Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:25:19 (235159): wrapper (7.7.26015): starting
21:25:19 (235159): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 21:25:19] Arguments: --nthreads 8
[2026-03-19 21:25:19] Threads: 8
[2026-03-19 21:25:19] Checking for CVMFS
[2026-03-19 21:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 21:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 21:25:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 21:25:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 21:25:20] 2.13.3.0 17575 3385 268884 157479 0 521 24106318 32935937 39238 16776704 0 34362541 99.611 31762078 38312 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 21:25:20] CVMFS is ok
[2026-03-19 21:25:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 21:25:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 21:25:20] Further information can be found at the LHC@home message board.
[2026-03-19 21:25:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 21:25:20] Checking for apptainer binary...
[2026-03-19 21:25:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 21:25:20] Running /usr/bin/apptainer --version
[2026-03-19 21:25:21] apptainer version 1.4.5-3.el9
[2026-03-19 21:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 21:25:21] c7-9-14.aglt2.org
[2026-03-19 21:25:21] apptainer works
[2026-03-19 21:25:21] Set ATHENA_PROC_NUMBER=8
[2026-03-19 21:25:21] Set ATHENA_CORE_NUMBER=8
[2026-03-19 21:25:21] Starting ATLAS job with PandaID=7050205397
[2026-03-19 21:25:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 23:05:36]  *** The last 200 lines of the pilot log: ***
[2026-03-19 23:05:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-19 23:05:36]  is_altstaged=None
[2026-03-19 23:05:36]  is_tar=False
[2026-03-19 23:05:36]  lfn=log.48967094._004553.job.log.tgz.1
[2026-03-19 23:05:36]  mtime=0
[2026-03-19 23:05:36]  protocol_id=None
[2026-03-19 23:05:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 23:05:36]  replicas=None
[2026-03-19 23:05:36]  scope=mc23_13p6TeV
[2026-03-19 23:05:36]  status=None
[2026-03-19 23:05:36]  status_code=0
[2026-03-19 23:05:36]  storage_token=
[2026-03-19 23:05:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7050205397/log.48967094._004553.job.log.tgz.1
[2026-03-19 23:05:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/bc/log.48967094._004553.job.log.tgz.1
[2026-03-19 23:05:36]  workdir=None
[2026-03-19 23:05:36] ]
[2026-03-19 23:05:36] 2026-03-20 03:04:48,239 | INFO     | transferring file log.48967094._004553.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7050205397/log.48967094._004553.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-19 23:05:36] 2026-03-20 03:04:48,240 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7050205397/log.48967094._004553.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967094._004553.job
[2026-03-19 23:05:36] 2026-03-20 03:04:48,258 | INFO     | adding to output.list: log.48967094._004553.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/bc/log.48967094._004553.job.log.tg
[2026-03-19 23:05:36] 2026-03-20 03:04:48,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 23:05:36] 2026-03-20 03:04:48,259 | INFO     | summary of transferred files:
[2026-03-19 23:05:36] 2026-03-20 03:04:48,259 | INFO     |  -- lfn=log.48967094._004553.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 23:05:36] 2026-03-20 03:04:48,259 | INFO     | stage-out finished correctly
[2026-03-19 23:05:36] 2026-03-20 03:04:49,922 | INFO     | time since job start (5909s) is within the limit (345600.0s)
[2026-03-19 23:05:36] 2026-03-20 03:04:50,892 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 23:05:36] 2026-03-20 03:04:51,925 | INFO     | job 7050205397 has state=finished
[2026-03-19 23:05:36] 2026-03-20 03:04:51,925 | INFO     | preparing for final server update for job 7050205397 in state='finished'
[2026-03-19 23:05:36] 2026-03-20 03:04:51,926 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7050205397/jobReport.json
[2026-03-19 23:05:36] 2026-03-20 03:04:51,928 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-19 23:05:36] 2026-03-20 03:04:51,928 | INFO     | this job has now completed (state=finished)
[2026-03-19 23:05:36] 2026-03-20 03:04:51,928 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 23:05:36] 2026-03-20 03:04:51,928 | INFO     | log transfer has been attempted: DONE
[2026-03-19 23:05:36] 2026-03-20 03:04:51,928 | INFO     | job 7050205397 has finished - writing final server update
[2026-03-19 23:05:36] 2026-03-20 03:04:51,928 | INFO     | total number of processed events: 400 (read)
[2026-03-19 23:05:36] 2026-03-20 03:04:51,933 | INFO     | time since job start (5911s) is within the limit (345600.0s)
[2026-03-19 23:05:36] 2026-03-20 03:04:51,943 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050205397/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 23:05:36] 2026-03-20 03:04:51,944 | INFO     | extracted standard info from prmon json
[2026-03-19 23:05:36] 2026-03-20 03:04:51,944 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 23:05:36] 2026-03-20 03:04:51,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 23:05:36] 2026-03-20 03:04:51,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 23:05:36] 2026-03-20 03:04:51,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | fitting pss+swap vs Time
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | sum of square deviations: 218571540.0
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | sum of deviations: -22631261446.0
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | mean x: 1773973042.0
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | mean y: 2785887.6404494382
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | intersect: 183682910535.42368
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | chi2: 0.13474964318865393
[2026-03-19 23:05:36] 2026-03-20 03:04:51,946 | INFO     | current memory leak: -103.54 B/s (using 89 data points, chi2=0.13)
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | could have reported an average CPU frequency of 3798 MHz (7 samples)
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | ..............................
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . Timing measurements:
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . get job = 0 s
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . initial setup = 25 s
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . payload setup = 42 s
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . stage-in = 0 s
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . payload execution = 5849 s
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . stage-out = 0 s
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | . log creation = 0 s
[2026-03-19 23:05:36] 2026-03-20 03:04:51,947 | INFO     | ..............................
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | 
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | job summary report
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | --------------------------------------------------
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | PanDA job id: 7050205397
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | task id: 48967094
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | errors: (none)
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | pilot state: finished 
[2026-03-19 23:05:36] 2026-03-20 03:04:52,003 | INFO     | transexitcode: 0
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | exeerrorcode: 0
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | exeerrordiag: 
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | exitcode: 0
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | exitmsg: OK
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | cpuconsumptiontime: 29482 s
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | nevents: 400
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | neventsw: 0
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | pid: 250766
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | pgrp: 250766
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | corecount: 8
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | event service: False
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | sizes: {0: 2280014, 1: 2280248, 11: 2280248, 5895: 2307106, 5897: 2316104, 5899: 2316160, 5900: 2316482}
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | --------------------------------------------------
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | 
[2026-03-19 23:05:36] 2026-03-20 03:04:52,004 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 23:05:36] 2026-03-20 03:04:52,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 23:05:36] 2026-03-20 03:04:52,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 23:05:36] 2026-03-20 03:04:52,027 | INFO     | job 7050205397 has completed (purged errors)
[2026-03-19 23:05:36] 2026-03-20 03:04:52,027 | INFO     | overall cleanup function is called
[2026-03-19 23:05:36] 2026-03-20 03:04:53,035 | INFO     | --- collectZombieJob: --- 10, [250766]
[2026-03-19 23:05:36] 2026-03-20 03:04:53,035 | INFO     | zombie collector waiting for pid 250766
[2026-03-19 23:05:36] 2026-03-20 03:04:53,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 23:05:36] 2026-03-20 03:04:53,036 | INFO     | collected zombie processes
[2026-03-19 23:05:36] 2026-03-20 03:04:53,036 | INFO     | will attempt to kill all subprocesses of pid=250766
[2026-03-19 23:05:36] 2026-03-20 03:04:53,479 | WARNING  | process 250766 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 23:05:36] 2026-03-20 03:04:54,041 | INFO     | process IDs to be killed: [250766] (in reverse order)
[2026-03-19 23:05:36] 2026-03-20 03:04:54,186 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 23:05:36] 2026-03-20 03:04:54,228 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 23:05:36] 2026-03-20 03:04:54,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 23:05:36] 2026-03-20 03:04:54,291 | INFO     | did not find any defunct processes belonging to 250766
[2026-03-19 23:05:36] 2026-03-20 03:04:54,354 | INFO     | did not find any defunct processes belonging to 250766
[2026-03-19 23:05:36] 2026-03-20 03:04:54,355 | INFO     | ready for new job
[2026-03-19 23:05:36] 2026-03-20 03:04:54,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 23:05:36] 2026-03-20 03:04:54,356 | INFO     | **************************************
[2026-03-19 23:05:36] 2026-03-20 03:04:54,356 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 23:05:36] 2026-03-20 03:04:54,357 | INFO     | **************************************
[2026-03-19 23:05:36] 2026-03-20 03:04:54,357 | INFO     | 
[2026-03-19 23:05:36] 2026-03-20 03:04:54,363 | INFO     | architecture information:
[2026-03-19 23:05:36] 2026-03-20 03:04:54,364 | INFO     | executing command: cat /etc/os-release
[2026-03-19 23:05:36] 2026-03-20 03:04:54,382 | INFO     | cat /etc/os-release:
[2026-03-19 23:05:36] NAME="CentOS Linux"
[2026-03-19 23:05:36] VERSION="7 (Core)"
[2026-03-19 23:05:36] ID="centos"
[2026-03-19 23:05:36] ID_LIKE="rhel fedora"
[2026-03-19 23:05:36] VERSION_ID="7"
[2026-03-19 23:05:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 23:05:36] ANSI_COLOR="0;31"
[2026-03-19 23:05:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 23:05:36] HOME_URL="https://www.centos.org/"
[2026-03-19 23:05:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 23:05:36] 
[2026-03-19 23:05:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 23:05:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 23:05:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 23:05:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 23:05:36] 
[2026-03-19 23:05:36] 2026-03-20 03:04:54,382 | INFO     | **************************************
[2026-03-19 23:05:36] 2026-03-20 03:04:54,693 | INFO     | number of running child processes to parent process 250766: 1
[2026-03-19 23:05:36] 2026-03-20 03:04:54,693 | INFO     | maximum number of monitored processes: 6
[2026-03-19 23:05:36] 2026-03-20 03:04:54,693 | INFO     | aborting job monitoring since job object (job id=7050205397) has expired
[2026-03-19 23:05:36] 2026-03-20 03:04:54,885 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 23:05:36] 2026-03-20 03:04:54,902 | INFO     | sufficient remaining disk space (76057411584 B)
[2026-03-19 23:05:36] 2026-03-20 03:04:54,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 23:05:36] 2026-03-20 03:04:54,903 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 23:05:36] 2026-03-20 03:04:54,903 | INFO     | update_server=False
[2026-03-19 23:05:36] 2026-03-20 03:04:54,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 23:05:36] 2026-03-20 03:04:54,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 23:05:36] 2026-03-20 03:04:54,903 | INFO     | will abort loop
[2026-03-19 23:05:36] 2026-03-20 03:04:55,212 | INFO     | all payload control threads have been joined
[2026-03-19 23:05:36] 2026-03-20 03:04:55,418 | INFO     | all job control threads have been joined
[2026-03-19 23:05:36] 2026-03-20 03:04:55,908 | INFO     | [job] retrieve thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:55,908 | INFO     | [job] job monitor thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:55,956 | INFO     | all data control threads have been joined
[2026-03-19 23:05:36] 2026-03-20 03:04:56,218 | INFO     | [payload] control thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,300 | INFO     | [data] copytool_in thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,321 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 23:05:36] 2026-03-20 03:04:56,422 | INFO     | [job] control thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,456 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,721 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,830 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,842 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,864 | INFO     | [job] validate thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:56,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 23:05:36] 2026-03-20 03:04:56,961 | INFO     | [data] control thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:57,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 23:05:36] 2026-03-20 03:04:57,371 | INFO     | [payload] validate_post thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:57,378 | INFO     | [payload] failed_post thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:58,019 | INFO     | [job] queue monitor thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:04:58,328 | INFO     | [data] copytool_out thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:05:00,952 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 23:05:36] 2026-03-20 03:05:25,575 | INFO     | PID=240388 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-19 23:05:36] 2026-03-20 03:05:25,575 | INFO     | .. there are 57 such processes running
[2026-03-19 23:05:36] 2026-03-20 03:05:25,575 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 23:05:36] 2026-03-20 03:05:25,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 23:05:36] 2026-03-20 03:05:25,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 23:05:36] 2026-03-20 03:05:30,193 | INFO     | [monitor] cgroup control has ended
[2026-03-19 23:05:36] 2026-03-20 03:05:31,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134440789824)>', '<ExcThread(monitor, started 140134078985984)>']
[2026-03-19 23:05:36] 2026-03-20 03:05:31,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 23:05:36] 2026-03-20 03:05:31,610 | INFO     | [monitor] control thread has ended
[2026-03-19 23:05:36] 2026-03-20 03:05:36,486 | INFO     | all workflow threads have been joined
[2026-03-19 23:05:36] 2026-03-20 03:05:36,487 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 23:05:36] 2026-03-20 03:05:36,492 | INFO     | traces error code: 0
[2026-03-19 23:05:36] 2026-03-20 03:05:36,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 23:05:36] 2026-03-20 03:05:36,668 [wrapper] ==== pilot stdout END ====
[2026-03-19 23:05:36] 2026-03-20 03:05:36,672 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 23:05:36] 2026-03-20 03:05:36,674 [wrapper] pilotpid: 240388
[2026-03-19 23:05:36] 2026-03-20 03:05:36,679 [wrapper] Pilot exit status: 0
[2026-03-19 23:05:36] 2026-03-20 03:05:36,712 [wrapper] pandaids: 7050205397
[2026-03-19 23:05:36] 2026-03-20 03:05:36,854 [wrapper] cleanup supervisor_pilot  725166 240389
[2026-03-19 23:05:36] 2026-03-20 03:05:36,857 [wrapper] Test setup, not cleaning
[2026-03-19 23:05:36] 2026-03-20 03:05:36,860 [wrapper] apfmon messages muted
[2026-03-19 23:05:36] 2026-03-20 03:05:36,862 [wrapper] ==== wrapper stdout END ====
[2026-03-19 23:05:36] 2026-03-20 03:05:36,865 [wrapper] ==== wrapper stderr END ====
[2026-03-19 23:05:36]  *** Error codes and diagnostics ***
[2026-03-19 23:05:36]     "exeErrorCode": 0,
[2026-03-19 23:05:36]     "exeErrorDiag": "",
[2026-03-19 23:05:36]     "pilotErrorCode": 0,
[2026-03-19 23:05:36]     "pilotErrorDiag": "",
[2026-03-19 23:05:36]  *** Listing of results directory ***
[2026-03-19 23:05:36] total 426388
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 15:56 pilot3.tar.gz
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 16:41 queuedata.json
[2026-03-19 23:05:36] -rwx------. 1 boincer umatlas     36322 Mar 11 16:42 runpilot2-wrapper.sh
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas       100 Mar 19 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 23:05:36] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 21:25 run_atlas
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas       105 Mar 19 21:25 job.xml
[2026-03-19 23:05:36] -rw-r--r--. 2 boincer umatlas 218650903 Mar 19 21:25 EVNT.48967092._000061.pool.root.1
[2026-03-19 23:05:36] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 21:25 start_atlas.sh
[2026-03-19 23:05:36] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 21:25 shared
[2026-03-19 23:05:36] -rw-r--r--. 2 boincer umatlas    597524 Mar 19 21:25 input.tar.gz
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas         0 Mar 19 21:25 boinc_lockfile
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas      2595 Mar 19 21:25 pandaJob.out
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas        57 Mar 19 21:25 setup.sh.local
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas   1010740 Mar 19 21:25 agis_schedconf.cvmfs.json
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas   1511579 Mar 19 21:25 agis_ddmendpoints.agis.ALL.json
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas       428 Mar 19 21:26 workernode_map.json
[2026-03-19 23:05:36] drwx------. 5 boincer umatlas      4096 Mar 19 21:26 pilot3
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas      7179 Mar 19 23:01 init_data.xml
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas 211730603 Mar 19 23:04 HITS.48967094._004553.pool.root.1
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas       529 Mar 19 23:04 boinc_task_state.xml
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas        95 Mar 19 23:04 pilot_heartbeat.json
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas      1035 Mar 19 23:04 memory_monitor_summary.json
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas    331541 Mar 19 23:04 log.48967094._004553.job.log.tgz.1
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas      6331 Mar 19 23:04 heartbeat.json
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas      8192 Mar 19 23:05 boinc_mmap_file
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas        27 Mar 19 23:05 wrapper_checkpoint.txt
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas      5108 Mar 19 23:05 pilotlog.txt
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas    815290 Mar 19 23:05 log.48967094._004553.job.log.1
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas       357 Mar 19 23:05 output.list
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas       620 Mar 19 23:05 runtime_log
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas   1167360 Mar 19 23:05 result.tar.gz
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas       652 Mar 19 23:05 x8FODmTZfK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmX0kLDmi8shqm.diag
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas      9336 Mar 19 23:05 runtime_log.err
[2026-03-19 23:05:36] -rw-r--r--. 1 boincer umatlas     21448 Mar 19 23:05 stderr.txt
[2026-03-19 23:05:36] HITS file was successfully produced:
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas 211730603 Mar 19 23:04 shared/HITS.pool.root.1
[2026-03-19 23:05:36]  *** Contents of shared directory: ***
[2026-03-19 23:05:36] total 422044
[2026-03-19 23:05:36] -rw-r--r--. 2 boincer umatlas 218650903 Mar 19 21:25 ATLAS.root_0
[2026-03-19 23:05:36] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 21:25 start_atlas.sh
[2026-03-19 23:05:36] -rw-r--r--. 2 boincer umatlas    597524 Mar 19 21:25 input.tar.gz
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas 211730603 Mar 19 23:04 HITS.pool.root.1
[2026-03-19 23:05:36] -rw-------. 1 boincer umatlas   1167360 Mar 19 23:05 result.tar.gz
23:05:38 (235159): run_atlas exited; CPU time 29695.060824
23:05:38 (235159): called boinc_finish(0)

</stderr_txt>
]]>

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