Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:44:01 (378703): wrapper (7.7.26015): starting
19:44:01 (378703): wrapper: running run_atlas (--nthreads 9)
[2026-03-19 19:44:01] Arguments: --nthreads 9
[2026-03-19 19:44:01] Threads: 9
[2026-03-19 19:44:01] Checking for CVMFS
[2026-03-19 19:44:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 19:44:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 19:44:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 19:44:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 19:44:02] 2.13.3.0 2295398 116916 121056 157477 2 1 33777181 37030913 0 16776704 0 95201588 99.980 5235506 26559 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-19 19:44:02] CVMFS is ok
[2026-03-19 19:44:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 19:44:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 19:44:02] Further information can be found at the LHC@home message board.
[2026-03-19 19:44:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 19:44:02] Checking for apptainer binary...
[2026-03-19 19:44:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 19:44:02] Running /usr/bin/apptainer --version
[2026-03-19 19:44:02] apptainer version 1.4.5-2.el9
[2026-03-19 19:44:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 19:44:02] c-205-36.aglt2.org
[2026-03-19 19:44:02] apptainer works
[2026-03-19 19:44:02] Set ATHENA_PROC_NUMBER=9
[2026-03-19 19:44:02] Set ATHENA_CORE_NUMBER=9
[2026-03-19 19:44:02] Starting ATLAS job with PandaID=7050075871
[2026-03-19 19:44:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 21:00:23]  *** The last 200 lines of the pilot log: ***
[2026-03-19 21:00:23]  guid=d29835af-49b7-4657-b6aa-b7183881520f
[2026-03-19 21:00:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-19 21:00:23]  is_altstaged=None
[2026-03-19 21:00:23]  is_tar=False
[2026-03-19 21:00:23]  lfn=log.48967094._003251.job.log.tgz.1
[2026-03-19 21:00:23]  mtime=0
[2026-03-19 21:00:23]  protocol_id=None
[2026-03-19 21:00:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 21:00:23]  replicas=None
[2026-03-19 21:00:23]  scope=mc23_13p6TeV
[2026-03-19 21:00:23]  status=None
[2026-03-19 21:00:23]  status_code=0
[2026-03-19 21:00:23]  storage_token=
[2026-03-19 21:00:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7050075871/log.48967094._003251.job.log.tgz.1
[2026-03-19 21:00:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/f3/log.48967094._003251.job.log.tgz.1
[2026-03-19 21:00:23]  workdir=None
[2026-03-19 21:00:23] ]
[2026-03-19 21:00:23] 2026-03-20 00:59:28,223 | INFO     | transferring file log.48967094._003251.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7050075871/log.48967094._003251.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-19 21:00:23] 2026-03-20 00:59:28,223 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7050075871/log.48967094._003251.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967094._003251.job
[2026-03-19 21:00:23] 2026-03-20 00:59:28,233 | INFO     | adding to output.list: log.48967094._003251.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/f3/log.48967094._003251.job.log.tg
[2026-03-19 21:00:23] 2026-03-20 00:59:28,233 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 21:00:23] 2026-03-20 00:59:28,233 | INFO     | summary of transferred files:
[2026-03-19 21:00:23] 2026-03-20 00:59:28,233 | INFO     |  -- lfn=log.48967094._003251.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 21:00:23] 2026-03-20 00:59:28,234 | INFO     | stage-out finished correctly
[2026-03-19 21:00:23] 2026-03-20 00:59:30,102 | INFO     | time since job start (4518s) is within the limit (345600.0s)
[2026-03-19 21:00:23] 2026-03-20 00:59:30,271 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 21:00:23] 2026-03-20 00:59:32,026 | WARNING  | process 386856 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 21:00:23] 2026-03-20 00:59:32,026 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050075871/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,084 | INFO     | job 7050075871 has state=finished
[2026-03-19 21:00:23] 2026-03-20 00:59:32,084 | INFO     | preparing for final server update for job 7050075871 in state='finished'
[2026-03-19 21:00:23] 2026-03-20 00:59:32,084 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7050075871/jobReport.json
[2026-03-19 21:00:23] 2026-03-20 00:59:32,086 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-19 21:00:23] 2026-03-20 00:59:32,086 | INFO     | this job has now completed (state=finished)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,086 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,087 | INFO     | log transfer has been attempted: DONE
[2026-03-19 21:00:23] 2026-03-20 00:59:32,087 | INFO     | job 7050075871 has finished - writing final server update
[2026-03-19 21:00:23] 2026-03-20 00:59:32,087 | INFO     | total number of processed events: 400 (read)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,091 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050075871/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,092 | INFO     | extracted standard info from prmon json
[2026-03-19 21:00:23] 2026-03-20 00:59:32,092 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 21:00:23] 2026-03-20 00:59:32,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 21:00:23] 2026-03-20 00:59:32,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 21:00:23] 2026-03-20 00:59:32,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 21:00:23] 2026-03-20 00:59:32,093 | INFO     | fitting pss+swap vs Time
[2026-03-19 21:00:23] 2026-03-20 00:59:32,094 | INFO     | sum of square deviations: 93240818.0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,094 | INFO     | sum of deviations: -12674108836.0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,094 | INFO     | mean x: 1773966189.0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,094 | INFO     | mean y: 2784940.313432836
[2026-03-19 21:00:23] 2026-03-20 00:59:32,094 | INFO     | intersect: 241135810508.25888
[2026-03-19 21:00:23] 2026-03-20 00:59:32,094 | INFO     | chi2: 0.1090761416691707
[2026-03-19 21:00:23] 2026-03-20 00:59:32,094 | INFO     | current memory leak: -135.93 B/s (using 67 data points, chi2=0.11)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,095 | INFO     | could have reported an average CPU frequency of 2497 MHz (6 samples)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,095 | INFO     | ..............................
[2026-03-19 21:00:23] 2026-03-20 00:59:32,095 | INFO     | . Timing measurements:
[2026-03-19 21:00:23] 2026-03-20 00:59:32,095 | INFO     | . get job = 0 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,095 | INFO     | . initial setup = 4 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,095 | INFO     | . payload setup = 5 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,095 | INFO     | . stage-in = 0 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,096 | INFO     | . payload execution = 4495 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,096 | INFO     | . stage-out = 0 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,096 | INFO     | . log creation = 0 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,096 | INFO     | ..............................
[2026-03-19 21:00:23] 2026-03-20 00:59:32,112 | INFO     | time since job start (4520s) is within the limit (345600.0s)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,145 | INFO     | 
[2026-03-19 21:00:23] 2026-03-20 00:59:32,145 | INFO     | job summary report
[2026-03-19 21:00:23] 2026-03-20 00:59:32,145 | INFO     | --------------------------------------------------
[2026-03-19 21:00:23] 2026-03-20 00:59:32,145 | INFO     | PanDA job id: 7050075871
[2026-03-19 21:00:23] 2026-03-20 00:59:32,145 | INFO     | task id: 48967094
[2026-03-19 21:00:23] 2026-03-20 00:59:32,145 | INFO     | errors: (none)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,145 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | pilot state: finished 
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | transexitcode: 0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | exeerrorcode: 0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | exeerrordiag: 
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | exitcode: 0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | exitmsg: OK
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | cpuconsumptiontime: 36994 s
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | nevents: 400
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | neventsw: 0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,146 | INFO     | pid: 386856
[2026-03-19 21:00:23] 2026-03-20 00:59:32,147 | INFO     | pgrp: 386856
[2026-03-19 21:00:23] 2026-03-20 00:59:32,147 | INFO     | corecount: 9
[2026-03-19 21:00:23] 2026-03-20 00:59:32,147 | INFO     | event service: False
[2026-03-19 21:00:23] 2026-03-20 00:59:32,147 | INFO     | sizes: {0: 2280224, 11: 2280224, 4503: 2306467, 4504: 2306466, 4505: 2315520, 4507: 2315576, 4509: 2315898}
[2026-03-19 21:00:23] 2026-03-20 00:59:32,147 | INFO     | --------------------------------------------------
[2026-03-19 21:00:23] 2026-03-20 00:59:32,147 | INFO     | 
[2026-03-19 21:00:23] 2026-03-20 00:59:32,147 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 21:00:23] 2026-03-20 00:59:32,157 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,160 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 21:00:23] 2026-03-20 00:59:32,160 | INFO     | job 7050075871 has completed (purged errors)
[2026-03-19 21:00:23] 2026-03-20 00:59:32,160 | INFO     | overall cleanup function is called
[2026-03-19 21:00:23] 2026-03-20 00:59:32,192 | INFO     | number of running child processes to parent process 386856: 1
[2026-03-19 21:00:23] 2026-03-20 00:59:32,192 | INFO     | maximum number of monitored processes: 6
[2026-03-19 21:00:23] 2026-03-20 00:59:32,192 | INFO     | aborting job monitoring since job object (job id=7050075871) has expired
[2026-03-19 21:00:23] 2026-03-20 00:59:33,168 | INFO     | --- collectZombieJob: --- 10, [386856]
[2026-03-19 21:00:23] 2026-03-20 00:59:33,168 | INFO     | zombie collector waiting for pid 386856
[2026-03-19 21:00:23] 2026-03-20 00:59:33,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 21:00:23] 2026-03-20 00:59:33,168 | INFO     | collected zombie processes
[2026-03-19 21:00:23] 2026-03-20 00:59:33,168 | INFO     | will attempt to kill all subprocesses of pid=386856
[2026-03-19 21:00:23] 2026-03-20 00:59:33,268 | INFO     | process IDs to be killed: [386856] (in reverse order)
[2026-03-19 21:00:23] 2026-03-20 00:59:33,296 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 21:00:23] 2026-03-20 00:59:33,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 21:00:23] 2026-03-20 00:59:33,298 | INFO     | did not find any defunct processes belonging to 386856
[2026-03-19 21:00:23] 2026-03-20 00:59:33,301 | INFO     | did not find any defunct processes belonging to 386856
[2026-03-19 21:00:23] 2026-03-20 00:59:33,301 | INFO     | ready for new job
[2026-03-19 21:00:23] 2026-03-20 00:59:33,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 21:00:23] 2026-03-20 00:59:33,302 | INFO     | **************************************
[2026-03-19 21:00:23] 2026-03-20 00:59:33,302 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 21:00:23] 2026-03-20 00:59:33,302 | INFO     | **************************************
[2026-03-19 21:00:23] 2026-03-20 00:59:33,302 | INFO     | 
[2026-03-19 21:00:23] 2026-03-20 00:59:33,304 | INFO     | architecture information:
[2026-03-19 21:00:23] 2026-03-20 00:59:33,304 | INFO     | executing command: cat /etc/os-release
[2026-03-19 21:00:23] 2026-03-20 00:59:33,310 | INFO     | cat /etc/os-release:
[2026-03-19 21:00:23] NAME="CentOS Linux"
[2026-03-19 21:00:23] VERSION="7 (Core)"
[2026-03-19 21:00:23] ID="centos"
[2026-03-19 21:00:23] ID_LIKE="rhel fedora"
[2026-03-19 21:00:23] VERSION_ID="7"
[2026-03-19 21:00:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 21:00:23] ANSI_COLOR="0;31"
[2026-03-19 21:00:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 21:00:23] HOME_URL="https://www.centos.org/"
[2026-03-19 21:00:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 21:00:23] 
[2026-03-19 21:00:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 21:00:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 21:00:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 21:00:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 21:00:23] 
[2026-03-19 21:00:23] 2026-03-20 00:59:33,310 | INFO     | **************************************
[2026-03-19 21:00:23] 2026-03-20 00:59:33,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | INFO     | sufficient remaining disk space (42813358080 B)
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | INFO     | update_server=False
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 21:00:23] 2026-03-20 00:59:33,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 21:00:23] 2026-03-20 00:59:33,821 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 21:00:23] 2026-03-20 00:59:33,821 | INFO     | aborting loop
[2026-03-19 21:00:23] 2026-03-20 00:59:33,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 21:00:23] 2026-03-20 00:59:33,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 21:00:23] 2026-03-20 00:59:33,883 | INFO     | all payload control threads have been joined
[2026-03-19 21:00:23] 2026-03-20 00:59:34,536 | INFO     | all data control threads have been joined
[2026-03-19 21:00:23] 2026-03-20 00:59:34,825 | INFO     | [job] retrieve thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:34,826 | INFO     | [job] queue monitor thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:34,826 | INFO     | [job] job monitor thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:34,888 | INFO     | [payload] control thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:35,233 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:35,368 | INFO     | all job control threads have been joined
[2026-03-19 21:00:23] 2026-03-20 00:59:35,542 | INFO     | [data] control thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:35,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:35,780 | INFO     | [payload] validate_post thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:35,826 | INFO     | [data] copytool_out thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:35,853 | INFO     | [job] validate thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:36,020 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:36,065 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:36,287 | INFO     | [data] copytool_in thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:36,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 21:00:23] 2026-03-20 00:59:36,354 | INFO     | [payload] failed_post thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:36,374 | INFO     | [job] control thread has finished
[2026-03-19 21:00:23] 2026-03-20 00:59:40,330 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 21:00:23] 2026-03-20 01:00:17,761 | INFO     | [monitor] cgroup control has ended
[2026-03-19 21:00:23] 2026-03-20 01:00:18,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345877460800)>', '<ExcThread(monitor, started 140345304151808)>']
[2026-03-19 21:00:23] 2026-03-20 01:00:19,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 21:00:23] 2026-03-20 01:00:19,047 | INFO     | [monitor] control thread has ended
[2026-03-19 21:00:23] 2026-03-20 01:00:23,352 | INFO     | all workflow threads have been joined
[2026-03-19 21:00:23] 2026-03-20 01:00:23,352 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 21:00:23] 2026-03-20 01:00:23,352 | INFO     | traces error code: 0
[2026-03-19 21:00:23] 2026-03-20 01:00:23,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 21:00:23] 2026-03-20 01:00:23,414 [wrapper] ==== pilot stdout END ====
[2026-03-19 21:00:23] 2026-03-20 01:00:23,416 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 21:00:23] 2026-03-20 01:00:23,417 [wrapper] pilotpid: 382472
[2026-03-19 21:00:23] 2026-03-20 01:00:23,419 [wrapper] Pilot exit status: 0
[2026-03-19 21:00:23] 2026-03-20 01:00:23,425 [wrapper] pandaids: 7050075871
[2026-03-19 21:00:23] 2026-03-20 01:00:23,446 [wrapper] cleanup supervisor_pilot  431968 382473
[2026-03-19 21:00:23] 2026-03-20 01:00:23,448 [wrapper] Test setup, not cleaning
[2026-03-19 21:00:23] 2026-03-20 01:00:23,449 [wrapper] apfmon messages muted
[2026-03-19 21:00:23] 2026-03-20 01:00:23,451 [wrapper] ==== wrapper stdout END ====
[2026-03-19 21:00:23] 2026-03-20 01:00:23,452 [wrapper] ==== wrapper stderr END ====
[2026-03-19 21:00:23]  *** Error codes and diagnostics ***
[2026-03-19 21:00:23]     "exeErrorCode": 0,
[2026-03-19 21:00:23]     "exeErrorDiag": "",
[2026-03-19 21:00:23]     "pilotErrorCode": 0,
[2026-03-19 21:00:23]     "pilotErrorDiag": "",
[2026-03-19 21:00:23]  *** Listing of results directory ***
[2026-03-19 21:00:23] total 423972
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 15:14 pilot3.tar.gz
[2026-03-19 21:00:23] -rwx------. 1 boincer umatlas     36322 Mar 11 15:17 runpilot2-wrapper.sh
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 15:17 queuedata.json
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas       100 Mar 19 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 21:00:23] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 19:44 run_atlas
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas       105 Mar 19 19:44 job.xml
[2026-03-19 21:00:23] -rw-r--r--. 2 boincer umatlas 218016596 Mar 19 19:44 EVNT.48967092._000148.pool.root.1
[2026-03-19 21:00:23] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 19:44 start_atlas.sh
[2026-03-19 21:00:23] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 19:44 shared
[2026-03-19 21:00:23] -rw-r--r--. 2 boincer umatlas    597531 Mar 19 19:44 input.tar.gz
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas         0 Mar 19 19:44 boinc_lockfile
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas      2597 Mar 19 19:44 pandaJob.out
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas        57 Mar 19 19:44 setup.sh.local
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas   1010740 Mar 19 19:44 agis_schedconf.cvmfs.json
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas   1511579 Mar 19 19:44 agis_ddmendpoints.agis.ALL.json
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas       435 Mar 19 19:44 workernode_map.json
[2026-03-19 21:00:23] drwx------. 5 boincer umatlas      4096 Mar 19 19:44 pilot3
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas      6617 Mar 19 20:54 init_data.xml
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas        95 Mar 19 20:58 pilot_heartbeat.json
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas 210154802 Mar 19 20:58 HITS.48967094._003251.pool.root.1
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas       529 Mar 19 20:58 boinc_task_state.xml
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas      1029 Mar 19 20:59 memory_monitor_summary.json
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas    353986 Mar 19 20:59 log.48967094._003251.job.log.tgz.1
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas      6371 Mar 19 20:59 heartbeat.json
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas        27 Mar 19 20:59 wrapper_checkpoint.txt
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas      8192 Mar 19 20:59 boinc_mmap_file
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas      4548 Mar 19 21:00 pilotlog.txt
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas    660410 Mar 19 21:00 log.48967094._003251.job.log.1
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas       357 Mar 19 21:00 output.list
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas       620 Mar 19 21:00 runtime_log
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas   1034240 Mar 19 21:00 result.tar.gz
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas      9341 Mar 19 21:00 runtime_log.err
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas       649 Mar 19 21:00 j7LKDmaEeK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmeyhLDmUuMWyn.diag
[2026-03-19 21:00:23] -rw-r--r--. 1 boincer umatlas     21354 Mar 19 21:00 stderr.txt
[2026-03-19 21:00:23] HITS file was successfully produced:
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas 210154802 Mar 19 20:58 shared/HITS.pool.root.1
[2026-03-19 21:00:23]  *** Contents of shared directory: ***
[2026-03-19 21:00:23] total 419756
[2026-03-19 21:00:23] -rw-r--r--. 2 boincer umatlas 218016596 Mar 19 19:44 ATLAS.root_0
[2026-03-19 21:00:23] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 19:44 start_atlas.sh
[2026-03-19 21:00:23] -rw-r--r--. 2 boincer umatlas    597531 Mar 19 19:44 input.tar.gz
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas 210154802 Mar 19 20:58 HITS.pool.root.1
[2026-03-19 21:00:23] -rw-------. 1 boincer umatlas   1034240 Mar 19 21:00 result.tar.gz
21:00:25 (378703): run_atlas exited; CPU time 37034.051739
21:00:25 (378703): called boinc_finish(0)

</stderr_txt>
]]>

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