Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-20 11:02:10 (6700): vboxwrapper version 26210
2026-03-20 11:02:10 (6700): BOINC client version: 7.20.2
2026-03-20 11:02:11 (6700): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-03-20 11:02:11 (6700): Successfully copied 'init_data.xml' to the shared directory.
2026-03-20 11:02:11 (6700): Create VM. (boinc_4a96fdcffcb5f3fd, slot#0)
2026-03-20 11:02:12 (6700): Setting Memory Size for VM. (4400MB)
2026-03-20 11:02:12 (6700): Setting CPU Count for VM. (4)
2026-03-20 11:02:12 (6700): Setting Chipset Options for VM.
2026-03-20 11:02:13 (6700): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-20 11:02:13 (6700): Setting Boot Options for VM.
2026-03-20 11:02:14 (6700): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-20 11:02:14 (6700): Enabling VM Network Access.
2026-03-20 11:02:14 (6700): Disabling USB Support for VM.
2026-03-20 11:02:14 (6700): Disabling COM Port Support for VM.
2026-03-20 11:02:15 (6700): Disabling LPT Port Support for VM.
2026-03-20 11:02:15 (6700): Disabling Audio Support for VM.
2026-03-20 11:02:15 (6700): Disabling Clipboard Support for VM.
2026-03-20 11:02:15 (6700): Disabling Drag and Drop Support for VM.
2026-03-20 11:02:16 (6700): Adding storage controller(s) to VM.
2026-03-20 11:02:16 (6700): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-20 11:02:16 (6700): Adding VirtualBox Guest Additions to VM.
2026-03-20 11:02:17 (6700): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-20 11:02:17 (6700): forwarding host port 64532 to guest port 80
2026-03-20 11:02:17 (6700): Enabling remote desktop for VM.
2026-03-20 11:02:18 (6700): Required extension pack not installed, remote desktop not enabled.
2026-03-20 11:02:18 (6700): Enabling shared directory for VM.
2026-03-20 11:02:18 (6700): Starting VM using VBoxManage interface. (boinc_4a96fdcffcb5f3fd, slot#0)
2026-03-20 11:02:24 (6700): Successfully started VM. (PID = '6992')
2026-03-20 11:02:24 (6700): Reporting VM Process ID to BOINC.
2026-03-20 11:02:24 (6700): Guest Log: BIOS: VirtualBox 6.1.34
2026-03-20 11:02:24 (6700): Guest Log: CPUID EDX: 0x178bfbff
2026-03-20 11:02:24 (6700): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-20 11:02:24 (6700): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-20 11:02:24 (6700): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-20 11:02:24 (6700): Detected: Web Application Enabled (http://localhost:64532)
2026-03-20 11:02:24 (6700): Preference change detected
2026-03-20 11:02:24 (6700): Setting CPU throttle for VM. (100%)
2026-03-20 11:02:24 (6700): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-20 11:02:26 (6700): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-20 11:02:26 (6700): Guest Log: BIOS: Booting from Hard Disk...
2026-03-20 11:02:29 (6700): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-20 11:02:29 (6700): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-20 11:02:29 (6700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-20 11:02:38 (6700): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-20 11:02:38 (6700): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-20 11:02:51 (6700): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.000725 main     Log opened 2026-03-20T11:02:49.954761000Z
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.000921 main     OS Product: Linux
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.000995 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.001059 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.001123 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.001125 main     Process ID: 1281
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.001126 main     Package type: LINUX_64BITS_GENERIC
2026-03-20 11:02:51 (6700): Guest Log: 00:00:00.003546 main     5.2.32 r132073 started. Verbose level = 0
2026-03-20 11:02:52 (6700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-20 11:02:52 (6700): Guest Log: [INFO] Mounting shared directory
2026-03-20 11:02:52 (6700): Guest Log: [INFO] Checking for init_data.xml
2026-03-20 11:03:01 (6700): Guest Log: 00:00:10.022855 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 758 457 000ns (GuestNow=1 774 000 981 202 172 000 ns GuestLast=1 774 004 569 960 629 000 ns fSetTimeLastLoop=true )
2026-03-20 11:03:42 (6700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-20 11:03:42 (6700): Guest Log: [INFO] Detected branch: prod
2026-03-20 11:03:42 (6700): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-20 11:03:42 (6700): Guest Log: Copying input files
2026-03-20 11:03:44 (6700): Guest Log: Copied input files into RunAtlas.
2026-03-20 11:03:44 (6700): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-20 11:03:44 (6700): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-20 11:03:44 (6700): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-20 11:03:44 (6700): Guest Log: Further information can be found at the LHC@home message board.
2026-03-20 11:03:53 (6700): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-20 11:03:53 (6700): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-20 11:03:53 (6700): Guest Log: 2.6.3.0 1579 0 30188 157496 4 1 3117744 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-20 11:03:57 (6700): Guest Log: copied the webapp to /var/www
2026-03-20 11:03:57 (6700): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-20 11:03:57 (6700): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-20 11:03:58 (6700): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-20 11:03:58 (6700): Guest Log:  *** Starting ATLAS job. (PandaID=7057313703 taskID=49176589) ***
2026-03-20 12:43:01 (6700): Status Report: Elapsed Time: '6004.555866'
2026-03-20 12:43:11 (6700): Status Report: CPU Time: '21034.062500'
2026-03-20 14:23:30 (6700): Status Report: Elapsed Time: '12004.657003'
2026-03-20 14:23:30 (6700): Status Report: CPU Time: '44835.609375'
2026-03-20 16:04:18 (6700): Status Report: Elapsed Time: '18005.351227'
2026-03-20 16:04:18 (6700): Status Report: CPU Time: '68637.890625'
2026-03-20 17:44:52 (6700): Status Report: Elapsed Time: '24006.017700'
2026-03-20 17:44:52 (6700): Status Report: CPU Time: '92388.500000'
2026-03-20 18:27:12 (6700): Guest Log:  *** Job finished ***
2026-03-20 18:27:12 (6700): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:26:53,431 | INFO     | all workflow threads have been joined
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:26:53,431 | INFO     | end of generic workflow (traces error code: 0)
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:26:53,432 | INFO     | traces error code: 0
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:26:53,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,092 | INFO     | PID=5978 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,093 | INFO     | found 0 job(s) in 20 queues
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,093 | INFO     | [monitor] control thread has ended
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,255 [wrapper] ==== pilot stdout END ====
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,262 [wrapper] ==== wrapper stdout RESUME ====
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,270 [wrapper] pilotpid: 5978
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,277 [wrapper] Pilot exit status: 0
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,343 [wrapper] pandaids: 7057313703
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,385 [wrapper] cleanup supervisor_pilot 31938 5979
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,397 [wrapper] Test setup, not cleaning
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,404 [wrapper] apfmon messages muted
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,410 [wrapper] ==== wrapper stdout END ====
2026-03-20 18:27:12 (6700): Guest Log: 2026-03-20 17:27:11,417 [wrapper] ==== wrapper stderr END ====
2026-03-20 18:27:12 (6700): Guest Log:  *** Error codes and diagnostics ***
2026-03-20 18:27:12 (6700): Guest Log:     "exeErrorCode": 0,
2026-03-20 18:27:12 (6700): Guest Log:     "exeErrorDiag": "",
2026-03-20 18:27:12 (6700): Guest Log:     "pilotErrorCode": 0,
2026-03-20 18:27:12 (6700): Guest Log:     "pilotErrorDiag": "",
2026-03-20 18:27:12 (6700): Guest Log:  *** Listing of results directory ***
2026-03-20 18:27:12 (6700): Guest Log: total 237988
2026-03-20 18:27:12 (6700): Guest Log: -rw-r--r--. 1 atlas atlas    602624 Mar 10 16:47 pilot3.tar.gz
2026-03-20 18:27:12 (6700): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 17 15:26 runpilot2-wrapper.sh
2026-03-20 18:27:12 (6700): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 17 15:28 queuedata.json
2026-03-20 18:27:12 (6700): Guest Log: -rwxr-xr-x. 1 atlas atlas      5818 Mar 20 10:03 init_data.xml
2026-03-20 18:27:12 (6700): Guest Log: -rwxr-xr-x. 1 atlas atlas    616304 Mar 20 10:03 input.tar.gz
2026-03-20 18:27:12 (6700): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 20 10:03 start_atlas.sh
2026-03-20 18:27:12 (6700): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 20 10:03 EVNT.49134465._000010.pool.root.1 -> /data/./ATLAS.root_0
2026-03-20 18:27:12 (6700): Guest Log: -rw-r--r--. 1 atlas atlas      2600 Mar 20 10:03 pandaJob.out
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas   1010749 Mar 20 10:05 agis_schedconf.cvmfs.json
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas       423 Mar 20 10:05 workernode_map.json
2026-03-20 18:27:12 (6700): Guest Log: drwx------. 7 atlas atlas      4096 Mar 20 10:05 pilot3
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas 231388770 Mar 20 17:25 HITS.49176589._000233.pool.root.1
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas      1027 Mar 20 17:26 memory_monitor_summary.json
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 20 17:26 agis_ddmendpoints.agis.ALL.json
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas    560358 Mar 20 17:26 log.49176589._000233.job.log.tgz.1
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas        95 Mar 20 17:26 pilot_heartbeat.json
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas      6353 Mar 20 17:26 heartbeat.json
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas       744 Mar 20 17:27 pilotlog.txt
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas   3645557 Mar 20 17:27 log.49176589._000233.job.log.1
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas       357 Mar 20 17:27 output.list
2026-03-20 18:27:12 (6700): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 20 17:27 runtime_log
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas   4218880 Mar 20 17:27 result.tar.gz
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas       652 Mar 20 17:27 UthMDmrUlM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTVxLDmyI8Prn.diag
2026-03-20 18:27:12 (6700): Guest Log: -rw-r--r--. 1 atlas atlas      8731 Mar 20 17:27 runtime_log.err
2026-03-20 18:27:12 (6700): Guest Log: Looking for outputfile HITS.49176589._000233.pool.root.1
2026-03-20 18:27:12 (6700): Guest Log: HITS file was successfully produced
2026-03-20 18:27:12 (6700): Guest Log: -rw-------. 1 atlas atlas 231388770 Mar 20 17:25 /home/atlas/RunAtlas/HITS.49176589._000233.pool.root.1
2026-03-20 18:27:13 (6700): Guest Log: Successfully finished the ATLAS job!
2026-03-20 18:27:13 (6700): Guest Log: Copying the results back to the shared directory!
2026-03-20 18:27:13 (6700): Guest Log:  *** Contents of shared directory: ***
2026-03-20 18:27:13 (6700): Guest Log: total 468936
2026-03-20 18:27:13 (6700): Guest Log: -rwxrwxrwx. 1 root root 243934594 Mar 20 10:02 ATLAS.root_0
2026-03-20 18:27:13 (6700): Guest Log: -rwxrwxrwx. 1 root root 231388770 Mar 20 17:27 HITS.pool.root.1
2026-03-20 18:27:13 (6700): Guest Log: -rwxrwxrwx. 1 root root      5818 Mar 20 10:02 init_data.xml
2026-03-20 18:27:13 (6700): Guest Log: -rwxrwxrwx. 1 root root    616304 Mar 20 09:18 input.tar.gz
2026-03-20 18:27:13 (6700): Guest Log: -rwxrwxrwx. 1 root root   4218880 Mar 20 17:27 result.tar.gz
2026-03-20 18:27:13 (6700): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 20 09:18 start_atlas.sh
2026-03-20 18:27:13 (6700): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-20 18:27:13 (6700): VM Completion File Detected.
2026-03-20 18:27:13 (6700): Powering off VM.
2026-03-20 18:27:15 (6700): Successfully stopped VM.
2026-03-20 18:27:15 (6700): Deregistering VM. (boinc_4a96fdcffcb5f3fd, slot#0)
2026-03-20 18:27:15 (6700): Removing network bandwidth throttle group from VM.
2026-03-20 18:27:15 (6700): Removing VM from VirtualBox.
2026-03-20 18:27:20 (6700): called boinc_finish(0)

</stderr_txt>
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