Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:57:04 (844859): wrapper (7.7.26015): starting
23:57:04 (844859): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 23:57:04] Arguments: --nthreads 8
[2026-03-19 23:57:04] Threads: 8
[2026-03-19 23:57:04] Checking for CVMFS
[2026-03-19 23:57:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 23:57:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 23:57:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 23:57:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 23:57:05] 2.13.3.0 12846 193652 341660 157482 1 594 25304759 32935937 40283 16776704 0 989566699 99.551 1206870385 34894 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 23:57:05] CVMFS is ok
[2026-03-19 23:57:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 23:57:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 23:57:05] Further information can be found at the LHC@home message board.
[2026-03-19 23:57:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 23:57:05] Checking for apptainer binary...
[2026-03-19 23:57:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 23:57:05] Running /usr/bin/apptainer --version
[2026-03-19 23:57:05] apptainer version 1.4.5-2.el9
[2026-03-19 23:57:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 23:57:05] c7-16-9.aglt2.org
[2026-03-19 23:57:05] apptainer works
[2026-03-19 23:57:05] Set ATHENA_PROC_NUMBER=8
[2026-03-19 23:57:05] Set ATHENA_CORE_NUMBER=8
[2026-03-19 23:57:05] Starting ATLAS job with PandaID=7050405969
[2026-03-19 23:57:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 04:36:32]  *** The last 200 lines of the pilot log: ***
[2026-03-20 04:36:33] 2026-03-20 08:35:38,620 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7050405969/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 04:36:33] 2026-03-20 08:35:38,621 | INFO     | extracted standard info from prmon json
[2026-03-20 04:36:33] 2026-03-20 08:35:38,621 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 04:36:33] 2026-03-20 08:35:38,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 04:36:33] 2026-03-20 08:35:38,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 04:36:33] 2026-03-20 08:35:38,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 04:36:33] 2026-03-20 08:35:38,632 | INFO     | fitting pss+swap vs Time
[2026-03-20 04:36:33] 2026-03-20 08:35:38,644 | INFO     | sum of square deviations: 6239899659.966943
[2026-03-20 04:36:33] 2026-03-20 08:35:38,645 | INFO     | sum of deviations: 17520703418.22795
[2026-03-20 04:36:33] 2026-03-20 08:35:38,645 | INFO     | mean x: 1773987402.5110295
[2026-03-20 04:36:33] 2026-03-20 08:35:38,645 | INFO     | mean y: 2496101.257352941
[2026-03-20 04:36:33] 2026-03-20 08:35:38,645 | INFO     | intersect: -4978594756.096751
[2026-03-20 04:36:33] 2026-03-20 08:35:38,646 | INFO     | chi2: 2.3502875444820686
[2026-03-20 04:36:33] 2026-03-20 08:35:38,646 | INFO     | sum of square deviations: 5902070984.966313
[2026-03-20 04:36:33] 2026-03-20 08:35:38,657 | INFO     | sum of deviations: 33874428000.921337
[2026-03-20 04:36:33] 2026-03-20 08:35:38,657 | INFO     | mean x: 1773987250.011236
[2026-03-20 04:36:33] 2026-03-20 08:35:38,657 | INFO     | mean y: 2503368.0262172283
[2026-03-20 04:36:33] 2026-03-20 08:35:38,657 | INFO     | intersect: -10179143638.274748
[2026-03-20 04:36:33] 2026-03-20 08:35:38,657 | INFO     | chi2: 1.6647982750851444
[2026-03-20 04:36:33] 2026-03-20 08:35:38,657 | INFO     | current chi2=1.6647982750851444 (change=29.166187388700347 %)
[2026-03-20 04:36:33] 2026-03-20 08:35:38,658 | INFO     | sum of square deviations: 5576661147.465653
[2026-03-20 04:36:33] 2026-03-20 08:35:38,659 | INFO     | sum of deviations: 32842895386.83966
[2026-03-20 04:36:33] 2026-03-20 08:35:38,659 | INFO     | mean x: 1773987097.5114503
[2026-03-20 04:36:33] 2026-03-20 08:35:38,659 | INFO     | mean y: 2502884.5534351147
[2026-03-20 04:36:33] 2026-03-20 08:35:38,660 | INFO     | intersect: -10445123593.101532
[2026-03-20 04:36:33] 2026-03-20 08:35:38,660 | INFO     | chi2: 1.6654727269505796
[2026-03-20 04:36:33] 2026-03-20 08:35:38,660 | INFO     | current chi2=1.6654727269505796 (change=-0.040512527885736706 %)
[2026-03-20 04:36:33] 2026-03-20 08:35:38,660 | INFO     | right removable region: 261
[2026-03-20 04:36:33] 2026-03-20 08:35:38,660 | INFO     | sum of square deviations: 5902069154.966313
[2026-03-20 04:36:33] 2026-03-20 08:35:38,671 | INFO     | sum of deviations: -26944405275.46067
[2026-03-20 04:36:33] 2026-03-20 08:35:38,671 | INFO     | mean x: 1773987555.011236
[2026-03-20 04:36:33] 2026-03-20 08:35:38,671 | INFO     | mean y: 2516009.4868913856
[2026-03-20 04:36:33] 2026-03-20 08:35:38,671 | INFO     | intersect: 8101207905.637529
[2026-03-20 04:36:33] 2026-03-20 08:35:38,672 | INFO     | chi2: 0.7611625952229171
[2026-03-20 04:36:33] 2026-03-20 08:35:38,672 | INFO     | current chi2=0.7611625952229171 (change=67.61406505302082 %)
[2026-03-20 04:36:33] 2026-03-20 08:35:38,672 | INFO     | sum of square deviations: 5576657487.465653
[2026-03-20 04:36:33] 2026-03-20 08:35:38,684 | INFO     | sum of deviations: -21721471264.045795
[2026-03-20 04:36:33] 2026-03-20 08:35:38,684 | INFO     | mean x: 1773987707.5114503
[2026-03-20 04:36:33] 2026-03-20 08:35:38,687 | INFO     | mean y: 2513558.5152671756
[2026-03-20 04:36:33] 2026-03-20 08:35:38,687 | INFO     | intersect: 6912319853.431236
[2026-03-20 04:36:33] 2026-03-20 08:35:38,687 | INFO     | chi2: 0.7522088897742638
[2026-03-20 04:36:33] 2026-03-20 08:35:38,687 | INFO     | current chi2=0.7522088897742638 (change=1.1763196858131268 %)
[2026-03-20 04:36:33] 2026-03-20 08:35:38,688 | INFO     | left removable region: 20
[2026-03-20 04:36:33] 2026-03-20 08:35:38,688 | INFO     | sum of square deviations: 4340312627.983376
[2026-03-20 04:36:33] 2026-03-20 08:35:38,693 | INFO     | sum of deviations: 7316865713.406639
[2026-03-20 04:36:33] 2026-03-20 08:35:38,693 | INFO     | mean x: 1773987677.0082989
[2026-03-20 04:36:33] 2026-03-20 08:35:38,695 | INFO     | mean y: 2514265.796680498
[2026-03-20 04:36:33] 2026-03-20 08:35:38,723 | INFO     | intersect: -2988060543.543443
[2026-03-20 04:36:33] 2026-03-20 08:35:38,723 | INFO     | chi2: 0.002709923772323288
[2026-03-20 04:36:33] 2026-03-20 08:35:38,723 | INFO     | current memory leak: 1.69 B/s (using 241 data points, chi2=0.00)
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | could have reported an average CPU frequency of 3174 MHz (13 samples)
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | ..............................
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . Timing measurements:
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . get job = 0 s
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . initial setup = 15 s
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . payload setup = 38 s
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . stage-in = 0 s
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . payload execution = 16608 s
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . stage-out = 3 s
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | . log creation = 0 s
[2026-03-20 04:36:33] 2026-03-20 08:35:38,724 | INFO     | ..............................
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | 
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | job summary report
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | --------------------------------------------------
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | PanDA job id: 7050405969
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | task id: 48967102
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | errors: (none)
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | pilot state: finished 
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | transexitcode: 0
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | exeerrorcode: 0
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | exeerrordiag: 
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | exitcode: 0
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | exitmsg: OK
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | cpuconsumptiontime: 37463 s
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | nevents: 400
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | neventsw: 0
[2026-03-20 04:36:33] 2026-03-20 08:35:39,355 | INFO     | pid: 877733
[2026-03-20 04:36:33] 2026-03-20 08:35:39,356 | INFO     | pgrp: 877733
[2026-03-20 04:36:33] 2026-03-20 08:35:39,356 | INFO     | corecount: 8
[2026-03-20 04:36:33] 2026-03-20 08:35:39,356 | INFO     | event service: False
[2026-03-20 04:36:33] 2026-03-20 08:35:39,356 | INFO     | sizes: {0: 2279815, 1: 2280276, 16652: 2311627, 16653: 2311626, 16658: 2320680, 16660: 2320736, 16662: 2321058}
[2026-03-20 04:36:33] 2026-03-20 08:35:39,356 | INFO     | --------------------------------------------------
[2026-03-20 04:36:33] 2026-03-20 08:35:39,356 | INFO     | 
[2026-03-20 04:36:33] 2026-03-20 08:35:39,356 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-20 04:36:33] 2026-03-20 08:35:39,460 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,460 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,468 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 04:36:33] 2026-03-20 08:35:39,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,468 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 04:36:33] 2026-03-20 08:35:39,468 | INFO     | job 7050405969 has completed (purged errors)
[2026-03-20 04:36:33] 2026-03-20 08:35:39,468 | INFO     | overall cleanup function is called
[2026-03-20 04:36:33] 2026-03-20 08:35:39,911 | INFO     | PID=860576 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 04:36:33] 2026-03-20 08:35:39,911 | INFO     | .. there are 70 such processes running
[2026-03-20 04:36:33] 2026-03-20 08:35:40,492 | INFO     | --- collectZombieJob: --- 10, [877733]
[2026-03-20 04:36:33] 2026-03-20 08:35:40,492 | INFO     | zombie collector waiting for pid 877733
[2026-03-20 04:36:33] 2026-03-20 08:35:40,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 04:36:33] 2026-03-20 08:35:40,496 | INFO     | collected zombie processes
[2026-03-20 04:36:33] 2026-03-20 08:35:40,496 | INFO     | will attempt to kill all subprocesses of pid=877733
[2026-03-20 04:36:33] 2026-03-20 08:35:43,020 | INFO     | process IDs to be killed: [877733] (in reverse order)
[2026-03-20 04:36:33] 2026-03-20 08:35:43,303 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 04:36:33] 2026-03-20 08:35:43,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 04:36:33] 2026-03-20 08:35:43,363 | INFO     | did not find any defunct processes belonging to 877733
[2026-03-20 04:36:33] 2026-03-20 08:35:43,569 | INFO     | did not find any defunct processes belonging to 877733
[2026-03-20 04:36:33] 2026-03-20 08:35:43,569 | INFO     | ready for new job
[2026-03-20 04:36:33] 2026-03-20 08:35:43,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 04:36:33] 2026-03-20 08:35:43,571 | INFO     | **************************************
[2026-03-20 04:36:33] 2026-03-20 08:35:43,571 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 04:36:33] 2026-03-20 08:35:43,571 | INFO     | **************************************
[2026-03-20 04:36:33] 2026-03-20 08:35:43,571 | INFO     | 
[2026-03-20 04:36:33] 2026-03-20 08:35:43,588 | INFO     | architecture information:
[2026-03-20 04:36:33] 2026-03-20 08:35:43,601 | INFO     | executing command: cat /etc/os-release
[2026-03-20 04:36:33] 2026-03-20 08:35:43,673 | INFO     | cat /etc/os-release:
[2026-03-20 04:36:33] NAME="CentOS Linux"
[2026-03-20 04:36:33] VERSION="7 (Core)"
[2026-03-20 04:36:33] ID="centos"
[2026-03-20 04:36:33] ID_LIKE="rhel fedora"
[2026-03-20 04:36:33] VERSION_ID="7"
[2026-03-20 04:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 04:36:33] ANSI_COLOR="0;31"
[2026-03-20 04:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 04:36:33] HOME_URL="https://www.centos.org/"
[2026-03-20 04:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 04:36:33] 
[2026-03-20 04:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 04:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 04:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 04:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 04:36:33] 
[2026-03-20 04:36:33] 2026-03-20 08:35:43,673 | INFO     | **************************************
[2026-03-20 04:36:33] 2026-03-20 08:35:44,177 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-20 04:36:33] 2026-03-20 08:35:44,253 | INFO     | sufficient remaining disk space (73205284864 B)
[2026-03-20 04:36:33] 2026-03-20 08:35:44,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 04:36:33] 2026-03-20 08:35:44,253 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 04:36:33] 2026-03-20 08:35:44,253 | INFO     | update_server=False
[2026-03-20 04:36:33] 2026-03-20 08:35:44,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 04:36:33] 2026-03-20 08:35:44,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 04:36:33] 2026-03-20 08:35:44,337 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-20 04:36:33] 2026-03-20 08:35:44,337 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-20 04:36:33] 2026-03-20 08:35:44,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 04:36:33] 2026-03-20 08:35:44,337 | INFO     | will abort loop
[2026-03-20 04:36:33] 2026-03-20 08:35:44,442 | INFO     | all data control threads have been joined
[2026-03-20 04:36:33] 2026-03-20 08:35:44,507 | INFO     | all job control threads have been joined
[2026-03-20 04:36:33] 2026-03-20 08:35:45,260 | INFO     | [job] retrieve thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,260 | INFO     | [job] queue monitor thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,342 | INFO     | [job] job monitor thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 04:36:33] 2026-03-20 08:35:45,394 | INFO     | [job] validate thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,394 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,448 | INFO     | [data] control thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,513 | INFO     | [job] control thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,543 | INFO     | [payload] validate_post thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,560 | INFO     | all payload control threads have been joined
[2026-03-20 04:36:33] 2026-03-20 08:35:45,775 | INFO     | [payload] failed_post thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,859 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:45,859 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:46,045 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:46,109 | INFO     | [data] copytool_in thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:46,570 | INFO     | [payload] control thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:47,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 04:36:33] 2026-03-20 08:35:47,392 | INFO     | [data] copytool_out thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:35:51,225 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 04:36:33] 2026-03-20 08:36:13,995 | INFO     | PID=860576 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-20 04:36:33] 2026-03-20 08:36:13,995 | INFO     | .. there are 70 such processes running
[2026-03-20 04:36:33] 2026-03-20 08:36:13,995 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 04:36:33] 2026-03-20 08:36:13,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 04:36:33] 2026-03-20 08:36:13,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 04:36:33] 2026-03-20 08:36:25,135 | INFO     | [monitor] cgroup control has ended
[2026-03-20 04:36:33] 2026-03-20 08:36:26,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977743247168)>', '<ExcThread(monitor, started 139977396573952)>']
[2026-03-20 04:36:33] 2026-03-20 08:36:27,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 04:36:33] 2026-03-20 08:36:27,073 | INFO     | [monitor] control thread has ended
[2026-03-20 04:36:33] 2026-03-20 08:36:32,003 | INFO     | all workflow threads have been joined
[2026-03-20 04:36:33] 2026-03-20 08:36:32,003 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 04:36:33] 2026-03-20 08:36:32,003 | INFO     | traces error code: 0
[2026-03-20 04:36:33] 2026-03-20 08:36:32,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 04:36:33] 2026-03-20 08:36:32,424 [wrapper] ==== pilot stdout END ====
[2026-03-20 04:36:33] 2026-03-20 08:36:32,438 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 04:36:33] 2026-03-20 08:36:32,465 [wrapper] pilotpid: 860576
[2026-03-20 04:36:33] 2026-03-20 08:36:32,488 [wrapper] Pilot exit status: 0
[2026-03-20 04:36:33] 2026-03-20 08:36:32,564 [wrapper] pandaids: 7050405969
[2026-03-20 04:36:33] 2026-03-20 08:36:32,729 [wrapper] cleanup supervisor_pilot 2504127 860577
[2026-03-20 04:36:33] 2026-03-20 08:36:32,756 [wrapper] Test setup, not cleaning
[2026-03-20 04:36:33] 2026-03-20 08:36:32,787 [wrapper] apfmon messages muted
[2026-03-20 04:36:33] 2026-03-20 08:36:32,807 [wrapper] ==== wrapper stdout END ====
[2026-03-20 04:36:33] 2026-03-20 08:36:32,811 [wrapper] ==== wrapper stderr END ====
[2026-03-20 04:36:33]  *** Error codes and diagnostics ***
[2026-03-20 04:36:33]     "exeErrorCode": 0,
[2026-03-20 04:36:33]     "exeErrorDiag": "",
[2026-03-20 04:36:33]     "pilotErrorCode": 0,
[2026-03-20 04:36:33]     "pilotErrorDiag": "",
[2026-03-20 04:36:33]  *** Listing of results directory ***
[2026-03-20 04:36:33] total 411732
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 19:24 pilot3.tar.gz
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 19:27 queuedata.json
[2026-03-20 04:36:33] -rwx------. 1 boincer umatlas     36322 Mar 11 19:27 runpilot2-wrapper.sh
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas       100 Mar 19 23:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 04:36:33] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 23:57 run_atlas
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas       105 Mar 19 23:57 job.xml
[2026-03-20 04:36:33] -rw-r--r--. 2 boincer umatlas 211730392 Mar 19 23:57 EVNT.48967100._000023.pool.root.1
[2026-03-20 04:36:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 23:57 start_atlas.sh
[2026-03-20 04:36:33] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 23:57 shared
[2026-03-20 04:36:33] -rw-r--r--. 2 boincer umatlas    597518 Mar 19 23:57 input.tar.gz
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas         0 Mar 19 23:57 boinc_lockfile
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas      2574 Mar 19 23:57 pandaJob.out
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas        57 Mar 19 23:57 setup.sh.local
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas   1010740 Mar 19 23:57 agis_schedconf.cvmfs.json
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas       428 Mar 19 23:57 workernode_map.json
[2026-03-20 04:36:33] drwx------. 5 boincer umatlas      4096 Mar 19 23:57 pilot3
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas      6946 Mar 20 04:27 init_data.xml
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas 201140892 Mar 20 04:34 HITS.48967102._000560.pool.root.1
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas       530 Mar 20 04:34 boinc_task_state.xml
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas      1044 Mar 20 04:35 memory_monitor_summary.json
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas   1511579 Mar 20 04:35 agis_ddmendpoints.agis.ALL.json
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas    465642 Mar 20 04:35 log.48967102._000560.job.log.tgz.1
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas      6331 Mar 20 04:35 heartbeat.json
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas        95 Mar 20 04:35 pilot_heartbeat.json
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas      8192 Mar 20 04:36 boinc_mmap_file
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas        28 Mar 20 04:36 wrapper_checkpoint.txt
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas      5005 Mar 20 04:36 pilotlog.txt
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas   1938311 Mar 20 04:36 log.48967102._000560.job.log.1
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas       357 Mar 20 04:36 output.list
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas       620 Mar 20 04:36 runtime_log
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas   2416640 Mar 20 04:36 result.tar.gz
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas       658 Mar 20 04:36 vkfLDmG9hK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBKlLDma2CrSo.diag
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas      9337 Mar 20 04:36 runtime_log.err
[2026-03-20 04:36:33] -rw-r--r--. 1 boincer umatlas     21244 Mar 20 04:36 stderr.txt
[2026-03-20 04:36:33] HITS file was successfully produced:
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas 201140892 Mar 20 04:34 shared/HITS.pool.root.1
[2026-03-20 04:36:33]  *** Contents of shared directory: ***
[2026-03-20 04:36:33] total 406160
[2026-03-20 04:36:33] -rw-r--r--. 2 boincer umatlas 211730392 Mar 19 23:57 ATLAS.root_0
[2026-03-20 04:36:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 23:57 start_atlas.sh
[2026-03-20 04:36:33] -rw-r--r--. 2 boincer umatlas    597518 Mar 19 23:57 input.tar.gz
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas 201140892 Mar 20 04:34 HITS.pool.root.1
[2026-03-20 04:36:33] -rw-------. 1 boincer umatlas   2416640 Mar 20 04:36 result.tar.gz
04:36:35 (844859): run_atlas exited; CPU time 38333.108953
04:36:35 (844859): called boinc_finish(0)

</stderr_txt>
]]>

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