Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-20 15:36:33 (4788): vboxwrapper version 26210
2026-03-20 15:36:33 (4788): BOINC client version: 8.0.2
2026-03-20 15:36:34 (4788): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2026-03-20 15:36:34 (4788): Successfully copied 'init_data.xml' to the shared directory.
2026-03-20 15:36:34 (4788): Create VM. (boinc_3ad77f8fd332c895, slot#7)
2026-03-20 15:36:35 (4788): Setting Memory Size for VM. (4700MB)
2026-03-20 15:36:35 (4788): Setting CPU Count for VM. (7)
2026-03-20 15:36:35 (4788): Setting Chipset Options for VM.
2026-03-20 15:36:36 (4788): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-20 15:36:36 (4788): Setting Boot Options for VM.
2026-03-20 15:36:36 (4788): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-20 15:36:37 (4788): Enabling VM Network Access.
2026-03-20 15:36:37 (4788): Disabling USB Support for VM.
2026-03-20 15:36:37 (4788): Disabling COM Port Support for VM.
2026-03-20 15:36:37 (4788): Disabling LPT Port Support for VM.
2026-03-20 15:36:38 (4788): Disabling Audio Support for VM.
2026-03-20 15:36:39 (4788): Disabling Clipboard Support for VM.
2026-03-20 15:36:39 (4788): Disabling Drag and Drop Support for VM.
2026-03-20 15:36:39 (4788): Adding storage controller(s) to VM.
2026-03-20 15:36:39 (4788): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-20 15:36:40 (4788): Adding VirtualBox Guest Additions to VM.
2026-03-20 15:36:40 (4788): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-20 15:36:40 (4788): forwarding host port 53536 to guest port 80
2026-03-20 15:36:41 (4788): Enabling remote desktop for VM.
2026-03-20 15:36:41 (4788): Required extension pack not installed, remote desktop not enabled.
2026-03-20 15:36:41 (4788): Enabling shared directory for VM.
2026-03-20 15:36:41 (4788): Starting VM using VBoxManage interface. (boinc_3ad77f8fd332c895, slot#7)
2026-03-20 15:36:45 (4788): Successfully started VM. (PID = '12200')
2026-03-20 15:36:45 (4788): Reporting VM Process ID to BOINC.
2026-03-20 15:36:45 (4788): Guest Log: BIOS: VirtualBox 6.1.50
2026-03-20 15:36:45 (4788): Guest Log: CPUID EDX: 0x178bfbff
2026-03-20 15:36:45 (4788): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-20 15:36:45 (4788): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-20 15:36:45 (4788): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-20 15:36:45 (4788): Detected: Web Application Enabled (http://localhost:53536)
2026-03-20 15:36:45 (4788): Preference change detected
2026-03-20 15:36:45 (4788): Setting CPU throttle for VM. (100%)
2026-03-20 15:36:45 (4788): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-20 15:36:47 (4788): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-20 15:36:47 (4788): Guest Log: BIOS: Booting from Hard Disk...
2026-03-20 15:36:50 (4788): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-20 15:36:50 (4788): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-20 15:36:50 (4788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-20 15:37:31 (4788): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-20 15:37:31 (4788): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-20 15:37:36 (4788): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000091 main     Log opened 2026-03-20T15:37:39.614794000Z
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000154 main     OS Product: Linux
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000212 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000243 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000259 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000259 main     Process ID: 1355
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000260 main     Package type: LINUX_64BITS_GENERIC
2026-03-20 15:37:36 (4788): Guest Log: 00:00:00.000931 main     5.2.32 r132073 started. Verbose level = 0
2026-03-20 15:37:36 (4788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-20 15:37:36 (4788): Guest Log: [INFO] Mounting shared directory
2026-03-20 15:37:36 (4788): Guest Log: [INFO] Checking for init_data.xml
2026-03-20 15:37:41 (4788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-20 15:37:41 (4788): Guest Log: [INFO] Detected branch: prod
2026-03-20 15:37:41 (4788): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-20 15:37:41 (4788): Guest Log: Copying input files
2026-03-20 15:37:42 (4788): Guest Log: Copied input files into RunAtlas.
2026-03-20 15:37:42 (4788): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-20 15:37:42 (4788): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-20 15:37:42 (4788): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-20 15:37:42 (4788): Guest Log: Further information can be found at the LHC@home message board.
2026-03-20 15:37:45 (4788): Guest Log: 00:00:10.039582 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 633 265 855 000ns (GuestNow=1 774 017 426 350 687 000 ns GuestLast=1 774 021 059 616 542 000 ns fSetTimeLastLoop=true )
2026-03-20 15:37:49 (4788): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-20 15:37:49 (4788): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-20 15:37:49 (4788): Guest Log: 2.6.3.0 1632 0 32164 157504 4 1 3117744 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-20 15:37:50 (4788): Guest Log: copied the webapp to /var/www
2026-03-20 15:37:50 (4788): Guest Log: ATHENA_PROC_NUMBER=7
2026-03-20 15:37:50 (4788): Guest Log: ATHENA_CORE_NUMBER=7
2026-03-20 15:37:50 (4788): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-20 15:37:50 (4788): Guest Log:  *** Starting ATLAS job. (PandaID=7050362591 taskID=48967067) ***
2026-03-20 17:16:47 (4788): Status Report: Elapsed Time: '6000.000000'
2026-03-20 17:16:47 (4788): Status Report: CPU Time: '38151.031250'
2026-03-20 18:30:30 (4788): Guest Log:  *** Job finished ***
2026-03-20 18:30:30 (4788): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:25,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:25,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:34,923 | INFO     | [monitor] cgroup control has ended
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:35,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943881279296)>', '<ExcThread(monitor, started 139942835508992)>']
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:35,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:35,923 | INFO     | [monitor] control thread has ended
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,709 | INFO     | all workflow threads have been joined
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,709 | INFO     | end of generic workflow (traces error code: 0)
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,709 | INFO     | traces error code: 0
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,819 [wrapper] ==== pilot stdout END ====
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,824 [wrapper] ==== wrapper stdout RESUME ====
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,829 [wrapper] pilotpid: 6057
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,835 [wrapper] Pilot exit status: 0
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,899 [wrapper] pandaids: 7050362591
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,931 [wrapper] cleanup supervisor_pilot 27271 6058
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,936 [wrapper] Test setup, not cleaning
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,941 [wrapper] apfmon messages muted
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,945 [wrapper] ==== wrapper stdout END ====
2026-03-20 18:30:30 (4788): Guest Log: 2026-03-20 17:46:40,950 [wrapper] ==== wrapper stderr END ====
2026-03-20 18:30:30 (4788): Guest Log:  *** Error codes and diagnostics ***
2026-03-20 18:30:30 (4788): Guest Log:     "exeErrorCode": 0,
2026-03-20 18:30:30 (4788): Guest Log:     "exeErrorDiag": "",
2026-03-20 18:30:30 (4788): Guest Log:     "pilotErrorCode": 0,
2026-03-20 18:30:30 (4788): Guest Log:     "pilotErrorDiag": "",
2026-03-20 18:30:30 (4788): Guest Log:  *** Listing of results directory ***
2026-03-20 18:30:30 (4788): Guest Log: total 276248
2026-03-20 18:30:30 (4788): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 11 21:07 pilot3.tar.gz
2026-03-20 18:30:30 (4788): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 11 21:10 runpilot2-wrapper.sh
2026-03-20 18:30:30 (4788): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 11 21:11 queuedata.json
2026-03-20 18:30:30 (4788): Guest Log: -rwxr-xr-x. 1 atlas atlas      9130 Mar 20 14:37 init_data.xml
2026-03-20 18:30:30 (4788): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 20 14:37 start_atlas.sh
2026-03-20 18:30:30 (4788): Guest Log: -rwxr-xr-x. 1 atlas atlas    597549 Mar 20 14:37 input.tar.gz
2026-03-20 18:30:30 (4788): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 20 14:37 EVNT.48967065._000066.pool.root.1 -> /data/./ATLAS.root_0
2026-03-20 18:30:30 (4788): Guest Log: -rw-r--r--. 1 atlas atlas      2614 Mar 20 14:37 pandaJob.out
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas   1010663 Mar 20 14:38 agis_schedconf.cvmfs.json
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas       422 Mar 20 14:38 workernode_map.json
2026-03-20 18:30:30 (4788): Guest Log: drwx------. 5 atlas atlas      4096 Mar 20 14:38 pilot3
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas 275070925 Mar 20 17:45 HITS.48967067._001642.pool.root.1
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas      1041 Mar 20 17:45 memory_monitor_summary.json
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas        95 Mar 20 17:45 pilot_heartbeat.json
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 20 17:45 agis_ddmendpoints.agis.ALL.json
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas    395934 Mar 20 17:45 log.48967067._001642.job.log.tgz.1
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas      6338 Mar 20 17:45 heartbeat.json
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 20 17:46 pilotlog.txt
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas   1575845 Mar 20 17:46 log.48967067._001642.job.log.1
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas       357 Mar 20 17:46 output.list
2026-03-20 18:30:30 (4788): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 20 17:46 runtime_log
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas   1986560 Mar 20 17:46 result.tar.gz
2026-03-20 18:30:30 (4788): Guest Log: -rw-r--r--. 1 atlas atlas      8743 Mar 20 17:46 runtime_log.err
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas       655 Mar 20 17:46 6VINDmmzfK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmK8kLDmyMUtyn.diag
2026-03-20 18:30:30 (4788): Guest Log: Looking for outputfile HITS.48967067._001642.pool.root.1
2026-03-20 18:30:30 (4788): Guest Log: HITS file was successfully produced
2026-03-20 18:30:30 (4788): Guest Log: -rw-------. 1 atlas atlas 275070925 Mar 20 17:45 /home/atlas/RunAtlas/HITS.48967067._001642.pool.root.1
2026-03-20 18:30:31 (4788): Guest Log: Successfully finished the ATLAS job!
2026-03-20 18:30:31 (4788): Guest Log: Copying the results back to the shared directory!
2026-03-20 18:30:31 (4788): Guest Log:  *** Contents of shared directory: ***
2026-03-20 18:30:31 (4788): Guest Log: total 501288
2026-03-20 18:30:31 (4788): Guest Log: -rwxrwxrwx. 1 root root 235630736 Mar 20 14:36 ATLAS.root_0
2026-03-20 18:30:31 (4788): Guest Log: -rwxrwxrwx. 1 root root 275070925 Mar 20 17:30 HITS.pool.root.1
2026-03-20 18:30:31 (4788): Guest Log: -rwxrwxrwx. 1 root root      9130 Mar 20 14:36 init_data.xml
2026-03-20 18:30:31 (4788): Guest Log: -rwxrwxrwx. 1 root root    597549 Mar 20 02:53 input.tar.gz
2026-03-20 18:30:31 (4788): Guest Log: -rwxrwxrwx. 1 root root   1986560 Mar 20 17:30 result.tar.gz
2026-03-20 18:30:31 (4788): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 20 02:53 start_atlas.sh
2026-03-20 18:30:31 (4788): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-20 18:30:31 (4788): VM Completion File Detected.
2026-03-20 18:30:31 (4788): Powering off VM.
2026-03-20 18:30:32 (4788): Successfully stopped VM.
2026-03-20 18:30:32 (4788): Deregistering VM. (boinc_3ad77f8fd332c895, slot#7)
2026-03-20 18:30:32 (4788): Removing network bandwidth throttle group from VM.
2026-03-20 18:30:32 (4788): Removing VM from VirtualBox.
2026-03-20 18:30:37 (4788): called boinc_finish(0)

</stderr_txt>
]]>

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