Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:57:37 (540089): wrapper (7.7.26015): starting
02:57:37 (540089): wrapper: running run_atlas (--nthreads 9)
[2026-03-20 02:57:37] Arguments: --nthreads 9
[2026-03-20 02:57:37] Threads: 9
[2026-03-20 02:57:37] Checking for CVMFS
[2026-03-20 02:57:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 02:57:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 02:57:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 02:57:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 02:57:39] 2.13.3.0 13693 193877 375248 157487 0 722 33345379 40960000 20154 16776704 0 463122450 99.588 537190460 38197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-20 02:57:39] CVMFS is ok
[2026-03-20 02:57:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 02:57:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 02:57:39] Further information can be found at the LHC@home message board.
[2026-03-20 02:57:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 02:57:39] Checking for apptainer binary...
[2026-03-20 02:57:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 02:57:39] Running /usr/bin/apptainer --version
[2026-03-20 02:57:40] apptainer version 1.4.5-2.el9
[2026-03-20 02:57:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 02:57:41] c6-5-37-3.aglt2.org
[2026-03-20 02:57:41] apptainer works
[2026-03-20 02:57:41] Set ATHENA_PROC_NUMBER=9
[2026-03-20 02:57:41] Set ATHENA_CORE_NUMBER=9
[2026-03-20 02:57:41] Starting ATLAS job with PandaID=7050986900
[2026-03-20 02:57:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 07:02:46]  *** The last 200 lines of the pilot log: ***
[2026-03-20 07:02:46] 2026-03-20 11:01:52,844 | INFO     | preparing for final server update for job 7050986900 in state='finished'
[2026-03-20 07:02:46] 2026-03-20 11:01:52,923 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,923 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7050986900/jobReport.json
[2026-03-20 07:02:46] 2026-03-20 11:01:52,924 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-20 07:02:46] 2026-03-20 11:01:52,925 | INFO     | this job has now completed (state=finished)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,925 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,925 | INFO     | log transfer has been attempted: DONE
[2026-03-20 07:02:46] 2026-03-20 11:01:52,925 | INFO     | job 7050986900 has finished - writing final server update
[2026-03-20 07:02:46] 2026-03-20 11:01:52,925 | INFO     | total number of processed events: 400 (read)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,930 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050986900/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,931 | INFO     | extracted standard info from prmon json
[2026-03-20 07:02:46] 2026-03-20 11:01:52,931 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 07:02:46] 2026-03-20 11:01:52,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 07:02:46] 2026-03-20 11:01:52,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 07:02:46] 2026-03-20 11:01:52,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 07:02:46] 2026-03-20 11:01:52,933 | INFO     | fitting pss+swap vs Time
[2026-03-20 07:02:46] 2026-03-20 11:01:52,933 | INFO     | sum of square deviations: 4180186911.3655405
[2026-03-20 07:02:46] 2026-03-20 11:01:52,934 | INFO     | sum of deviations: 71309843270.97896
[2026-03-20 07:02:46] 2026-03-20 11:01:52,934 | INFO     | mean x: 1773997268.7436974
[2026-03-20 07:02:46] 2026-03-20 11:01:52,934 | INFO     | mean y: 2524882.819327731
[2026-03-20 07:02:46] 2026-03-20 11:01:52,934 | INFO     | intersect: -30260109271.96131
[2026-03-20 07:02:46] 2026-03-20 11:01:52,934 | INFO     | chi2: 3.269151865645569
[2026-03-20 07:02:46] 2026-03-20 11:01:52,935 | INFO     | sum of square deviations: 3922236973.5622253
[2026-03-20 07:02:46] 2026-03-20 11:01:52,935 | INFO     | sum of deviations: 83969871625.82411
[2026-03-20 07:02:46] 2026-03-20 11:01:52,935 | INFO     | mean x: 1773997116.248927
[2026-03-20 07:02:46] 2026-03-20 11:01:52,935 | INFO     | mean y: 2532211.296137339
[2026-03-20 07:02:46] 2026-03-20 11:01:52,935 | INFO     | intersect: -37976384187.70847
[2026-03-20 07:02:46] 2026-03-20 11:01:52,936 | INFO     | chi2: 2.5959997134788253
[2026-03-20 07:02:46] 2026-03-20 11:01:52,936 | INFO     | current chi2=2.5959997134788253 (change=20.59103338822145 %)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,936 | INFO     | right removable region: 232
[2026-03-20 07:02:46] 2026-03-20 11:01:52,936 | INFO     | sum of square deviations: 3922201593.5622253
[2026-03-20 07:02:46] 2026-03-20 11:01:52,937 | INFO     | sum of deviations: 12073948965.639477
[2026-03-20 07:02:46] 2026-03-20 11:01:52,937 | INFO     | mean x: 1773997421.248927
[2026-03-20 07:02:46] 2026-03-20 11:01:52,937 | INFO     | mean y: 2559728.557939914
[2026-03-20 07:02:46] 2026-03-20 11:01:52,937 | INFO     | intersect: -5458443184.82935
[2026-03-20 07:02:46] 2026-03-20 11:01:52,937 | INFO     | chi2: 0.7676826377657535
[2026-03-20 07:02:46] 2026-03-20 11:01:52,937 | INFO     | current chi2=0.7676826377657535 (change=76.51737608665185 %)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,937 | INFO     | sum of square deviations: 3675053688.2456164
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | sum of deviations: 1527780117.8947334
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | mean x: 1773997573.754386
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | mean y: 2566212.8552631577
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | intersect: -734913686.0218794
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | chi2: 0.7007688366287949
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | current chi2=0.7007688366287949 (change=8.716336392822834 %)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | left removable region: 20
[2026-03-20 07:02:46] 2026-03-20 11:01:52,938 | INFO     | sum of square deviations: 2954355461.6745205
[2026-03-20 07:02:46] 2026-03-20 11:01:52,939 | INFO     | sum of deviations: 13454360066.11321
[2026-03-20 07:02:46] 2026-03-20 11:01:52,939 | INFO     | mean x: 1773997695.768868
[2026-03-20 07:02:46] 2026-03-20 11:01:52,939 | INFO     | mean y: 2575546.4716981133
[2026-03-20 07:02:46] 2026-03-20 11:01:52,939 | INFO     | intersect: -8076345241.821391
[2026-03-20 07:02:46] 2026-03-20 11:01:52,939 | INFO     | chi2: 0.002309905496477504
[2026-03-20 07:02:46] 2026-03-20 11:01:52,939 | INFO     | current memory leak: 4.55 B/s (using 212 data points, chi2=0.00)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | could have reported an average CPU frequency of 3164 MHz (12 samples)
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | ..............................
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . Timing measurements:
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . get job = 0 s
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . initial setup = 33 s
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . payload setup = 54 s
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . stage-in = 0 s
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . payload execution = 14492 s
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . stage-out = 2 s
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | . log creation = 0 s
[2026-03-20 07:02:46] 2026-03-20 11:01:52,940 | INFO     | ..............................
[2026-03-20 07:02:46] 2026-03-20 11:01:53,261 | INFO     | 
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | job summary report
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | --------------------------------------------------
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | PanDA job id: 7050986900
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | task id: 48967011
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | errors: (none)
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | pilot state: finished 
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | transexitcode: 0
[2026-03-20 07:02:46] 2026-03-20 11:01:53,262 | INFO     | exeerrorcode: 0
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | exeerrordiag: 
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | exitcode: 0
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | exitmsg: OK
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | cpuconsumptiontime: 46916 s
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | nevents: 400
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | neventsw: 0
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | pid: 563550
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | pgrp: 563550
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | corecount: 9
[2026-03-20 07:02:46] 2026-03-20 11:01:53,263 | INFO     | event service: False
[2026-03-20 07:02:46] 2026-03-20 11:01:53,264 | INFO     | sizes: {0: 2279102, 1: 2279703, 2: 2279815, 3: 2280276, 14549: 2311040, 14550: 2311039, 14552: 2320221, 14553: 2320277, 14555: 2320471}
[2026-03-20 07:02:46] 2026-03-20 11:01:53,264 | INFO     | --------------------------------------------------
[2026-03-20 07:02:46] 2026-03-20 11:01:53,264 | INFO     | 
[2026-03-20 07:02:46] 2026-03-20 11:01:53,264 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-20 07:02:46] 2026-03-20 11:01:53,291 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 07:02:46] 2026-03-20 11:01:53,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,294 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 07:02:46] 2026-03-20 11:01:53,294 | INFO     | job 7050986900 has completed (purged errors)
[2026-03-20 07:02:46] 2026-03-20 11:01:53,294 | INFO     | overall cleanup function is called
[2026-03-20 07:02:46] 2026-03-20 11:01:54,259 | INFO     | PID=549871 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 07:02:46] 2026-03-20 11:01:54,259 | INFO     | .. there are 36 such processes running
[2026-03-20 07:02:46] 2026-03-20 11:01:54,303 | INFO     | --- collectZombieJob: --- 10, [563550]
[2026-03-20 07:02:46] 2026-03-20 11:01:54,303 | INFO     | zombie collector waiting for pid 563550
[2026-03-20 07:02:46] 2026-03-20 11:01:54,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 07:02:46] 2026-03-20 11:01:54,304 | INFO     | collected zombie processes
[2026-03-20 07:02:46] 2026-03-20 11:01:54,304 | INFO     | will attempt to kill all subprocesses of pid=563550
[2026-03-20 07:02:46] 2026-03-20 11:01:54,673 | INFO     | process IDs to be killed: [563550] (in reverse order)
[2026-03-20 07:02:46] 2026-03-20 11:01:54,764 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 07:02:46] 2026-03-20 11:01:54,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 07:02:46] 2026-03-20 11:01:54,778 | INFO     | did not find any defunct processes belonging to 563550
[2026-03-20 07:02:46] 2026-03-20 11:01:54,793 | INFO     | did not find any defunct processes belonging to 563550
[2026-03-20 07:02:46] 2026-03-20 11:01:54,793 | INFO     | ready for new job
[2026-03-20 07:02:46] 2026-03-20 11:01:54,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 07:02:46] 2026-03-20 11:01:54,795 | INFO     | **************************************
[2026-03-20 07:02:46] 2026-03-20 11:01:54,795 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 07:02:46] 2026-03-20 11:01:54,795 | INFO     | **************************************
[2026-03-20 07:02:46] 2026-03-20 11:01:54,795 | INFO     | 
[2026-03-20 07:02:46] 2026-03-20 11:01:54,798 | INFO     | architecture information:
[2026-03-20 07:02:46] 2026-03-20 11:01:54,798 | INFO     | executing command: cat /etc/os-release
[2026-03-20 07:02:46] 2026-03-20 11:01:54,810 | INFO     | cat /etc/os-release:
[2026-03-20 07:02:46] NAME="CentOS Linux"
[2026-03-20 07:02:46] VERSION="7 (Core)"
[2026-03-20 07:02:46] ID="centos"
[2026-03-20 07:02:46] ID_LIKE="rhel fedora"
[2026-03-20 07:02:46] VERSION_ID="7"
[2026-03-20 07:02:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 07:02:46] ANSI_COLOR="0;31"
[2026-03-20 07:02:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 07:02:46] HOME_URL="https://www.centos.org/"
[2026-03-20 07:02:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 07:02:46] 
[2026-03-20 07:02:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 07:02:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 07:02:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 07:02:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 07:02:46] 
[2026-03-20 07:02:46] 2026-03-20 11:01:54,810 | INFO     | **************************************
[2026-03-20 07:02:46] 2026-03-20 11:01:55,314 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-20 07:02:46] 2026-03-20 11:01:55,329 | INFO     | sufficient remaining disk space (75032952832 B)
[2026-03-20 07:02:46] 2026-03-20 11:01:55,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 07:02:46] 2026-03-20 11:01:55,330 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 07:02:46] 2026-03-20 11:01:55,330 | INFO     | update_server=False
[2026-03-20 07:02:46] 2026-03-20 11:01:55,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 07:02:46] 2026-03-20 11:01:55,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 07:02:46] 2026-03-20 11:01:55,362 | INFO     | aborting loop
[2026-03-20 07:02:46] 2026-03-20 11:01:55,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 07:02:46] 2026-03-20 11:01:55,689 | INFO     | all payload control threads have been joined
[2026-03-20 07:02:46] 2026-03-20 11:01:55,893 | INFO     | all data control threads have been joined
[2026-03-20 07:02:46] 2026-03-20 11:01:56,335 | INFO     | [job] retrieve thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,368 | INFO     | [job] job monitor thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,382 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,617 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,622 | INFO     | [data] copytool_in thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,695 | INFO     | [payload] control thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,759 | INFO     | [payload] validate_post thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,763 | INFO     | [job] validate thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,768 | INFO     | all job control threads have been joined
[2026-03-20 07:02:46] 2026-03-20 11:01:56,899 | INFO     | [data] control thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:56,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 07:02:46] 2026-03-20 11:01:57,055 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:57,344 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:57,387 | INFO     | [payload] failed_post thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:57,393 | INFO     | [data] copytool_out thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:57,773 | INFO     | [job] control thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:01:57,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 07:02:46] 2026-03-20 11:01:58,998 | INFO     | [job] queue monitor thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:02:00,941 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 07:02:46] 2026-03-20 11:02:26,725 | INFO     | PID=549871 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-20 07:02:46] 2026-03-20 11:02:26,725 | INFO     | .. there are 36 such processes running
[2026-03-20 07:02:46] 2026-03-20 11:02:26,725 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 07:02:46] 2026-03-20 11:02:26,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 07:02:46] 2026-03-20 11:02:26,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 07:02:46] 2026-03-20 11:02:39,751 | INFO     | [monitor] cgroup control has ended
[2026-03-20 07:02:46] 2026-03-20 11:02:41,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721110452032)>', '<ExcThread(monitor, started 139720763885312)>']
[2026-03-20 07:02:46] 2026-03-20 11:02:41,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 07:02:46] 2026-03-20 11:02:41,798 | INFO     | [monitor] control thread has ended
[2026-03-20 07:02:46] 2026-03-20 11:02:46,433 | INFO     | all workflow threads have been joined
[2026-03-20 07:02:46] 2026-03-20 11:02:46,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 07:02:46] 2026-03-20 11:02:46,434 | INFO     | traces error code: 0
[2026-03-20 07:02:46] 2026-03-20 11:02:46,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 07:02:46] 2026-03-20 11:02:46,594 [wrapper] ==== pilot stdout END ====
[2026-03-20 07:02:46] 2026-03-20 11:02:46,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 07:02:46] 2026-03-20 11:02:46,600 [wrapper] pilotpid: 549871
[2026-03-20 07:02:46] 2026-03-20 11:02:46,602 [wrapper] Pilot exit status: 0
[2026-03-20 07:02:46] 2026-03-20 11:02:46,612 [wrapper] pandaids: 7050986900
[2026-03-20 07:02:46] 2026-03-20 11:02:46,686 [wrapper] cleanup supervisor_pilot 1556721 549872
[2026-03-20 07:02:46] 2026-03-20 11:02:46,688 [wrapper] Test setup, not cleaning
[2026-03-20 07:02:46] 2026-03-20 11:02:46,690 [wrapper] apfmon messages muted
[2026-03-20 07:02:46] 2026-03-20 11:02:46,692 [wrapper] ==== wrapper stdout END ====
[2026-03-20 07:02:46] 2026-03-20 11:02:46,694 [wrapper] ==== wrapper stderr END ====
[2026-03-20 07:02:46]  *** Error codes and diagnostics ***
[2026-03-20 07:02:46]     "exeErrorCode": 0,
[2026-03-20 07:02:46]     "exeErrorDiag": "",
[2026-03-20 07:02:46]     "pilotErrorCode": 0,
[2026-03-20 07:02:46]     "pilotErrorDiag": "",
[2026-03-20 07:02:46]  *** Listing of results directory ***
[2026-03-20 07:02:46] total 424288
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 21:25 pilot3.tar.gz
[2026-03-20 07:02:46] -rwx------. 1 boincer umatlas     36322 Mar 11 22:14 runpilot2-wrapper.sh
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 22:14 queuedata.json
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas       100 Mar 20 02:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 07:02:46] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 20 02:57 run_atlas
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas       105 Mar 20 02:57 job.xml
[2026-03-20 07:02:46] -rw-r--r--. 2 boincer umatlas 216427541 Mar 20 02:57 EVNT.48967008._000521.pool.root.1
[2026-03-20 07:02:46] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 02:57 start_atlas.sh
[2026-03-20 07:02:46] drwxrwx--x. 2 boincer umatlas      4096 Mar 20 02:57 shared
[2026-03-20 07:02:46] -rw-r--r--. 2 boincer umatlas    597527 Mar 20 02:57 input.tar.gz
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas         0 Mar 20 02:57 boinc_lockfile
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas      2563 Mar 20 02:57 pandaJob.out
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas        57 Mar 20 02:57 setup.sh.local
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas   1010740 Mar 20 02:58 agis_schedconf.cvmfs.json
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas       441 Mar 20 02:59 workernode_map.json
[2026-03-20 07:02:46] drwx------. 5 boincer umatlas      4096 Mar 20 02:59 pilot3
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas      6843 Mar 20 07:00 init_data.xml
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas 209524071 Mar 20 07:01 HITS.48967011._014153.pool.root.1
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas       530 Mar 20 07:01 boinc_task_state.xml
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas        95 Mar 20 07:01 pilot_heartbeat.json
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas      1043 Mar 20 07:01 memory_monitor_summary.json
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas   1511579 Mar 20 07:01 agis_ddmendpoints.agis.ALL.json
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas    477425 Mar 20 07:01 log.48967011._014153.job.log.tgz.1
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas      6392 Mar 20 07:01 heartbeat.json
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas        28 Mar 20 07:02 wrapper_checkpoint.txt
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas      8192 Mar 20 07:02 boinc_mmap_file
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas      4819 Mar 20 07:02 pilotlog.txt
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas   1808946 Mar 20 07:02 log.48967011._014153.job.log.1
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas       357 Mar 20 07:02 output.list
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas       620 Mar 20 07:02 runtime_log
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas   2304000 Mar 20 07:02 result.tar.gz
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas      9347 Mar 20 07:02 runtime_log.err
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas       658 Mar 20 07:02 JFcMDmnkkK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpglLDmYgbe7n.diag
[2026-03-20 07:02:46] -rw-r--r--. 1 boincer umatlas     21457 Mar 20 07:02 stderr.txt
[2026-03-20 07:02:46] HITS file was successfully produced:
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas 209524071 Mar 20 07:01 shared/HITS.pool.root.1
[2026-03-20 07:02:46]  *** Contents of shared directory: ***
[2026-03-20 07:02:46] total 418832
[2026-03-20 07:02:46] -rw-r--r--. 2 boincer umatlas 216427541 Mar 20 02:57 ATLAS.root_0
[2026-03-20 07:02:46] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 02:57 start_atlas.sh
[2026-03-20 07:02:46] -rw-r--r--. 2 boincer umatlas    597527 Mar 20 02:57 input.tar.gz
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas 209524071 Mar 20 07:01 HITS.pool.root.1
[2026-03-20 07:02:46] -rw-------. 1 boincer umatlas   2304000 Mar 20 07:02 result.tar.gz
07:02:48 (540089): run_atlas exited; CPU time 47392.314927
07:02:48 (540089): called boinc_finish(0)

</stderr_txt>
]]>

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