Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:25 (2318477): wrapper (7.7.26015): starting
00:00:25 (2318477): wrapper: running run_atlas (--nthreads 8)
[2026-03-20 00:00:25] Arguments: --nthreads 8
[2026-03-20 00:00:25] Threads: 8
[2026-03-20 00:00:25] Checking for CVMFS
[2026-03-20 00:00:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 00:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 00:00:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 00:00:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 00:00:29] 2.13.3.0 9702 193704 535848 157482 2 242 18749246 32935936 22596 16776704 0 791026964 99.675 649943810 32446 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-20 00:00:29] CVMFS is ok
[2026-03-20 00:00:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 00:00:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 00:00:29] Further information can be found at the LHC@home message board.
[2026-03-20 00:00:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 00:00:29] Checking for apptainer binary...
[2026-03-20 00:00:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 00:00:29] Running /usr/bin/apptainer --version
[2026-03-20 00:00:29] apptainer version 1.4.5-2.el9
[2026-03-20 00:00:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 00:00:31] c-4-37.aglt2.org
[2026-03-20 00:00:31] apptainer works
[2026-03-20 00:00:31] Set ATHENA_PROC_NUMBER=8
[2026-03-20 00:00:31] Set ATHENA_CORE_NUMBER=8
[2026-03-20 00:00:31] Starting ATLAS job with PandaID=7050074066
[2026-03-20 00:00:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:00:08 (2318477): BOINC client no longer exists - exiting
11:00:08 (2318477): timer handler: client dead, exiting
11:13:33 (505225): wrapper (7.7.26015): starting
11:13:33 (505225): wrapper: running run_atlas (--nthreads 8)
[2026-03-20 11:13:33] Arguments: --nthreads 8
[2026-03-20 11:13:33] Threads: 8
[2026-03-20 11:13:33] This job has been restarted, cleaning up previous attempt
[2026-03-20 11:13:33] Checking for CVMFS
[2026-03-20 11:13:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 11:13:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 11:13:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 11:13:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 11:13:36] 2.13.3.0 9702 194377 533380 157505 2 81 30402134 32935937 23985 16776704 0 794102423 99.675 653259144 32449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-20 11:13:36] CVMFS is ok
[2026-03-20 11:13:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 11:13:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 11:13:36] Further information can be found at the LHC@home message board.
[2026-03-20 11:13:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 11:13:36] Checking for apptainer binary...
[2026-03-20 11:13:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 11:13:36] Running /usr/bin/apptainer --version
[2026-03-20 11:13:37] apptainer version 1.4.5-2.el9
[2026-03-20 11:13:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 11:13:38] c-4-37.aglt2.org
[2026-03-20 11:13:38] apptainer works
[2026-03-20 11:13:38] Set ATHENA_PROC_NUMBER=8
[2026-03-20 11:13:38] Set ATHENA_CORE_NUMBER=8
[2026-03-20 11:13:39] Starting ATLAS job with PandaID=7050074066
[2026-03-20 11:13:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 23:32:06]  *** The last 200 lines of the pilot log: ***
[2026-03-21 23:32:06] 2026-03-22 03:31:26,642 | INFO     | job 7050074066 has state=finished
[2026-03-21 23:32:06] 2026-03-22 03:31:26,642 | INFO     | preparing for final server update for job 7050074066 in state='finished'
[2026-03-21 23:32:06] 2026-03-22 03:31:26,642 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7050074066/jobReport.json
[2026-03-21 23:32:06] 2026-03-22 03:31:26,645 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-21 23:32:06] 2026-03-22 03:31:26,645 | INFO     | this job has now completed (state=finished)
[2026-03-21 23:32:06] 2026-03-22 03:31:26,645 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 23:32:06] 2026-03-22 03:31:26,646 | INFO     | log transfer has been attempted: DONE
[2026-03-21 23:32:06] 2026-03-22 03:31:26,646 | INFO     | job 7050074066 has finished - writing final server update
[2026-03-21 23:32:06] 2026-03-22 03:31:26,646 | INFO     | total number of processed events: 400 (read)
[2026-03-21 23:32:06] 2026-03-22 03:31:26,652 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7050074066/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 23:32:06] 2026-03-22 03:31:26,653 | INFO     | extracted standard info from prmon json
[2026-03-21 23:32:06] 2026-03-22 03:31:26,653 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 23:32:06] 2026-03-22 03:31:26,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 23:32:06] 2026-03-22 03:31:26,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-21 23:32:06] 2026-03-22 03:31:26,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-21 23:32:06] 2026-03-22 03:31:26,690 | INFO     | fitting pss+swap vs Time
[2026-03-21 23:32:06] 2026-03-22 03:31:26,693 | INFO     | sum of square deviations: 3034633797746.6226
[2026-03-21 23:32:06] 2026-03-22 03:31:26,809 | INFO     | sum of deviations: 1566908917580.507
[2026-03-21 23:32:06] 2026-03-22 03:31:26,809 | INFO     | mean x: 1774085007.402992
[2026-03-21 23:32:06] 2026-03-22 03:31:26,809 | INFO     | mean y: 2530532.2024310427
[2026-03-21 23:32:06] 2026-03-22 03:31:26,809 | INFO     | intersect: -913504088.0900735
[2026-03-21 23:32:06] 2026-03-22 03:31:26,812 | INFO     | chi2: 3.749681889752463
[2026-03-21 23:32:06] 2026-03-22 03:31:26,815 | INFO     | sum of square deviations: 3013402676406.1113
[2026-03-21 23:32:06] 2026-03-22 03:31:26,931 | INFO     | sum of deviations: 1709740794093.209
[2026-03-21 23:32:06] 2026-03-22 03:31:26,931 | INFO     | mean x: 1774084854.9034677
[2026-03-21 23:32:06] 2026-03-22 03:31:26,932 | INFO     | mean y: 2531556.1466729147
[2026-03-21 23:32:06] 2026-03-22 03:31:26,932 | INFO     | intersect: -1004046579.7129925
[2026-03-21 23:32:06] 2026-03-22 03:31:26,934 | INFO     | chi2: 2.952074147905181
[2026-03-21 23:32:06] 2026-03-22 03:31:26,935 | INFO     | current chi2=2.952074147905181 (change=21.271344217947416 %)
[2026-03-21 23:32:06] 2026-03-22 03:31:26,935 | INFO     | right removable region: 2133
[2026-03-21 23:32:06] 2026-03-22 03:31:26,937 | INFO     | sum of square deviations: 3013402280943.3105
[2026-03-21 23:32:06] 2026-03-22 03:31:27,090 | INFO     | sum of deviations: 1013461798016.3013
[2026-03-21 23:32:06] 2026-03-22 03:31:27,090 | INFO     | mean x: 1774085159.9039364
[2026-03-21 23:32:06] 2026-03-22 03:31:27,091 | INFO     | mean y: 2534505.4404873475
[2026-03-21 23:32:06] 2026-03-22 03:31:27,091 | INFO     | intersect: -594122485.0186318
[2026-03-21 23:32:06] 2026-03-22 03:31:27,093 | INFO     | chi2: 1.1558440906276695
[2026-03-21 23:32:06] 2026-03-22 03:31:27,094 | INFO     | current chi2=1.1558440906276695 (change=69.17487603984526 %)
[2026-03-21 23:32:06] 2026-03-22 03:31:27,096 | INFO     | sum of square deviations: 2992270021814.9917
[2026-03-21 23:32:06] 2026-03-22 03:31:27,212 | INFO     | sum of deviations: 863671134879.7017
[2026-03-21 23:32:06] 2026-03-22 03:31:27,213 | INFO     | mean x: 1774085312.4048848
[2026-03-21 23:32:06] 2026-03-22 03:31:27,213 | INFO     | mean y: 2535586.1441991543
[2026-03-21 23:32:06] 2026-03-22 03:31:27,213 | INFO     | intersect: -509525913.6427584
[2026-03-21 23:32:06] 2026-03-22 03:31:27,215 | INFO     | chi2: 0.9963764977240875
[2026-03-21 23:32:06] 2026-03-22 03:31:27,216 | INFO     | current chi2=0.9963764977240875 (change=13.796635220671039 %)
[2026-03-21 23:32:06] 2026-03-22 03:31:27,216 | INFO     | left removable region: 20
[2026-03-21 23:32:06] 2026-03-22 03:31:27,218 | INFO     | sum of square deviations: 2925311726885.9736
[2026-03-21 23:32:06] 2026-03-22 03:31:27,330 | INFO     | sum of deviations: 891446642378.3394
[2026-03-21 23:32:06] 2026-03-22 03:31:27,331 | INFO     | mean x: 1774085434.4070044
[2026-03-21 23:32:06] 2026-03-22 03:31:27,331 | INFO     | mean y: 2537462.1391386655
[2026-03-21 23:32:06] 2026-03-22 03:31:27,331 | INFO     | intersect: -538089538.1422871
[2026-03-21 23:32:06] 2026-03-22 03:31:27,334 | INFO     | chi2: 0.14891431846941358
[2026-03-21 23:32:06] 2026-03-22 03:31:27,334 | INFO     | current memory leak: 0.30 B/s (using 2113 data points, chi2=0.15)
[2026-03-21 23:32:06] 2026-03-22 03:31:27,336 | INFO     | could have reported an average CPU frequency of 2599 MHz (76 samples)
[2026-03-21 23:32:06] 2026-03-22 03:31:27,336 | INFO     | ..............................
[2026-03-21 23:32:06] 2026-03-22 03:31:27,336 | INFO     | . Timing measurements:
[2026-03-21 23:32:06] 2026-03-22 03:31:27,336 | INFO     | . get job = 0 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,337 | INFO     | . initial setup = 3 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,337 | INFO     | . payload setup = 58 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,337 | INFO     | . stage-in = 0 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,337 | INFO     | . payload execution = 130512 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,337 | INFO     | . stage-out = 5 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,337 | INFO     | . log creation = 0 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,337 | INFO     | ..............................
[2026-03-21 23:32:06] 2026-03-22 03:31:27,440 | INFO     | 
[2026-03-21 23:32:06] 2026-03-22 03:31:27,440 | INFO     | job summary report
[2026-03-21 23:32:06] 2026-03-22 03:31:27,440 | INFO     | --------------------------------------------------
[2026-03-21 23:32:06] 2026-03-22 03:31:27,440 | INFO     | PanDA job id: 7050074066
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | task id: 48966951
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | errors: (none)
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | pilot state: finished 
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | transexitcode: 0
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | exeerrorcode: 0
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | exeerrordiag: 
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | exitcode: 0
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | exitmsg: OK
[2026-03-21 23:32:06] 2026-03-22 03:31:27,441 | INFO     | cpuconsumptiontime: 111266 s
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | nevents: 400
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | neventsw: 0
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | pid: 532690
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | pgrp: 532690
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | corecount: 8
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | event service: False
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | sizes: {0: 2279716, 1: 2279800, 2: 2280233, 3: 2280261, 130575: 2362861, 130580: 2371859, 130581: 2372043, 130582: 2372237}
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | --------------------------------------------------
[2026-03-21 23:32:06] 2026-03-22 03:31:27,442 | INFO     | 
[2026-03-21 23:32:06] 2026-03-22 03:31:27,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-21 23:32:06] 2026-03-22 03:31:27,464 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,464 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | job 7050074066 has completed (purged errors)
[2026-03-21 23:32:06] 2026-03-22 03:31:27,466 | INFO     | overall cleanup function is called
[2026-03-21 23:32:06] 2026-03-22 03:31:28,475 | INFO     | --- collectZombieJob: --- 10, [532690]
[2026-03-21 23:32:06] 2026-03-22 03:31:28,475 | INFO     | zombie collector waiting for pid 532690
[2026-03-21 23:32:06] 2026-03-22 03:31:28,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 23:32:06] 2026-03-22 03:31:28,475 | INFO     | collected zombie processes
[2026-03-21 23:32:06] 2026-03-22 03:31:28,475 | INFO     | will attempt to kill all subprocesses of pid=532690
[2026-03-21 23:32:06] 2026-03-22 03:31:29,183 | INFO     | process IDs to be killed: [532690] (in reverse order)
[2026-03-21 23:32:06] 2026-03-22 03:31:29,298 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 23:32:06] 2026-03-22 03:31:29,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 23:32:06] 2026-03-22 03:31:29,313 | INFO     | did not find any defunct processes belonging to 532690
[2026-03-21 23:32:06] 2026-03-22 03:31:29,327 | INFO     | did not find any defunct processes belonging to 532690
[2026-03-21 23:32:06] 2026-03-22 03:31:29,327 | INFO     | ready for new job
[2026-03-21 23:32:06] 2026-03-22 03:31:29,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 23:32:06] 2026-03-22 03:31:29,335 | INFO     | **************************************
[2026-03-21 23:32:06] 2026-03-22 03:31:29,335 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 23:32:06] 2026-03-22 03:31:29,335 | INFO     | **************************************
[2026-03-21 23:32:06] 2026-03-22 03:31:29,335 | INFO     | 
[2026-03-21 23:32:06] 2026-03-22 03:31:29,337 | INFO     | architecture information:
[2026-03-21 23:32:06] 2026-03-22 03:31:29,337 | INFO     | executing command: cat /etc/os-release
[2026-03-21 23:32:06] 2026-03-22 03:31:29,352 | INFO     | cat /etc/os-release:
[2026-03-21 23:32:06] NAME="CentOS Linux"
[2026-03-21 23:32:06] VERSION="7 (Core)"
[2026-03-21 23:32:06] ID="centos"
[2026-03-21 23:32:06] ID_LIKE="rhel fedora"
[2026-03-21 23:32:06] VERSION_ID="7"
[2026-03-21 23:32:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 23:32:06] ANSI_COLOR="0;31"
[2026-03-21 23:32:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 23:32:06] HOME_URL="https://www.centos.org/"
[2026-03-21 23:32:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 23:32:06] 
[2026-03-21 23:32:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 23:32:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 23:32:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 23:32:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 23:32:06] 
[2026-03-21 23:32:06] 2026-03-22 03:31:29,353 | INFO     | **************************************
[2026-03-21 23:32:06] 2026-03-22 03:31:29,856 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-21 23:32:06] 2026-03-22 03:31:29,937 | INFO     | sufficient remaining disk space (75658952704 B)
[2026-03-21 23:32:06] 2026-03-22 03:31:29,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 23:32:06] 2026-03-22 03:31:29,938 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 23:32:06] 2026-03-22 03:31:29,938 | INFO     | update_server=False
[2026-03-21 23:32:06] 2026-03-22 03:31:29,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 23:32:06] 2026-03-22 03:31:29,975 | INFO     | all data control threads have been joined
[2026-03-21 23:32:06] 2026-03-22 03:31:30,059 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-21 23:32:06] 2026-03-22 03:31:30,059 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-21 23:32:06] 2026-03-22 03:31:30,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 23:32:06] 2026-03-22 03:31:30,059 | INFO     | will abort loop
[2026-03-21 23:32:06] 2026-03-22 03:31:30,075 | INFO     | all job control threads have been joined
[2026-03-21 23:32:06] 2026-03-22 03:31:30,944 | INFO     | [job] retrieve thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:30,972 | INFO     | [payload] validate_post thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:30,983 | INFO     | [data] control thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,065 | INFO     | [job] job monitor thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,081 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,082 | INFO     | [job] control thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,117 | INFO     | all payload control threads have been joined
[2026-03-21 23:32:06] 2026-03-22 03:31:31,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 23:32:06] 2026-03-22 03:31:31,474 | INFO     | [payload] failed_post thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,543 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,549 | INFO     | [job] validate thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,615 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:31,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 23:32:06] 2026-03-22 03:31:32,010 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:32,097 | INFO     | [data] copytool_in thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:32,123 | INFO     | [payload] control thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:32,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 23:32:06] 2026-03-22 03:31:33,262 | INFO     | [data] copytool_out thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:33,461 | INFO     | [job] queue monitor thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:35,813 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 23:32:06] 2026-03-22 03:31:59,632 | INFO     | [monitor] cgroup control has ended
[2026-03-21 23:32:06] 2026-03-22 03:31:59,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010804188992)>', '<ExcThread(monitor, started 140010456065792)>']
[2026-03-21 23:32:06] 2026-03-22 03:32:00,305 | INFO     | PID=520644 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-21 23:32:06] 2026-03-22 03:32:00,305 | INFO     | .. there are 28 such processes running
[2026-03-21 23:32:06] 2026-03-22 03:32:00,305 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 23:32:06] 2026-03-22 03:32:00,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 23:32:06] 2026-03-22 03:32:00,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 23:32:06] 2026-03-22 03:32:00,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 23:32:06] 2026-03-22 03:32:00,306 | INFO     | [monitor] control thread has ended
[2026-03-21 23:32:06] 2026-03-22 03:32:04,978 | INFO     | all workflow threads have been joined
[2026-03-21 23:32:06] 2026-03-22 03:32:04,978 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 23:32:06] 2026-03-22 03:32:04,978 | INFO     | traces error code: 0
[2026-03-21 23:32:06] 2026-03-22 03:32:04,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 23:32:06] 2026-03-22 03:32:05,163 [wrapper] ==== pilot stdout END ====
[2026-03-21 23:32:06] 2026-03-22 03:32:05,166 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 23:32:06] 2026-03-22 03:32:05,168 [wrapper] pilotpid: 520644
[2026-03-21 23:32:06] 2026-03-22 03:32:05,170 [wrapper] Pilot exit status: 0
[2026-03-21 23:32:06] 2026-03-22 03:32:05,246 [wrapper] pandaids: 7050074066 7050074066
[2026-03-21 23:32:06] 2026-03-22 03:32:05,395 [wrapper] cleanup supervisor_pilot 2983124 520645
[2026-03-21 23:32:06] 2026-03-22 03:32:05,446 [wrapper] Test setup, not cleaning
[2026-03-21 23:32:06] 2026-03-22 03:32:05,493 [wrapper] apfmon messages muted
[2026-03-21 23:32:06] 2026-03-22 03:32:05,545 [wrapper] ==== wrapper stdout END ====
[2026-03-21 23:32:06] 2026-03-22 03:32:05,561 [wrapper] ==== wrapper stderr END ====
[2026-03-21 23:32:06]  *** Error codes and diagnostics ***
[2026-03-21 23:32:06]     "exeErrorCode": 0,
[2026-03-21 23:32:06]     "exeErrorDiag": "",
[2026-03-21 23:32:06]     "pilotErrorCode": 0,
[2026-03-21 23:32:06]     "pilotErrorDiag": "",
[2026-03-21 23:32:06]  *** Listing of results directory ***
[2026-03-21 23:32:06] total 767436
[2026-03-21 23:32:06] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 13:53 pilot3.tar.gz
[2026-03-21 23:32:06] -rwx------. 1 boincer umatlas     36322 Mar 11 14:08 runpilot2-wrapper.sh
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 14:08 queuedata.json
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas       100 Mar 20 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 23:32:06] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 20 00:00 run_atlas
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas       105 Mar 20 00:00 job.xml
[2026-03-21 23:32:06] -rw-r--r--. 3 boincer umatlas 237309099 Mar 20 00:00 EVNT.48966948._000090.pool.root.1
[2026-03-21 23:32:06] -rw-r--r--. 3 boincer umatlas 237309099 Mar 20 00:00 ATLAS.root_0
[2026-03-21 23:32:06] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 00:00 start_atlas.sh
[2026-03-21 23:32:06] drwxrwx--x. 2 boincer umatlas      4096 Mar 20 00:00 shared
[2026-03-21 23:32:06] -rw-r--r--. 2 boincer umatlas    597513 Mar 20 00:00 input.tar.gz
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas         0 Mar 20 00:00 boinc_lockfile
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas      2539 Mar 20 11:13 pandaJob.out
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas        57 Mar 20 11:13 setup.sh.local
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas   1010663 Mar 20 11:14 agis_schedconf.cvmfs.json
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas       440 Mar 20 11:14 workernode_map.json
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas 272747253 Mar 21 23:30 HITS.48966951._002260.pool.root.1
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas       533 Mar 21 23:30 boinc_task_state.xml
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas        96 Mar 21 23:31 pilot_heartbeat.json
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas      1055 Mar 21 23:31 memory_monitor_summary.json
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas   1511579 Mar 21 23:31 agis_ddmendpoints.agis.ALL.json
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas      6660 Mar 21 23:31 init_data.xml
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas   1855913 Mar 21 23:31 log.48966951._002260.job.log.tgz.1
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas      6413 Mar 21 23:31 heartbeat.json
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas        29 Mar 21 23:31 wrapper_checkpoint.txt
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas      8192 Mar 21 23:31 boinc_mmap_file
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas      5005 Mar 21 23:32 pilotlog.txt
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas  15415915 Mar 21 23:32 log.48966951._002260.job.log.1
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas       357 Mar 21 23:32 output.list
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas       620 Mar 21 23:32 runtime_log
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas  17285120 Mar 21 23:32 result.tar.gz
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas      9418 Mar 21 23:32 runtime_log.err
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas       788 Mar 21 23:32 EfQODmu9cK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWrhLDmgONCBn.diag
[2026-03-21 23:32:06] -rw-r--r--. 1 boincer umatlas     23611 Mar 21 23:32 stderr.txt
[2026-03-21 23:32:06] HITS file was successfully produced:
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas 272747253 Mar 21 23:30 shared/HITS.pool.root.1
[2026-03-21 23:32:06]  *** Contents of shared directory: ***
[2026-03-21 23:32:06] total 515592
[2026-03-21 23:32:06] -rw-r--r--. 3 boincer umatlas 237309099 Mar 20 00:00 ATLAS.root_0
[2026-03-21 23:32:06] -rw-r--r--. 2 boincer umatlas     15845 Mar 20 00:00 start_atlas.sh
[2026-03-21 23:32:06] -rw-r--r--. 2 boincer umatlas    597513 Mar 20 00:00 input.tar.gz
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas 272747253 Mar 21 23:30 HITS.pool.root.1
[2026-03-21 23:32:06] -rw-------. 1 boincer umatlas  17285120 Mar 21 23:32 result.tar.gz
23:32:08 (505225): run_atlas exited; CPU time 118214.369407
23:32:08 (505225): called boinc_finish(0)

</stderr_txt>
]]>

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