00:15 pilot3.tar.gz
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas      5111 Mar 12 00:16 queuedata.json
[2026-03-20 07:46:06] -rwx------ 1 boincer umatlas     36322 Mar 12 00:16 runpilot2-wrapper.sh
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas       100 Mar 20 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 07:46:06] -rwxr-xr-x 1 boincer umatlas      7986 Mar 20 05:23 run_atlas
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas       105 Mar 20 05:23 job.xml
[2026-03-20 07:46:06] -rw-r--r-- 2 boincer umatlas 229792852 Mar 20 05:23 EVNT.48966966._000013.pool.root.1
[2026-03-20 07:46:06] -rw-r--r-- 2 boincer umatlas     15845 Mar 20 05:23 start_atlas.sh
[2026-03-20 07:46:06] drwxrwx--x 2 boincer umatlas      4096 Mar 20 05:23 shared
[2026-03-20 07:46:06] -rw-r--r-- 2 boincer umatlas    597529 Mar 20 05:23 input.tar.gz
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas         0 Mar 20 05:23 boinc_lockfile
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas      2565 Mar 20 05:23 pandaJob.out
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas   1010740 Mar 20 05:23 agis_schedconf.cvmfs.json
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas   1511579 Mar 20 05:23 agis_ddmendpoints.agis.ALL.json
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas       434 Mar 20 05:23 workernode_map.json
[2026-03-20 07:46:06] drwx------ 5 boincer umatlas      4096 Mar 20 05:23 pilot3
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas      5868 Mar 20 07:36 init_data.xml
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas 265786581 Mar 20 07:44 HITS.48966968._000307.pool.root.1
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas       529 Mar 20 07:45 boinc_task_state.xml
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas      1049 Mar 20 07:45 memory_monitor_summary.json
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas    426873 Mar 20 07:45 log.48966968._000307.job.log.tgz.1
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas      6401 Mar 20 07:45 heartbeat.json
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas        95 Mar 20 07:45 pilot_heartbeat.json
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas      8192 Mar 20 07:45 boinc_mmap_file
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas        27 Mar 20 07:45 wrapper_checkpoint.txt
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas      4548 Mar 20 07:46 pilotlog.txt
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas   1196706 Mar 20 07:46 log.48966968._000307.job.log.1
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas       357 Mar 20 07:46 output.list
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas       620 Mar 20 07:46 runtime_log
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas   1638400 Mar 20 07:46 result.tar.gz
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas      8818 Mar 20 07:46 runtime_log.err
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas       662 Mar 20 07:46 hD6KDmUemK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBwlLDmpyv0Mo.diag
[2026-03-20 07:46:06] -rw-r--r-- 1 boincer umatlas     20987 Mar 20 07:46 stderr.txt
[2026-03-20 07:46:06] HITS file was successfully produced:
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas 265786581 Mar 20 07:44 shared/HITS.pool.root.1
[2026-03-20 07:46:06]  *** Contents of shared directory: ***
[2026-03-20 07:46:06] total 486172
[2026-03-20 07:46:06] -rw-r--r-- 2 boincer umatlas 229792852 Mar 20 05:23 ATLAS.root_0
[2026-03-20 07:46:06] -rw-r--r-- 2 boincer umatlas     15845 Mar 20 05:23 start_atlas.sh
[2026-03-20 07:46:06] -rw-r--r-- 2 boincer umatlas    597529 Mar 20 05:23 input.tar.gz
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas 265786581 Mar 20 07:44 HITS.pool.root.1
[2026-03-20 07:46:06] -rw------- 1 boincer umatlas   1638400 Mar 20 07:46 result.tar.gz
07:46:07 (2644): run_atlas exited; CPU time 95019.663727
07:46:07 (2644): called boinc_finish(0)

</stderr_txt>
]]>

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