Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:13:51 (1665): wrapper (7.7.26015): starting
15:13:51 (1665): wrapper: running run_atlas (--nthreads 8)
[2026-03-20 15:13:51] Arguments: --nthreads 8
[2026-03-20 15:13:51] Threads: 8
[2026-03-20 15:13:51] Checking for CVMFS
[2026-03-20 15:13:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 15:13:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 15:13:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 15:13:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 15:13:56] 2.11.2.0 4234 136321 140164 157503 2 53 22149042 25165825 4553 130560 155 41755343 99.823 30099774 892 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-20 15:13:56] CVMFS is ok
[2026-03-20 15:13:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 15:13:56] Checking for apptainer binary...
[2026-03-20 15:13:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 15:13:56] Running /usr/bin/apptainer --version
[2026-03-20 15:13:56] apptainer version 1.3.2-1.el7
[2026-03-20 15:13:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 15:14:12] cg-vwn359.simple-grid.lan
[2026-03-20 15:14:12] apptainer works
[2026-03-20 15:14:12] Set ATHENA_PROC_NUMBER=8
[2026-03-20 15:14:12] Set ATHENA_CORE_NUMBER=8
[2026-03-20 15:14:12] Starting ATLAS job with PandaID=7050078759
[2026-03-20 15:14:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 19:55:45]  *** The last 200 lines of the pilot log: ***
[2026-03-20 19:55:45] 2026-03-20 18:55:03,973 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 19:55:45] 2026-03-20 18:55:03,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 19:55:45] 2026-03-20 18:55:03,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 19:55:45] 2026-03-20 18:55:03,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 19:55:45] 2026-03-20 18:55:03,978 | INFO     | fitting pss+swap vs Time
[2026-03-20 19:55:45] 2026-03-20 18:55:03,979 | INFO     | sum of square deviations: 6171352920.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,981 | INFO     | sum of deviations: -30893730294.99998
[2026-03-20 19:55:45] 2026-03-20 18:55:03,981 | INFO     | mean x: 1774024617.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,981 | INFO     | mean y: 2506857.6199261993
[2026-03-20 19:55:45] 2026-03-20 18:55:03,981 | INFO     | intersect: 8883256146.268393
[2026-03-20 19:55:45] 2026-03-20 18:55:03,982 | INFO     | chi2: 2.49364940011156
[2026-03-20 19:55:45] 2026-03-20 18:55:03,982 | INFO     | sum of square deviations: 5836025702.5
[2026-03-20 19:55:45] 2026-03-20 18:55:03,988 | INFO     | sum of deviations: -12299150193.000004
[2026-03-20 19:55:45] 2026-03-20 18:55:03,988 | INFO     | mean x: 1774024464.5
[2026-03-20 19:55:45] 2026-03-20 18:55:03,988 | INFO     | mean y: 2515192.2781954887
[2026-03-20 19:55:45] 2026-03-20 18:55:03,988 | INFO     | intersect: 3741188468.784709
[2026-03-20 19:55:45] 2026-03-20 18:55:03,989 | INFO     | chi2: 1.726780913851772
[2026-03-20 19:55:45] 2026-03-20 18:55:03,989 | INFO     | current chi2=1.726780913851772 (change=30.752859091798552 %)
[2026-03-20 19:55:45] 2026-03-20 18:55:03,989 | INFO     | sum of square deviations: 5513070810.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,991 | INFO     | sum of deviations: -11934217387.999998
[2026-03-20 19:55:45] 2026-03-20 18:55:03,991 | INFO     | mean x: 1774024312.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,992 | INFO     | mean y: 2515364.590038314
[2026-03-20 19:55:45] 2026-03-20 18:55:03,992 | INFO     | intersect: 3842769284.8920584
[2026-03-20 19:55:45] 2026-03-20 18:55:03,992 | INFO     | chi2: 1.7263394633625893
[2026-03-20 19:55:45] 2026-03-20 18:55:03,992 | INFO     | current chi2=1.7263394633625893 (change=0.025564939109620835 %)
[2026-03-20 19:55:45] 2026-03-20 18:55:03,992 | INFO     | right removable region: 260
[2026-03-20 19:55:45] 2026-03-20 18:55:03,993 | INFO     | sum of square deviations: 5836025702.5
[2026-03-20 19:55:45] 2026-03-20 18:55:03,995 | INFO     | sum of deviations: -71769717018.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,995 | INFO     | mean x: 1774024769.5
[2026-03-20 19:55:45] 2026-03-20 18:55:03,995 | INFO     | mean y: 2525285.210526316
[2026-03-20 19:55:45] 2026-03-20 18:55:03,995 | INFO     | intersect: 21818956908.429146
[2026-03-20 19:55:45] 2026-03-20 18:55:03,996 | INFO     | chi2: 1.0376103915350607
[2026-03-20 19:55:45] 2026-03-20 18:55:03,996 | INFO     | current chi2=1.0376103915350607 (change=58.38988466106581 %)
[2026-03-20 19:55:45] 2026-03-20 18:55:03,996 | INFO     | sum of square deviations: 5513070810.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,998 | INFO     | sum of deviations: -73727720516.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,998 | INFO     | mean x: 1774024922.0
[2026-03-20 19:55:45] 2026-03-20 18:55:03,999 | INFO     | mean y: 2526194.011494253
[2026-03-20 19:55:45] 2026-03-20 18:55:03,999 | INFO     | intersect: 23727019882.790127
[2026-03-20 19:55:45] 2026-03-20 18:55:03,999 | INFO     | chi2: 1.0154365206480924
[2026-03-20 19:55:45] 2026-03-20 18:55:03,999 | INFO     | current chi2=1.0154365206480924 (change=2.1370131860537622 %)
[2026-03-20 19:55:45] 2026-03-20 18:55:03,999 | INFO     | left removable region: 20
[2026-03-20 19:55:45] 2026-03-20 18:55:04,000 | INFO     | sum of square deviations: 4286517580.0
[2026-03-20 19:55:45] 2026-03-20 18:55:04,002 | INFO     | sum of deviations: -38107911642.999985
[2026-03-20 19:55:45] 2026-03-20 18:55:04,002 | INFO     | mean x: 1774024891.5
[2026-03-20 19:55:45] 2026-03-20 18:55:04,002 | INFO     | mean y: 2527399.433333333
[2026-03-20 19:55:45] 2026-03-20 18:55:04,002 | INFO     | intersect: 15773927505.942318
[2026-03-20 19:55:45] 2026-03-20 18:55:04,002 | INFO     | chi2: 0.200924711804778
[2026-03-20 19:55:45] 2026-03-20 18:55:04,002 | INFO     | current memory leak: -8.89 B/s (using 240 data points, chi2=0.20)
[2026-03-20 19:55:45] 2026-03-20 18:55:04,003 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-20 19:55:45] 2026-03-20 18:55:04,003 | INFO     | ..............................
[2026-03-20 19:55:45] 2026-03-20 18:55:04,003 | INFO     | . Timing measurements:
[2026-03-20 19:55:45] 2026-03-20 18:55:04,003 | INFO     | . get job = 0 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,003 | INFO     | . initial setup = 84 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,004 | INFO     | . payload setup = 20 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,004 | INFO     | . stage-in = 0 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,004 | INFO     | . payload execution = 16527 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,004 | INFO     | . stage-out = 3 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,004 | INFO     | . log creation = 1 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,004 | INFO     | ..............................
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | 
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | job summary report
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | --------------------------------------------------
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | PanDA job id: 7050078759
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | task id: 48967094
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | errors: (none)
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | pilot state: finished 
[2026-03-20 19:55:45] 2026-03-20 18:55:04,109 | INFO     | transexitcode: 0
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | exeerrorcode: 0
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | exeerrordiag: 
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | exitcode: 0
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | exitmsg: OK
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | cpuconsumptiontime: 64447 s
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | nevents: 400
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | neventsw: 0
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | pid: 10373
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | pgrp: 10373
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | corecount: 8
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | event service: False
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | sizes: {0: 2252375, 1: 2280253, 16552: 2311701, 16556: 2320895}
[2026-03-20 19:55:45] 2026-03-20 18:55:04,110 | INFO     | --------------------------------------------------
[2026-03-20 19:55:45] 2026-03-20 18:55:04,111 | INFO     | 
[2026-03-20 19:55:45] 2026-03-20 18:55:04,111 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-20 19:55:45] 2026-03-20 18:55:04,683 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,683 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,683 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,683 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,685 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 19:55:45] 2026-03-20 18:55:04,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,685 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 19:55:45] 2026-03-20 18:55:04,685 | INFO     | job 7050078759 has completed (purged errors)
[2026-03-20 19:55:45] 2026-03-20 18:55:04,685 | INFO     | overall cleanup function is called
[2026-03-20 19:55:45] 2026-03-20 18:55:05,171 | WARNING  | process 10373 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 19:55:45] 2026-03-20 18:55:05,251 | INFO     | using path: /var/lib/boinc/slots/14/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 19:55:45] 2026-03-20 18:55:05,356 | INFO     | number of running child processes to parent process 10373: 1
[2026-03-20 19:55:45] 2026-03-20 18:55:05,356 | INFO     | maximum number of monitored processes: 6
[2026-03-20 19:55:45] 2026-03-20 18:55:05,356 | INFO     | aborting job monitoring since job object (job id=7050078759) has expired
[2026-03-20 19:55:45] 2026-03-20 18:55:05,693 | INFO     | --- collectZombieJob: --- 10, [10373]
[2026-03-20 19:55:45] 2026-03-20 18:55:05,693 | INFO     | zombie collector waiting for pid 10373
[2026-03-20 19:55:45] 2026-03-20 18:55:05,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 19:55:45] 2026-03-20 18:55:05,694 | INFO     | collected zombie processes
[2026-03-20 19:55:45] 2026-03-20 18:55:05,694 | INFO     | will attempt to kill all subprocesses of pid=10373
[2026-03-20 19:55:45] 2026-03-20 18:55:05,800 | INFO     | process IDs to be killed: [10373] (in reverse order)
[2026-03-20 19:55:45] 2026-03-20 18:55:06,416 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 19:55:45] 2026-03-20 18:55:06,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 19:55:45] 2026-03-20 18:55:06,419 | INFO     | did not find any defunct processes belonging to 10373
[2026-03-20 19:55:45] 2026-03-20 18:55:06,421 | INFO     | did not find any defunct processes belonging to 10373
[2026-03-20 19:55:45] 2026-03-20 18:55:06,422 | INFO     | ready for new job
[2026-03-20 19:55:45] 2026-03-20 18:55:06,422 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 19:55:45] 2026-03-20 18:55:06,424 | INFO     | **************************************
[2026-03-20 19:55:45] 2026-03-20 18:55:06,424 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 19:55:45] 2026-03-20 18:55:06,424 | INFO     | **************************************
[2026-03-20 19:55:45] 2026-03-20 18:55:06,424 | INFO     | 
[2026-03-20 19:55:45] 2026-03-20 18:55:06,425 | INFO     | pilot is running in a VM
[2026-03-20 19:55:45] 2026-03-20 18:55:06,425 | INFO     | architecture information:
[2026-03-20 19:55:45] 2026-03-20 18:55:06,430 | INFO     | executing command: cat /etc/os-release
[2026-03-20 19:55:45] 2026-03-20 18:55:06,490 | INFO     | cat /etc/os-release:
[2026-03-20 19:55:45] NAME="CentOS Linux"
[2026-03-20 19:55:45] VERSION="7 (Core)"
[2026-03-20 19:55:45] ID="centos"
[2026-03-20 19:55:45] ID_LIKE="rhel fedora"
[2026-03-20 19:55:45] VERSION_ID="7"
[2026-03-20 19:55:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 19:55:45] ANSI_COLOR="0;31"
[2026-03-20 19:55:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 19:55:45] HOME_URL="https://www.centos.org/"
[2026-03-20 19:55:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 19:55:45] 
[2026-03-20 19:55:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 19:55:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 19:55:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 19:55:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 19:55:45] 
[2026-03-20 19:55:45] 2026-03-20 18:55:06,490 | INFO     | **************************************
[2026-03-20 19:55:45] 2026-03-20 18:55:06,993 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-20 19:55:45] 2026-03-20 18:55:07,193 | INFO     | sufficient remaining disk space (496042508288 B)
[2026-03-20 19:55:45] 2026-03-20 18:55:07,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 19:55:45] 2026-03-20 18:55:07,193 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 19:55:45] 2026-03-20 18:55:07,193 | INFO     | update_server=False
[2026-03-20 19:55:45] 2026-03-20 18:55:07,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 19:55:45] 2026-03-20 18:55:07,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 19:55:45] 2026-03-20 18:55:07,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 19:55:45] 2026-03-20 18:55:07,194 | INFO     | aborting loop
[2026-03-20 19:55:45] 2026-03-20 18:55:07,747 | INFO     | all data control threads have been joined
[2026-03-20 19:55:45] 2026-03-20 18:55:07,817 | INFO     | all job control threads have been joined
[2026-03-20 19:55:45] 2026-03-20 18:55:08,045 | INFO     | all payload control threads have been joined
[2026-03-20 19:55:45] 2026-03-20 18:55:08,199 | INFO     | [job] retrieve thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,200 | INFO     | [job] job monitor thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,274 | INFO     | [data] copytool_in thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,549 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,696 | INFO     | [payload] failed_post thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,753 | INFO     | [data] control thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,823 | INFO     | [job] control thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,835 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:08,925 | INFO     | [payload] validate_post thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:09,051 | INFO     | [payload] control thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:09,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 19:55:45] 2026-03-20 18:55:09,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:09,199 | INFO     | [data] copytool_out thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:09,538 | INFO     | [job] validate thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:09,591 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:09,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 19:55:45] 2026-03-20 18:55:10,140 | INFO     | [job] queue monitor thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:13,682 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 19:55:45] 2026-03-20 18:55:34,874 | INFO     | [monitor] cgroup control has ended
[2026-03-20 19:55:45] 2026-03-20 18:55:36,133 | INFO     | PID=5808 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-20 19:55:45] 2026-03-20 18:55:36,133 | INFO     | .. there are 9 such processes running
[2026-03-20 19:55:45] 2026-03-20 18:55:36,133 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 19:55:45] 2026-03-20 18:55:36,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 19:55:45] 2026-03-20 18:55:36,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 19:55:45] 2026-03-20 18:55:36,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837700376384)>', '<ExcThread(monitor, started 139836887398144)>']
[2026-03-20 19:55:45] 2026-03-20 18:55:37,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 19:55:45] 2026-03-20 18:55:37,139 | INFO     | [monitor] control thread has ended
[2026-03-20 19:55:45] 2026-03-20 18:55:41,569 | INFO     | all workflow threads have been joined
[2026-03-20 19:55:45] 2026-03-20 18:55:41,569 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 19:55:45] 2026-03-20 18:55:41,570 | INFO     | traces error code: 0
[2026-03-20 19:55:45] 2026-03-20 18:55:41,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 19:55:45] 2026-03-20 18:55:41,811 [wrapper] ==== pilot stdout END ====
[2026-03-20 19:55:45] 2026-03-20 18:55:41,820 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 19:55:45] 2026-03-20 18:55:41,857 [wrapper] pilotpid: 5808
[2026-03-20 19:55:45] 2026-03-20 18:55:41,915 [wrapper] Pilot exit status: 0
[2026-03-20 19:55:45] 2026-03-20 18:55:42,255 [wrapper] pandaids: 7050078759
[2026-03-20 19:55:45] 2026-03-20 18:55:42,974 [wrapper] cleanup supervisor_pilot  6207 5809
[2026-03-20 19:55:45] 2026-03-20 18:55:43,114 [wrapper] Test setup, not cleaning
[2026-03-20 19:55:45] 2026-03-20 18:55:43,206 [wrapper] apfmon messages muted
[2026-03-20 19:55:45] 2026-03-20 18:55:43,258 [wrapper] ==== wrapper stdout END ====
[2026-03-20 19:55:45] 2026-03-20 18:55:43,306 [wrapper] ==== wrapper stderr END ====
[2026-03-20 19:55:45]  *** Error codes and diagnostics ***
[2026-03-20 19:55:45]     "exeErrorCode": 0,
[2026-03-20 19:55:45]     "exeErrorDiag": "",
[2026-03-20 19:55:45]     "pilotErrorCode": 0,
[2026-03-20 19:55:45]     "pilotErrorDiag": "",
[2026-03-20 19:55:45]  *** Listing of results directory ***
[2026-03-20 19:55:45] total 427768
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc    585013 Mar 11 20:14 pilot3.tar.gz
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc      5111 Mar 11 20:14 queuedata.json
[2026-03-20 19:55:45] -rwx------. 1 boinc boinc     36322 Mar 11 20:14 runpilot2-wrapper.sh
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc       100 Mar 20 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 19:55:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 15:13 run_atlas
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc       105 Mar 20 15:13 job.xml
[2026-03-20 19:55:45] -rw-r--r--. 2 boinc boinc 219574608 Mar 20 15:13 EVNT.48967092._000168.pool.root.1
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc      6393 Mar 20 15:13 init_data.xml
[2026-03-20 19:55:45] -rw-r--r--. 2 boinc boinc     15845 Mar 20 15:13 start_atlas.sh
[2026-03-20 19:55:45] drwxrwx--x. 2 boinc boinc        68 Mar 20 15:13 shared
[2026-03-20 19:55:45] -rw-r--r--. 2 boinc boinc    597531 Mar 20 15:13 input.tar.gz
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc         0 Mar 20 15:13 boinc_lockfile
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc      2597 Mar 20 15:14 pandaJob.out
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc       415 Mar 20 15:19 workernode_map.json
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc   1010663 Mar 20 15:19 agis_schedconf.cvmfs.json
[2026-03-20 19:55:45] drwx------. 5 boinc boinc      4096 Mar 20 15:19 pilot3
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc 208931752 Mar 20 19:53 HITS.48967094._003713.pool.root.1
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc       531 Mar 20 19:54 boinc_task_state.xml
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc        95 Mar 20 19:54 pilot_heartbeat.json
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc      1015 Mar 20 19:54 memory_monitor_summary.json
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc   1511579 Mar 20 19:55 agis_ddmendpoints.agis.ALL.json
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc    491890 Mar 20 19:55 log.48967094._003713.job.log.tgz.1
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc      6314 Mar 20 19:55 heartbeat.json
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc      8192 Mar 20 19:55 boinc_mmap_file
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc        28 Mar 20 19:55 wrapper_checkpoint.txt
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc      4880 Mar 20 19:55 pilotlog.txt
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc   2307964 Mar 20 19:55 log.48967094._003713.job.log.1
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc       357 Mar 20 19:55 output.list
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc       620 Mar 20 19:55 runtime_log
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc   2816000 Mar 20 19:55 result.tar.gz
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc      8832 Mar 20 19:55 runtime_log.err
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc       656 Mar 20 19:55 86nNDmrBeK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVikLDmpSq2lm.diag
[2026-03-20 19:55:45] -rw-r--r--. 1 boinc boinc     20699 Mar 20 19:55 stderr.txt
[2026-03-20 19:55:45] HITS file was successfully produced:
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc 208931752 Mar 20 19:53 shared/HITS.pool.root.1
[2026-03-20 19:55:45]  *** Contents of shared directory: ***
[2026-03-20 19:55:45] total 421820
[2026-03-20 19:55:45] -rw-r--r--. 2 boinc boinc 219574608 Mar 20 15:13 ATLAS.root_0
[2026-03-20 19:55:45] -rw-r--r--. 2 boinc boinc     15845 Mar 20 15:13 start_atlas.sh
[2026-03-20 19:55:45] -rw-r--r--. 2 boinc boinc    597531 Mar 20 15:13 input.tar.gz
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc 208931752 Mar 20 19:53 HITS.pool.root.1
[2026-03-20 19:55:45] -rw-------. 1 boinc boinc   2816000 Mar 20 19:55 result.tar.gz
19:55:46 (1665): run_atlas exited; CPU time 64656.269834
19:55:46 (1665): called boinc_finish(0)

</stderr_txt>
]]>

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