Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
19:20:16 (217642): wrapper (7.7.26015): starting
19:20:16 (217642): wrapper: running run_atlas (--nthreads 4)
[2026-03-21 19:20:16] Arguments: --nthreads 4
[2026-03-21 19:20:16] Threads: 4
[2026-03-21 19:20:16] Checking for CVMFS
[2026-03-21 19:20:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-21 19:20:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-21 19:20:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-21 19:20:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-21 19:20:17] 2.13.3.0 11582 48635 47748 157547 2 49 20853667 33554433 0 130560 0 24354884 99.969 2029268 306 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-03-21 19:20:17] CVMFS is ok
[2026-03-21 19:20:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-21 19:20:17] Checking for apptainer binary...
[2026-03-21 19:20:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-21 19:20:17] Running /usr/bin/apptainer --version
[2026-03-21 19:20:17] apptainer version 1.4.5
[2026-03-21 19:20:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-21 19:20:17] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-03-21 19:20:17] apptainer works
[2026-03-21 19:20:17] Set ATHENA_PROC_NUMBER=4
[2026-03-21 19:20:17] Set ATHENA_CORE_NUMBER=4
[2026-03-21 19:20:17] Starting ATLAS job with PandaID=7057542232
[2026-03-21 19:20:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 21:19:41]  *** The last 200 lines of the pilot log: ***
[2026-03-21 21:19:41] 2026-03-21 19:19:03,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,831 | INFO     | job 7057542232 has state=finished
[2026-03-21 21:19:41] 2026-03-21 19:19:03,831 | INFO     | preparing for final server update for job 7057542232 in state='finished'
[2026-03-21 21:19:41] 2026-03-21 19:19:03,831 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7057542232/jobReport.json
[2026-03-21 21:19:41] 2026-03-21 19:19:03,832 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-03-21 21:19:41] 2026-03-21 19:19:03,833 | INFO     | this job has now completed (state=finished)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,833 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,833 | INFO     | log transfer has been attempted: DONE
[2026-03-21 21:19:41] 2026-03-21 19:19:03,833 | INFO     | job 7057542232 has finished - writing final server update
[2026-03-21 21:19:41] 2026-03-21 19:19:03,833 | INFO     | total number of processed events: 400 (read)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,835 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7057542232/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,835 | INFO     | extracted standard info from prmon json
[2026-03-21 21:19:41] 2026-03-21 19:19:03,835 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 21:19:41] 2026-03-21 19:19:03,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 21:19:41] 2026-03-21 19:19:03,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-21 21:19:41] 2026-03-21 19:19:03,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | fitting pss+swap vs Time
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | sum of square deviations: 496597218.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | sum of deviations: -26811719973.000008
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | mean x: 1774117181.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | mean y: 2527790.717948718
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | intersect: 95788672642.33925
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | chi2: 1.5078065822681384
[2026-03-21 21:19:41] 2026-03-21 19:19:03,836 | INFO     | sum of square deviations: 435610028.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | sum of deviations: -24045707180.999996
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | mean x: 1774117028.5
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | mean y: 2534711.535714286
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | intersect: 97933931672.25221
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | chi2: 1.5040694418125156
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | current chi2=1.5040694418125156 (change=0.24785277498929242 %)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | right removable region: 111
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | sum of square deviations: 435610028.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | sum of deviations: -38304585250.50001
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | mean x: 1774117333.5
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | mean y: 2555519.4553571427
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | intersect: 156006376086.78284
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | chi2: 0.20316145294390187
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | current chi2=0.20316145294390187 (change=86.52602692327463 %)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | sum of square deviations: 379832238.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | sum of deviations: -34829774143.999985
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | mean x: 1774117486.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | mean y: 2546006.4112149533
[2026-03-21 21:19:41] 2026-03-21 19:19:03,837 | INFO     | intersect: 162685186289.04318
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | chi2: 0.19828257298440402
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | current chi2=0.19828257298440402 (change=2.4014791629025365 %)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | left removable region: 20
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | sum of square deviations: 233641590.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | sum of deviations: -24582857687.000004
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | mean x: 1774117608.0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | mean y: 2531809.4505494507
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | intersect: 186668273458.7214
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | chi2: 0.17874628635387704
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | current memory leak: -105.22 B/s (using 91 data points, chi2=0.18)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | could have reported an average CPU frequency of 2956 MHz (7 samples)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | ..............................
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . Timing measurements:
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . get job = 0 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . initial setup = 3 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . payload setup = 4 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . stage-in = 0 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . payload execution = 7098 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . stage-out = 0 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | . log creation = 0 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,838 | INFO     | ..............................
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | 
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | job summary report
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | --------------------------------------------------
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | PanDA job id: 7057542232
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | task id: 49176195
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | errors: (none)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | pilot state: finished 
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | transexitcode: 0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | exeerrorcode: 0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | exeerrordiag: 
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | exitcode: 0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | exitmsg: OK
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | cpuconsumptiontime: 27651 s
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | nevents: 400
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | neventsw: 0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | pid: 226174
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | pgrp: 226174
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | corecount: 4
[2026-03-21 21:19:41] 2026-03-21 19:19:03,864 | INFO     | event service: False
[2026-03-21 21:19:41] 2026-03-21 19:19:03,865 | INFO     | sizes: {0: 2280310, 10: 2280310, 7106: 2316733, 7108: 2316871}
[2026-03-21 21:19:41] 2026-03-21 19:19:03,865 | INFO     | --------------------------------------------------
[2026-03-21 21:19:41] 2026-03-21 19:19:03,865 | INFO     | 
[2026-03-21 21:19:41] 2026-03-21 19:19:03,865 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | job 7057542232 has completed (purged errors)
[2026-03-21 21:19:41] 2026-03-21 19:19:03,874 | INFO     | overall cleanup function is called
[2026-03-21 21:19:41] 2026-03-21 19:19:04,880 | INFO     | --- collectZombieJob: --- 10, [226174]
[2026-03-21 21:19:41] 2026-03-21 19:19:04,880 | INFO     | zombie collector waiting for pid 226174
[2026-03-21 21:19:41] 2026-03-21 19:19:04,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 21:19:41] 2026-03-21 19:19:04,881 | INFO     | collected zombie processes
[2026-03-21 21:19:41] 2026-03-21 19:19:04,881 | INFO     | will attempt to kill all subprocesses of pid=226174
[2026-03-21 21:19:41] 2026-03-21 19:19:04,969 | INFO     | process IDs to be killed: [226174] (in reverse order)
[2026-03-21 21:19:41] 2026-03-21 19:19:04,998 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 21:19:41] 2026-03-21 19:19:04,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 21:19:41] 2026-03-21 19:19:05,001 | INFO     | did not find any defunct processes belonging to 226174
[2026-03-21 21:19:41] 2026-03-21 19:19:05,003 | INFO     | did not find any defunct processes belonging to 226174
[2026-03-21 21:19:41] 2026-03-21 19:19:05,003 | INFO     | ready for new job
[2026-03-21 21:19:41] 2026-03-21 19:19:05,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 21:19:41] 2026-03-21 19:19:05,004 | INFO     | **************************************
[2026-03-21 21:19:41] 2026-03-21 19:19:05,004 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 21:19:41] 2026-03-21 19:19:05,004 | INFO     | **************************************
[2026-03-21 21:19:41] 2026-03-21 19:19:05,004 | INFO     | 
[2026-03-21 21:19:41] 2026-03-21 19:19:05,005 | INFO     | architecture information:
[2026-03-21 21:19:41] 2026-03-21 19:19:05,005 | INFO     | executing command: cat /etc/os-release
[2026-03-21 21:19:41] 2026-03-21 19:19:05,010 | INFO     | cat /etc/os-release:
[2026-03-21 21:19:41] NAME="CentOS Linux"
[2026-03-21 21:19:41] VERSION="7 (Core)"
[2026-03-21 21:19:41] ID="centos"
[2026-03-21 21:19:41] ID_LIKE="rhel fedora"
[2026-03-21 21:19:41] VERSION_ID="7"
[2026-03-21 21:19:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 21:19:41] ANSI_COLOR="0;31"
[2026-03-21 21:19:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 21:19:41] HOME_URL="https://www.centos.org/"
[2026-03-21 21:19:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 21:19:41] 
[2026-03-21 21:19:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 21:19:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 21:19:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 21:19:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 21:19:41] 
[2026-03-21 21:19:41] 2026-03-21 19:19:05,011 | INFO     | **************************************
[2026-03-21 21:19:41] 2026-03-21 19:19:05,513 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-03-21 21:19:41] 2026-03-21 19:19:05,520 | INFO     | sufficient remaining disk space (70053265408 B)
[2026-03-21 21:19:41] 2026-03-21 19:19:05,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 21:19:41] 2026-03-21 19:19:05,521 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 21:19:41] 2026-03-21 19:19:05,521 | INFO     | update_server=False
[2026-03-21 21:19:41] 2026-03-21 19:19:05,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 21:19:41] 2026-03-21 19:19:05,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 21:19:41] 2026-03-21 19:19:05,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 21:19:41] 2026-03-21 19:19:05,523 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-21 21:19:41] 2026-03-21 19:19:05,523 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-21 21:19:41] 2026-03-21 19:19:05,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 21:19:41] 2026-03-21 19:19:05,523 | INFO     | will abort loop
[2026-03-21 21:19:41] 2026-03-21 19:19:05,997 | INFO     | all data control threads have been joined
[2026-03-21 21:19:41] 2026-03-21 19:19:06,402 | INFO     | all job control threads have been joined
[2026-03-21 21:19:41] 2026-03-21 19:19:06,526 | INFO     | [job] retrieve thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:06,526 | INFO     | [job] queue monitor thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:06,528 | INFO     | [job] job monitor thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:06,982 | INFO     | all payload control threads have been joined
[2026-03-21 21:19:41] 2026-03-21 19:19:07,003 | INFO     | [data] control thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,408 | INFO     | [job] control thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,526 | INFO     | [data] copytool_out thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,598 | INFO     | [payload] failed_post thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,608 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,693 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,696 | INFO     | [job] validate thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,778 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,788 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,854 | INFO     | [data] copytool_in thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,934 | INFO     | [payload] validate_post thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:07,986 | INFO     | [payload] control thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:08,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 21:19:41] 2026-03-21 19:19:12,418 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 21:19:41] 2026-03-21 19:19:35,050 | INFO     | [monitor] cgroup control has ended
[2026-03-21 21:19:41] 2026-03-21 19:19:35,416 | INFO     | PID=221511 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-21 21:19:41] 2026-03-21 19:19:35,417 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 21:19:41] 2026-03-21 19:19:35,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 21:19:41] 2026-03-21 19:19:35,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 21:19:41] 2026-03-21 19:19:35,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659676030784)>', '<ExcThread(monitor, started 140658828371712)>']
[2026-03-21 21:19:41] 2026-03-21 19:19:36,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 21:19:41] 2026-03-21 19:19:36,421 | INFO     | [monitor] control thread has ended
[2026-03-21 21:19:41] 2026-03-21 19:19:40,934 | INFO     | all workflow threads have been joined
[2026-03-21 21:19:41] 2026-03-21 19:19:40,934 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 21:19:41] 2026-03-21 19:19:40,934 | INFO     | traces error code: 0
[2026-03-21 21:19:41] 2026-03-21 19:19:40,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 21:19:41] 2026-03-21 19:19:40,974 [wrapper] ==== pilot stdout END ====
[2026-03-21 21:19:41] 2026-03-21 19:19:40,976 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 21:19:41] 2026-03-21 19:19:40,977 [wrapper] pilotpid: 221511
[2026-03-21 21:19:41] 2026-03-21 19:19:40,979 [wrapper] Pilot exit status: 0
[2026-03-21 21:19:41] 2026-03-21 19:19:40,984 [wrapper] pandaids: 7057542232
[2026-03-21 21:19:41] 2026-03-21 19:19:41,006 [wrapper] cleanup supervisor_pilot  301004 221512
[2026-03-21 21:19:41] 2026-03-21 19:19:41,007 [wrapper] Test setup, not cleaning
[2026-03-21 21:19:41] 2026-03-21 19:19:41,009 [wrapper] apfmon messages muted
[2026-03-21 21:19:41] 2026-03-21 19:19:41,010 [wrapper] ==== wrapper stdout END ====
[2026-03-21 21:19:41] 2026-03-21 19:19:41,012 [wrapper] ==== wrapper stderr END ====
[2026-03-21 21:19:41]  *** Error codes and diagnostics ***
[2026-03-21 21:19:41]     "exeErrorCode": 0,
[2026-03-21 21:19:41]     "exeErrorDiag": "",
[2026-03-21 21:19:41]     "pilotErrorCode": 0,
[2026-03-21 21:19:41]     "pilotErrorDiag": "",
[2026-03-21 21:19:41]  *** Listing of results directory ***
[2026-03-21 21:19:41] total 437564
[2026-03-21 21:19:41] -rw-r--r-- 1 ek ek      5111 Mar 17 23:36 queuedata.json
[2026-03-21 21:19:41] -rw-r--r-- 1 ek ek    585013 Mar 17 23:36 pilot3.tar.gz
[2026-03-21 21:19:41] -rwx------ 1 ek ek     36322 Mar 17 23:36 runpilot2-wrapper.sh
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek       100 Mar 21 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 21:19:41] -rwxr-xr-x 1 ek ek      7986 Mar 21 19:20 run_atlas
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek       105 Mar 21 19:20 job.xml
[2026-03-21 21:19:41] -rw-r--r-- 2 ek ek 236669246 Mar 21 19:20 EVNT.49132973._000005.pool.root.1
[2026-03-21 21:19:41] -rw-r--r-- 2 ek ek    597537 Mar 21 19:20 input.tar.gz
[2026-03-21 21:19:41] -rw-r--r-- 2 ek ek     15845 Mar 21 19:20 start_atlas.sh
[2026-03-21 21:19:41] drwxrwx--x 2 ek ek      4096 Mar 21 19:20 shared
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek         0 Mar 21 19:20 boinc_setup_complete
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek      9842 Mar 21 19:20 init_data.xml
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek         0 Mar 21 19:20 boinc_lockfile
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek      2621 Mar 21 19:20 pandaJob.out
[2026-03-21 21:19:41] -rw------- 1 ek ek        50 Mar 21 19:20 setup.sh.local
[2026-03-21 21:19:41] -rw------- 1 ek ek   1010663 Mar 21 19:20 agis_schedconf.cvmfs.json
[2026-03-21 21:19:41] -rw------- 1 ek ek   1511579 Mar 21 19:20 agis_ddmendpoints.agis.ALL.json
[2026-03-21 21:19:41] -rw------- 1 ek ek       432 Mar 21 19:20 workernode_map.json
[2026-03-21 21:19:41] drwx------ 5 ek ek      4096 Mar 21 19:20 pilot3
[2026-03-21 21:19:41] -rw------- 1 ek ek 204794504 Mar 21 21:18 HITS.49176195._000120.pool.root.1
[2026-03-21 21:19:41] -rw------- 1 ek ek      1017 Mar 21 21:18 memory_monitor_summary.json
[2026-03-21 21:19:41] -rw------- 1 ek ek    311372 Mar 21 21:19 log.49176195._000120.job.log.tgz.1
[2026-03-21 21:19:41] -rw------- 1 ek ek      6309 Mar 21 21:19 heartbeat.json
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek      8192 Mar 21 21:19 boinc_mmap_file
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek        27 Mar 21 21:19 wrapper_checkpoint.txt
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek       529 Mar 21 21:19 boinc_task_state.xml
[2026-03-21 21:19:41] -rw------- 1 ek ek        95 Mar 21 21:19 pilot_heartbeat.json
[2026-03-21 21:19:41] -rw------- 1 ek ek      4929 Mar 21 21:19 pilotlog.txt
[2026-03-21 21:19:41] -rw------- 1 ek ek   1015767 Mar 21 21:19 log.49176195._000120.job.log.1
[2026-03-21 21:19:41] -rw------- 1 ek ek       357 Mar 21 21:19 output.list
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek       620 Mar 21 21:19 runtime_log
[2026-03-21 21:19:41] -rw------- 1 ek ek   1341440 Mar 21 21:19 result.tar.gz
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek      9501 Mar 21 21:19 runtime_log.err
[2026-03-21 21:19:41] -rw------- 1 ek ek       661 Mar 21 21:19 JCiKDmsGrM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmF0xLDmisC2Dm.diag
[2026-03-21 21:19:41] -rw-rw-r-- 1 ek ek     21081 Mar 21 21:19 stderr.txt
[2026-03-21 21:19:41] HITS file was successfully produced:
[2026-03-21 21:19:41] -rw------- 1 ek ek 204794504 Mar 21 21:18 shared/HITS.pool.root.1
[2026-03-21 21:19:41]  *** Contents of shared directory: ***
[2026-03-21 21:19:41] total 433040
[2026-03-21 21:19:41] -rw-r--r-- 2 ek ek 236669246 Mar 21 19:20 ATLAS.root_0
[2026-03-21 21:19:41] -rw-r--r-- 2 ek ek    597537 Mar 21 19:20 input.tar.gz
[2026-03-21 21:19:41] -rw-r--r-- 2 ek ek     15845 Mar 21 19:20 start_atlas.sh
[2026-03-21 21:19:41] -rw------- 1 ek ek 204794504 Mar 21 21:18 HITS.pool.root.1
[2026-03-21 21:19:41] -rw------- 1 ek ek   1341440 Mar 21 21:19 result.tar.gz
21:19:42 (217642): run_atlas exited; CPU time 27717.563051
21:19:42 (217642): called boinc_finish(0)

</stderr_txt>
]]>

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