Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:04 (1203907): wrapper (7.7.26015): starting
17:46:04 (1203907): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 17:46:04] Arguments: --nthreads 12
[2026-03-19 17:46:04] Threads: 12
[2026-03-19 17:46:04] Checking for CVMFS
[2026-03-19 17:46:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 17:46:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 17:46:05] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 17:46:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 17:46:06] 2.13.3.0 9702 193330 540248 157472 3 392 29463851 32935936 24261 16776704 0 790103781 99.675 648937651 32447 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 17:46:06] CVMFS is ok
[2026-03-19 17:46:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 17:46:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 17:46:06] Further information can be found at the LHC@home message board.
[2026-03-19 17:46:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 17:46:06] Checking for apptainer binary...
[2026-03-19 17:46:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 17:46:06] Running /usr/bin/apptainer --version
[2026-03-19 17:46:06] apptainer version 1.4.5-2.el9
[2026-03-19 17:46:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 17:46:07] c-4-37.aglt2.org
[2026-03-19 17:46:07] apptainer works
[2026-03-19 17:46:07] Set ATHENA_PROC_NUMBER=12
[2026-03-19 17:46:07] Set ATHENA_CORE_NUMBER=12
[2026-03-19 17:46:07] Starting ATLAS job with PandaID=7056909756
[2026-03-19 17:46:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:13:33 (505224): wrapper (7.7.26015): starting
11:13:33 (505224): wrapper: running run_atlas (--nthreads 8)
[2026-03-20 11:13:33] Arguments: --nthreads 8
[2026-03-20 11:13:33] Threads: 8
[2026-03-20 11:13:33] This job has been restarted, cleaning up previous attempt
[2026-03-20 11:13:33] Checking for CVMFS
[2026-03-20 11:13:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 11:13:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 11:13:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 11:13:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 11:13:36] 2.13.3.0 9702 194377 533380 157505 2 81 30402134 32935937 23985 16776704 0 794102422 99.675 653259144 32449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-20 11:13:36] CVMFS is ok
[2026-03-20 11:13:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 11:13:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 11:13:36] Further information can be found at the LHC@home message board.
[2026-03-20 11:13:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 11:13:36] Checking for apptainer binary...
[2026-03-20 11:13:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 11:13:36] Running /usr/bin/apptainer --version
[2026-03-20 11:13:37] apptainer version 1.4.5-2.el9
[2026-03-20 11:13:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 11:13:38] c-4-37.aglt2.org
[2026-03-20 11:13:38] apptainer works
[2026-03-20 11:13:38] Set ATHENA_PROC_NUMBER=8
[2026-03-20 11:13:38] Set ATHENA_CORE_NUMBER=8
[2026-03-20 11:13:38] Starting ATLAS job with PandaID=7056909756
[2026-03-20 11:13:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-22 02:21:43]  *** The last 200 lines of the pilot log: ***
[2026-03-22 02:21:43] 2026-03-22 06:21:09,307 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7056909756/memory_monitor_summary.json (trf name=prmon)
[2026-03-22 02:21:43] 2026-03-22 06:21:09,308 | INFO     | extracted standard info from prmon json
[2026-03-22 02:21:43] 2026-03-22 06:21:09,308 | INFO     | extracted standard memory fields from prmon json
[2026-03-22 02:21:43] 2026-03-22 06:21:09,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-22 02:21:43] 2026-03-22 06:21:09,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-22 02:21:43] 2026-03-22 06:21:09,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-22 02:21:43] 2026-03-22 06:21:09,347 | INFO     | fitting pss+swap vs Time
[2026-03-22 02:21:43] 2026-03-22 06:21:09,351 | INFO     | sum of square deviations: 3802350197554.0884
[2026-03-22 02:21:43] 2026-03-22 06:21:09,476 | INFO     | sum of deviations: 4037971946309.4526
[2026-03-22 02:21:43] 2026-03-22 06:21:09,476 | INFO     | mean x: 1774090109.8499568
[2026-03-22 02:21:43] 2026-03-22 06:21:09,477 | INFO     | mean y: 2515582.4839549004
[2026-03-22 02:21:43] 2026-03-22 06:21:09,477 | INFO     | intersect: -1881510275.6306767
[2026-03-22 02:21:43] 2026-03-22 06:21:09,480 | INFO     | chi2: 4.564792285871995
[2026-03-22 02:21:43] 2026-03-22 06:21:09,483 | INFO     | sum of square deviations: 3777670380945.9697
[2026-03-22 02:21:43] 2026-03-22 06:21:09,605 | INFO     | sum of deviations: 4021196956329.0244
[2026-03-22 02:21:43] 2026-03-22 06:21:09,605 | INFO     | mean x: 1774089957.350717
[2026-03-22 02:21:43] 2026-03-22 06:21:09,605 | INFO     | mean y: 2515478.832681443
[2026-03-22 02:21:43] 2026-03-22 06:21:09,605 | INFO     | intersect: -1885940743.4823449
[2026-03-22 02:21:43] 2026-03-22 06:21:09,608 | INFO     | chi2: 4.564548001304027
[2026-03-22 02:21:43] 2026-03-22 06:21:09,608 | INFO     | current chi2=4.564548001304027 (change=0.0053514936205055095 %)
[2026-03-22 02:21:43] 2026-03-22 06:21:09,609 | INFO     | right removable region: 2300
[2026-03-22 02:21:43] 2026-03-22 06:21:09,611 | INFO     | sum of square deviations: 3777669888675.9717
[2026-03-22 02:21:43] 2026-03-22 06:21:09,734 | INFO     | sum of deviations: 3371461650814.766
[2026-03-22 02:21:43] 2026-03-22 06:21:09,735 | INFO     | mean x: 1774090262.350717
[2026-03-22 02:21:43] 2026-03-22 06:21:09,735 | INFO     | mean y: 2519699.930899609
[2026-03-22 02:21:43] 2026-03-22 06:21:09,735 | INFO     | intersect: -1580804799.2607744
[2026-03-22 02:21:43] 2026-03-22 06:21:09,738 | INFO     | chi2: 1.6328907597539066
[2026-03-22 02:21:43] 2026-03-22 06:21:09,738 | INFO     | current chi2=1.6328907597539066 (change=64.2285857166449 %)
[2026-03-22 02:21:43] 2026-03-22 06:21:09,741 | INFO     | sum of square deviations: 3753096745665.056
[2026-03-22 02:21:43] 2026-03-22 06:21:09,833 | INFO     | time since job start (140768s) is within the limit (345600.0s)
[2026-03-22 02:21:43] 2026-03-22 06:21:09,865 | INFO     | sum of deviations: 3095157895839.491
[2026-03-22 02:21:43] 2026-03-22 06:21:09,865 | INFO     | mean x: 1774090414.8510454
[2026-03-22 02:21:43] 2026-03-22 06:21:09,865 | INFO     | mean y: 2521414.0862369337
[2026-03-22 02:21:43] 2026-03-22 06:21:09,865 | INFO     | intersect: -1460561028.9128015
[2026-03-22 02:21:43] 2026-03-22 06:21:09,868 | INFO     | chi2: 1.1389849591457706
[2026-03-22 02:21:43] 2026-03-22 06:21:09,869 | INFO     | current chi2=1.1389849591457706 (change=30.247326568408823 %)
[2026-03-22 02:21:43] 2026-03-22 06:21:09,871 | INFO     | sum of square deviations: 3728630535043.8447
[2026-03-22 02:21:43] 2026-03-22 06:21:09,993 | INFO     | sum of deviations: 2948292450435.9546
[2026-03-22 02:21:43] 2026-03-22 06:21:09,993 | INFO     | mean x: 1774090567.3509386
[2026-03-22 02:21:43] 2026-03-22 06:21:09,993 | INFO     | mean y: 2522329.348319511
[2026-03-22 02:21:43] 2026-03-22 06:21:09,994 | INFO     | intersect: -1400281669.8548105
[2026-03-22 02:21:43] 2026-03-22 06:21:09,997 | INFO     | chi2: 1.0255556373779007
[2026-03-22 02:21:43] 2026-03-22 06:21:09,997 | INFO     | current chi2=1.0255556373779007 (change=9.958807696015667 %)
[2026-03-22 02:21:43] 2026-03-22 06:21:09,997 | INFO     | left removable region: 30
[2026-03-22 02:21:43] 2026-03-22 06:21:10,000 | INFO     | sum of square deviations: 3627033906994.372
[2026-03-22 02:21:43] 2026-03-22 06:21:10,119 | INFO     | sum of deviations: 2745258952397.2915
[2026-03-22 02:21:43] 2026-03-22 06:21:10,120 | INFO     | mean x: 1774090841.8506608
[2026-03-22 02:21:43] 2026-03-22 06:21:10,120 | INFO     | mean y: 2523397.4079295155
[2026-03-22 02:21:43] 2026-03-22 06:21:10,120 | INFO     | intersect: -1340264922.426802
[2026-03-22 02:21:43] 2026-03-22 06:21:10,123 | INFO     | chi2: 0.9844831727557312
[2026-03-22 02:21:43] 2026-03-22 06:21:10,123 | INFO     | current memory leak: 0.76 B/s (using 2270 data points, chi2=0.98)
[2026-03-22 02:21:43] 2026-03-22 06:21:10,125 | INFO     | could have reported an average CPU frequency of 2599 MHz (81 samples)
[2026-03-22 02:21:43] 2026-03-22 06:21:10,125 | INFO     | ..............................
[2026-03-22 02:21:43] 2026-03-22 06:21:10,125 | INFO     | . Timing measurements:
[2026-03-22 02:21:43] 2026-03-22 06:21:10,125 | INFO     | . get job = 0 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,125 | INFO     | . initial setup = 3 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,125 | INFO     | . payload setup = 60 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,125 | INFO     | . stage-in = 0 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,126 | INFO     | . payload execution = 140679 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,126 | INFO     | . stage-out = 3 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,126 | INFO     | . log creation = 0 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,126 | INFO     | ..............................
[2026-03-22 02:21:43] 2026-03-22 06:21:10,289 | INFO     | 
[2026-03-22 02:21:43] 2026-03-22 06:21:10,289 | INFO     | job summary report
[2026-03-22 02:21:43] 2026-03-22 06:21:10,289 | INFO     | --------------------------------------------------
[2026-03-22 02:21:43] 2026-03-22 06:21:10,289 | INFO     | PanDA job id: 7056909756
[2026-03-22 02:21:43] 2026-03-22 06:21:10,289 | INFO     | task id: 49176974
[2026-03-22 02:21:43] 2026-03-22 06:21:10,289 | INFO     | errors: (none)
[2026-03-22 02:21:43] 2026-03-22 06:21:10,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | pilot state: finished 
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | transexitcode: 0
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | exeerrorcode: 0
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | exeerrordiag: 
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | exitcode: 0
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | exitmsg: OK
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | cpuconsumptiontime: 137588 s
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | nevents: 400
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | neventsw: 0
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | pid: 534679
[2026-03-22 02:21:43] 2026-03-22 06:21:10,290 | INFO     | pgrp: 534679
[2026-03-22 02:21:43] 2026-03-22 06:21:10,291 | INFO     | corecount: 8
[2026-03-22 02:21:43] 2026-03-22 06:21:10,291 | INFO     | event service: False
[2026-03-22 02:21:43] 2026-03-22 06:21:10,291 | INFO     | sizes: {0: 2279234, 1: 2279919, 2: 2279919, 3: 2280380, 4: 2280408, 15: 2280436, 140744: 2368773, 140748: 2377771, 140750: 2377827, 140754: 2378021}
[2026-03-22 02:21:43] 2026-03-22 06:21:10,291 | INFO     | --------------------------------------------------
[2026-03-22 02:21:43] 2026-03-22 06:21:10,291 | INFO     | 
[2026-03-22 02:21:43] 2026-03-22 06:21:10,291 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-22 02:21:43] 2026-03-22 06:21:10,310 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-22 02:21:43] 2026-03-22 06:21:10,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,312 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-22 02:21:43] 2026-03-22 06:21:10,313 | INFO     | job 7056909756 has completed (purged errors)
[2026-03-22 02:21:43] 2026-03-22 06:21:10,313 | INFO     | overall cleanup function is called
[2026-03-22 02:21:43] 2026-03-22 06:21:11,322 | INFO     | --- collectZombieJob: --- 10, [534679]
[2026-03-22 02:21:43] 2026-03-22 06:21:11,322 | INFO     | zombie collector waiting for pid 534679
[2026-03-22 02:21:43] 2026-03-22 06:21:11,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-22 02:21:43] 2026-03-22 06:21:11,322 | INFO     | collected zombie processes
[2026-03-22 02:21:43] 2026-03-22 06:21:11,322 | INFO     | will attempt to kill all subprocesses of pid=534679
[2026-03-22 02:21:43] 2026-03-22 06:21:11,681 | INFO     | process IDs to be killed: [534679] (in reverse order)
[2026-03-22 02:21:43] 2026-03-22 06:21:11,788 | WARNING  | found no corresponding commands to process id(s)
[2026-03-22 02:21:43] 2026-03-22 06:21:11,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-22 02:21:43] 2026-03-22 06:21:11,802 | INFO     | did not find any defunct processes belonging to 534679
[2026-03-22 02:21:43] 2026-03-22 06:21:11,816 | INFO     | did not find any defunct processes belonging to 534679
[2026-03-22 02:21:43] 2026-03-22 06:21:11,816 | INFO     | ready for new job
[2026-03-22 02:21:43] 2026-03-22 06:21:11,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-22 02:21:43] 2026-03-22 06:21:11,824 | INFO     | **************************************
[2026-03-22 02:21:43] 2026-03-22 06:21:11,825 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-22 02:21:43] 2026-03-22 06:21:11,825 | INFO     | **************************************
[2026-03-22 02:21:43] 2026-03-22 06:21:11,825 | INFO     | 
[2026-03-22 02:21:43] 2026-03-22 06:21:11,827 | INFO     | architecture information:
[2026-03-22 02:21:43] 2026-03-22 06:21:11,827 | INFO     | executing command: cat /etc/os-release
[2026-03-22 02:21:43] 2026-03-22 06:21:11,846 | INFO     | cat /etc/os-release:
[2026-03-22 02:21:43] NAME="CentOS Linux"
[2026-03-22 02:21:43] VERSION="7 (Core)"
[2026-03-22 02:21:43] ID="centos"
[2026-03-22 02:21:43] ID_LIKE="rhel fedora"
[2026-03-22 02:21:43] VERSION_ID="7"
[2026-03-22 02:21:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-22 02:21:43] ANSI_COLOR="0;31"
[2026-03-22 02:21:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-22 02:21:43] HOME_URL="https://www.centos.org/"
[2026-03-22 02:21:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-22 02:21:43] 
[2026-03-22 02:21:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-22 02:21:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-22 02:21:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-22 02:21:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-22 02:21:43] 
[2026-03-22 02:21:43] 2026-03-22 06:21:11,846 | INFO     | **************************************
[2026-03-22 02:21:43] 2026-03-22 06:21:12,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-22 02:21:43] 2026-03-22 06:21:12,374 | INFO     | sufficient remaining disk space (76392955904 B)
[2026-03-22 02:21:43] 2026-03-22 06:21:12,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-22 02:21:43] 2026-03-22 06:21:12,375 | INFO     | current server update state: UPDATING_FINAL
[2026-03-22 02:21:43] 2026-03-22 06:21:12,375 | INFO     | update_server=False
[2026-03-22 02:21:43] 2026-03-22 06:21:12,375 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-22 02:21:43] 2026-03-22 06:21:12,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-22 02:21:43] 2026-03-22 06:21:12,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-22 02:21:43] 2026-03-22 06:21:12,744 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-22 02:21:43] 2026-03-22 06:21:12,745 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-22 02:21:43] 2026-03-22 06:21:12,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-22 02:21:43] 2026-03-22 06:21:12,746 | INFO     | will abort loop
[2026-03-22 02:21:43] 2026-03-22 06:21:13,121 | INFO     | all payload control threads have been joined
[2026-03-22 02:21:43] 2026-03-22 06:21:13,160 | INFO     | all job control threads have been joined
[2026-03-22 02:21:43] 2026-03-22 06:21:13,381 | INFO     | [job] retrieve thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:13,415 | INFO     | all data control threads have been joined
[2026-03-22 02:21:43] 2026-03-22 06:21:13,714 | INFO     | [job] create_data_payload thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:13,751 | INFO     | [job] job monitor thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:13,786 | INFO     | [payload] validate_pre thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:13,789 | INFO     | [payload] failed_post thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:13,873 | INFO     | [job] validate thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:13,882 | INFO     | [payload] validate_post thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:14,127 | INFO     | [payload] control thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:14,166 | INFO     | [job] control thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:14,316 | INFO     | [payload] execute_payloads thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:14,421 | INFO     | [data] control thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:14,655 | INFO     | [data] copytool_out thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:14,655 | INFO     | [data] copytool_in thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:15,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-22 02:21:43] 2026-03-22 06:21:16,226 | INFO     | [monitor] cgroup control has ended
[2026-03-22 02:21:43] 2026-03-22 06:21:16,244 | INFO     | [job] queue monitor thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:16,384 | INFO     | [data] queue_monitor thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:22,471 | INFO     | job.realtimelogging is not enabled
[2026-03-22 02:21:43] 2026-03-22 06:21:23,476 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-22 02:21:43] 2026-03-22 06:21:23,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417836951360)>', '<ExcThread(monitor, started 140417035134720)>']
[2026-03-22 02:21:43] 2026-03-22 06:21:28,656 | INFO     | all workflow threads have been joined
[2026-03-22 02:21:43] 2026-03-22 06:21:28,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-22 02:21:43] 2026-03-22 06:21:28,656 | INFO     | traces error code: 0
[2026-03-22 02:21:43] 2026-03-22 06:21:28,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-22 02:21:43] 2026-03-22 06:21:43,437 | INFO     | PID=520538 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-22 02:21:43] 2026-03-22 06:21:43,437 | INFO     | .. there are 21 such processes running
[2026-03-22 02:21:43] 2026-03-22 06:21:43,438 | INFO     | found 0 job(s) in 20 queues
[2026-03-22 02:21:43] 2026-03-22 06:21:43,438 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-22 02:21:43] 2026-03-22 06:21:43,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-22 02:21:43] 2026-03-22 06:21:43,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-22 02:21:43] 2026-03-22 06:21:43,438 | INFO     | [monitor] control thread has ended
[2026-03-22 02:21:43] 2026-03-22 06:21:43,594 [wrapper] ==== pilot stdout END ====
[2026-03-22 02:21:43] 2026-03-22 06:21:43,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-22 02:21:43] 2026-03-22 06:21:43,601 [wrapper] pilotpid: 520538
[2026-03-22 02:21:43] 2026-03-22 06:21:43,605 [wrapper] Pilot exit status: 0
[2026-03-22 02:21:43] 2026-03-22 06:21:43,616 [wrapper] pandaids: 7056909756 7056909756
[2026-03-22 02:21:43] 2026-03-22 06:21:43,663 [wrapper] cleanup supervisor_pilot 3436636 520539
[2026-03-22 02:21:43] 2026-03-22 06:21:43,666 [wrapper] Test setup, not cleaning
[2026-03-22 02:21:43] 2026-03-22 06:21:43,668 [wrapper] apfmon messages muted
[2026-03-22 02:21:43] 2026-03-22 06:21:43,670 [wrapper] ==== wrapper stdout END ====
[2026-03-22 02:21:43] 2026-03-22 06:21:43,672 [wrapper] ==== wrapper stderr END ====
[2026-03-22 02:21:43]  *** Error codes and diagnostics ***
[2026-03-22 02:21:43]     "exeErrorCode": 0,
[2026-03-22 02:21:43]     "exeErrorDiag": "",
[2026-03-22 02:21:43]     "pilotErrorCode": 0,
[2026-03-22 02:21:43]     "pilotErrorDiag": "",
[2026-03-22 02:21:43]  *** Listing of results directory ***
[2026-03-22 02:21:43] total 751524
[2026-03-22 02:21:43] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-22 02:21:43] -rwx------. 1 boincer umatlas     36322 Mar 16 09:17 runpilot2-wrapper.sh
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 09:19 pilot3.tar.gz
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 09:25 queuedata.json
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas       100 Mar 19 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-22 02:21:43] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 17:46 run_atlas
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas       105 Mar 19 17:46 job.xml
[2026-03-22 02:21:43] -rw-r--r--. 3 boincer umatlas 241891819 Mar 19 17:46 EVNT.49135955._000010.pool.root.1
[2026-03-22 02:21:43] -rw-r--r--. 3 boincer umatlas 241891819 Mar 19 17:46 ATLAS.root_0
[2026-03-22 02:21:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 17:46 start_atlas.sh
[2026-03-22 02:21:43] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 17:46 shared
[2026-03-22 02:21:43] -rw-r--r--. 2 boincer umatlas    597553 Mar 19 17:46 input.tar.gz
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas         0 Mar 19 17:46 boinc_lockfile
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas      2633 Mar 20 11:13 pandaJob.out
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas        57 Mar 20 11:13 setup.sh.local
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas   1010663 Mar 20 11:14 agis_schedconf.cvmfs.json
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas       440 Mar 20 11:14 workernode_map.json
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas      6660 Mar 22 02:20 init_data.xml
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas 244371761 Mar 22 02:20 HITS.49176974._000234.pool.root.1
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas       534 Mar 22 02:20 boinc_task_state.xml
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas      1056 Mar 22 02:20 memory_monitor_summary.json
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas   1511579 Mar 22 02:21 agis_ddmendpoints.agis.ALL.json
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas   1986787 Mar 22 02:21 log.49176974._000234.job.log.tgz.1
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas        96 Mar 22 02:21 pilot_heartbeat.json
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas      6411 Mar 22 02:21 heartbeat.json
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas        30 Mar 22 02:21 wrapper_checkpoint.txt
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas      8192 Mar 22 02:21 boinc_mmap_file
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas       822 Mar 22 02:21 pilotlog.txt
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas  16742316 Mar 22 02:21 log.49176974._000234.job.log.1
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas       357 Mar 22 02:21 output.list
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas       620 Mar 22 02:21 runtime_log
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas  18749440 Mar 22 02:21 result.tar.gz
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas       789 Mar 22 02:21 y28NDmP0MM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5ktLDmsjXMqm.diag
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas      9418 Mar 22 02:21 runtime_log.err
[2026-03-22 02:21:43] -rw-r--r--. 1 boincer umatlas     23346 Mar 22 02:21 stderr.txt
[2026-03-22 02:21:43] HITS file was successfully produced:
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas 244371761 Mar 22 02:20 shared/HITS.pool.root.1
[2026-03-22 02:21:43]  *** Contents of shared directory: ***
[2026-03-22 02:21:43] total 493788
[2026-03-22 02:21:43] -rw-r--r--. 3 boincer umatlas 241891819 Mar 19 17:46 ATLAS.root_0
[2026-03-22 02:21:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 17:46 start_atlas.sh
[2026-03-22 02:21:43] -rw-r--r--. 2 boincer umatlas    597553 Mar 19 17:46 input.tar.gz
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas 244371761 Mar 22 02:20 HITS.pool.root.1
[2026-03-22 02:21:43] -rw-------. 1 boincer umatlas  18749440 Mar 22 02:21 result.tar.gz
02:21:45 (505224): run_atlas exited; CPU time 145304.401454
02:21:45 (505224): called boinc_finish(0)

</stderr_txt>
]]>

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