Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:31:40 (13021): wrapper (7.7.26015): starting
17:31:40 (13021): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 17:31:40] Arguments: --nthreads 12
[2026-03-19 17:31:40] Threads: 12
[2026-03-19 17:31:40] Checking for CVMFS
[2026-03-19 17:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 17:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 17:31:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 17:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 17:31:40] 2.11.2.0 2998 266658 102024 157472 3 1 10403637 20275200 1 130560 0 110982162 99.945 12857206 30703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-19 17:31:40] CVMFS is ok
[2026-03-19 17:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 17:31:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 17:31:40] Further information can be found at the LHC@home message board.
[2026-03-19 17:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 17:31:40] Checking for apptainer binary...
[2026-03-19 17:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 17:31:40] Running /usr/bin/apptainer --version
[2026-03-19 17:31:40] apptainer version 1.3.2-1.el7
[2026-03-19 17:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 17:31:42] c-205-12.aglt2.org
[2026-03-19 17:31:42] apptainer works
[2026-03-19 17:31:42] Set ATHENA_PROC_NUMBER=12
[2026-03-19 17:31:42] Set ATHENA_CORE_NUMBER=12
[2026-03-19 17:31:42] Starting ATLAS job with PandaID=7050046577
[2026-03-19 17:31:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 18:56:20]  *** The last 200 lines of the pilot log: ***
[2026-03-19 18:56:20]  guid=36483f71-2013-4559-8e61-1cacec023d28
[2026-03-19 18:56:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-19 18:56:20]  is_altstaged=None
[2026-03-19 18:56:20]  is_tar=False
[2026-03-19 18:56:20]  lfn=log.48967085._010471.job.log.tgz.1
[2026-03-19 18:56:20]  mtime=0
[2026-03-19 18:56:20]  protocol_id=None
[2026-03-19 18:56:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 18:56:20]  replicas=None
[2026-03-19 18:56:20]  scope=mc23_13p6TeV
[2026-03-19 18:56:20]  status=None
[2026-03-19 18:56:20]  status_code=0
[2026-03-19 18:56:20]  storage_token=
[2026-03-19 18:56:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7050046577/log.48967085._010471.job.log.tgz.1
[2026-03-19 18:56:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/c0/log.48967085._010471.job.log.tgz.1
[2026-03-19 18:56:20]  workdir=None
[2026-03-19 18:56:20] ]
[2026-03-19 18:56:20] 2026-03-19 22:55:31,499 | INFO     | transferring file log.48967085._010471.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7050046577/log.48967085._010471.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-19 18:56:20] 2026-03-19 22:55:31,499 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7050046577/log.48967085._010471.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._010471.job
[2026-03-19 18:56:20] 2026-03-19 22:55:31,520 | INFO     | adding to output.list: log.48967085._010471.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/c0/log.48967085._010471.job.log.tg
[2026-03-19 18:56:20] 2026-03-19 22:55:31,521 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 18:56:20] 2026-03-19 22:55:31,521 | INFO     | summary of transferred files:
[2026-03-19 18:56:20] 2026-03-19 22:55:31,522 | INFO     |  -- lfn=log.48967085._010471.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 18:56:20] 2026-03-19 22:55:31,522 | INFO     | stage-out finished correctly
[2026-03-19 18:56:20] 2026-03-19 22:55:31,914 | INFO     | monitor loop #382: job 0:7050046577 is in state 'finished'
[2026-03-19 18:56:20] 2026-03-19 22:55:31,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 18:56:20] 2026-03-19 22:55:32,855 | INFO     | time since job start (5006s) is within the limit (345600.0s)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,417 | INFO     | monitor loop #383: job 0:7050046577 is in state 'finished'
[2026-03-19 18:56:20] 2026-03-19 22:55:34,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 18:56:20] 2026-03-19 22:55:34,624 | INFO     | job 7050046577 has state=finished
[2026-03-19 18:56:20] 2026-03-19 22:55:34,624 | INFO     | preparing for final server update for job 7050046577 in state='finished'
[2026-03-19 18:56:20] 2026-03-19 22:55:34,624 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7050046577/jobReport.json
[2026-03-19 18:56:20] 2026-03-19 22:55:34,627 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-19 18:56:20] 2026-03-19 22:55:34,628 | INFO     | this job has now completed (state=finished)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,628 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,628 | INFO     | log transfer has been attempted: DONE
[2026-03-19 18:56:20] 2026-03-19 22:55:34,628 | INFO     | job 7050046577 has finished - writing final server update
[2026-03-19 18:56:20] 2026-03-19 22:55:34,629 | INFO     | total number of processed events: 400 (read)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,631 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050046577/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,631 | INFO     | extracted standard info from prmon json
[2026-03-19 18:56:20] 2026-03-19 22:55:34,632 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 18:56:20] 2026-03-19 22:55:34,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 18:56:20] 2026-03-19 22:55:34,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 18:56:20] 2026-03-19 22:55:34,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 18:56:20] 2026-03-19 22:55:34,634 | INFO     | fitting pss+swap vs Time
[2026-03-19 18:56:20] 2026-03-19 22:55:34,634 | INFO     | sum of square deviations: 130793150.0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,634 | INFO     | sum of deviations: -9605274232.0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,634 | INFO     | mean x: 1773958520.0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,634 | INFO     | mean y: 2823446.8533333335
[2026-03-19 18:56:20] 2026-03-19 22:55:34,635 | INFO     | intersect: 130279967630.57286
[2026-03-19 18:56:20] 2026-03-19 22:55:34,635 | INFO     | chi2: 0.09420902568522892
[2026-03-19 18:56:20] 2026-03-19 22:55:34,635 | INFO     | current memory leak: -73.44 B/s (using 75 data points, chi2=0.09)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,635 | INFO     | could have reported an average CPU frequency of 1806 MHz (6 samples)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,635 | INFO     | ..............................
[2026-03-19 18:56:20] 2026-03-19 22:55:34,635 | INFO     | . Timing measurements:
[2026-03-19 18:56:20] 2026-03-19 22:55:34,635 | INFO     | . get job = 0 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,636 | INFO     | . initial setup = 7 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,636 | INFO     | . payload setup = 14 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,636 | INFO     | . stage-in = 0 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,636 | INFO     | . payload execution = 4974 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,636 | INFO     | . stage-out = 0 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,636 | INFO     | . log creation = 0 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,636 | INFO     | ..............................
[2026-03-19 18:56:20] 2026-03-19 22:55:34,713 | INFO     | 
[2026-03-19 18:56:20] 2026-03-19 22:55:34,714 | INFO     | job summary report
[2026-03-19 18:56:20] 2026-03-19 22:55:34,714 | INFO     | --------------------------------------------------
[2026-03-19 18:56:20] 2026-03-19 22:55:34,714 | INFO     | PanDA job id: 7050046577
[2026-03-19 18:56:20] 2026-03-19 22:55:34,714 | INFO     | task id: 48967085
[2026-03-19 18:56:20] 2026-03-19 22:55:34,714 | INFO     | errors: (none)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,714 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 18:56:20] 2026-03-19 22:55:34,715 | INFO     | pilot state: finished 
[2026-03-19 18:56:20] 2026-03-19 22:55:34,715 | INFO     | transexitcode: 0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,715 | INFO     | exeerrorcode: 0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,715 | INFO     | exeerrordiag: 
[2026-03-19 18:56:20] 2026-03-19 22:55:34,715 | INFO     | exitcode: 0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,715 | INFO     | exitmsg: OK
[2026-03-19 18:56:20] 2026-03-19 22:55:34,716 | INFO     | cpuconsumptiontime: 54184 s
[2026-03-19 18:56:20] 2026-03-19 22:55:34,716 | INFO     | nevents: 400
[2026-03-19 18:56:20] 2026-03-19 22:55:34,716 | INFO     | neventsw: 0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,716 | INFO     | pid: 21521
[2026-03-19 18:56:20] 2026-03-19 22:55:34,716 | INFO     | pgrp: 21521
[2026-03-19 18:56:20] 2026-03-19 22:55:34,716 | INFO     | corecount: 12
[2026-03-19 18:56:20] 2026-03-19 22:55:34,717 | INFO     | event service: False
[2026-03-19 18:56:20] 2026-03-19 22:55:34,717 | INFO     | sizes: {0: 2279158, 1: 2280276, 12: 2280276, 4992: 2306629, 4994: 2315627, 4997: 2316005}
[2026-03-19 18:56:20] 2026-03-19 22:55:34,717 | INFO     | --------------------------------------------------
[2026-03-19 18:56:20] 2026-03-19 22:55:34,717 | INFO     | 
[2026-03-19 18:56:20] 2026-03-19 22:55:34,717 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 18:56:20] 2026-03-19 22:55:34,742 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,743 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,743 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,743 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,743 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,743 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,745 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,746 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 18:56:20] 2026-03-19 22:55:34,746 | INFO     | job 7050046577 has completed (purged errors)
[2026-03-19 18:56:20] 2026-03-19 22:55:34,746 | INFO     | overall cleanup function is called
[2026-03-19 18:56:20] 2026-03-19 22:55:35,750 | INFO     | --- collectZombieJob: --- 10, [21521]
[2026-03-19 18:56:20] 2026-03-19 22:55:35,750 | INFO     | zombie collector waiting for pid 21521
[2026-03-19 18:56:20] 2026-03-19 22:55:35,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 18:56:20] 2026-03-19 22:55:35,750 | INFO     | collected zombie processes
[2026-03-19 18:56:20] 2026-03-19 22:55:35,750 | INFO     | will attempt to kill all subprocesses of pid=21521
[2026-03-19 18:56:20] 2026-03-19 22:55:35,846 | INFO     | process IDs to be killed: [21521] (in reverse order)
[2026-03-19 18:56:20] 2026-03-19 22:55:35,898 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 18:56:20] 2026-03-19 22:55:35,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 18:56:20] 2026-03-19 22:55:35,902 | INFO     | did not find any defunct processes belonging to 21521
[2026-03-19 18:56:20] 2026-03-19 22:55:35,905 | INFO     | did not find any defunct processes belonging to 21521
[2026-03-19 18:56:20] 2026-03-19 22:55:35,905 | INFO     | ready for new job
[2026-03-19 18:56:20] 2026-03-19 22:55:35,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 18:56:20] 2026-03-19 22:55:35,907 | INFO     | **************************************
[2026-03-19 18:56:20] 2026-03-19 22:55:35,907 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 18:56:20] 2026-03-19 22:55:35,907 | INFO     | **************************************
[2026-03-19 18:56:20] 2026-03-19 22:55:35,907 | INFO     | 
[2026-03-19 18:56:20] 2026-03-19 22:55:35,908 | INFO     | architecture information:
[2026-03-19 18:56:20] 2026-03-19 22:55:35,908 | INFO     | executing command: cat /etc/os-release
[2026-03-19 18:56:20] 2026-03-19 22:55:35,924 | INFO     | cat /etc/os-release:
[2026-03-19 18:56:20] NAME="CentOS Linux"
[2026-03-19 18:56:20] VERSION="7 (Core)"
[2026-03-19 18:56:20] ID="centos"
[2026-03-19 18:56:20] ID_LIKE="rhel fedora"
[2026-03-19 18:56:20] VERSION_ID="7"
[2026-03-19 18:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 18:56:20] ANSI_COLOR="0;31"
[2026-03-19 18:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 18:56:20] HOME_URL="https://www.centos.org/"
[2026-03-19 18:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 18:56:20] 
[2026-03-19 18:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 18:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 18:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 18:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 18:56:20] 
[2026-03-19 18:56:20] 2026-03-19 22:55:35,924 | INFO     | **************************************
[2026-03-19 18:56:20] 2026-03-19 22:55:36,427 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 18:56:20] 2026-03-19 22:55:36,444 | INFO     | sufficient remaining disk space (29342302208 B)
[2026-03-19 18:56:20] 2026-03-19 22:55:36,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 18:56:20] 2026-03-19 22:55:36,445 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 18:56:20] 2026-03-19 22:55:36,445 | INFO     | update_server=False
[2026-03-19 18:56:20] 2026-03-19 22:55:36,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 18:56:20] 2026-03-19 22:55:36,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 18:56:20] 2026-03-19 22:55:36,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 18:56:20] 2026-03-19 22:55:36,825 | INFO     | all payload control threads have been joined
[2026-03-19 18:56:20] 2026-03-19 22:55:36,921 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-19 18:56:20] 2026-03-19 22:55:36,921 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-19 18:56:20] 2026-03-19 22:55:36,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 18:56:20] 2026-03-19 22:55:36,921 | INFO     | will abort loop
[2026-03-19 18:56:20] 2026-03-19 22:55:37,055 | INFO     | all data control threads have been joined
[2026-03-19 18:56:20] 2026-03-19 22:55:37,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 18:56:20] 2026-03-19 22:55:37,451 | INFO     | [job] retrieve thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:37,451 | INFO     | [job] queue monitor thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:37,481 | INFO     | [data] copytool_in thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:37,615 | INFO     | [payload] validate_post thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:37,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:37,713 | INFO     | all job control threads have been joined
[2026-03-19 18:56:20] 2026-03-19 22:55:37,831 | INFO     | [payload] control thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:37,924 | INFO     | [job] job monitor thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:38,056 | INFO     | [data] control thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:38,211 | INFO     | [job] validate thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:38,272 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:38,451 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:38,560 | INFO     | [payload] failed_post thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:38,718 | INFO     | [job] control thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:38,723 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:39,118 | INFO     | [data] copytool_out thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:55:40,452 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 18:56:20] 2026-03-19 22:56:06,059 | INFO     | PID=17077 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 18:56:20] 2026-03-19 22:56:06,059 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 18:56:20] 2026-03-19 22:56:06,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 18:56:20] 2026-03-19 22:56:06,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 18:56:20] 2026-03-19 22:56:13,563 | INFO     | [monitor] cgroup control has ended
[2026-03-19 18:56:20] 2026-03-19 22:56:14,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745441732416)>', '<ExcThread(monitor, started 139744864360192)>']
[2026-03-19 18:56:20] 2026-03-19 22:56:15,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 18:56:20] 2026-03-19 22:56:15,106 | INFO     | [monitor] control thread has ended
[2026-03-19 18:56:20] 2026-03-19 22:56:19,744 | INFO     | all workflow threads have been joined
[2026-03-19 18:56:20] 2026-03-19 22:56:19,744 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 18:56:20] 2026-03-19 22:56:19,745 | INFO     | traces error code: 0
[2026-03-19 18:56:20] 2026-03-19 22:56:19,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 18:56:20] 2026-03-19 22:56:19,846 [wrapper] ==== pilot stdout END ====
[2026-03-19 18:56:20] 2026-03-19 22:56:19,850 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 18:56:20] 2026-03-19 22:56:19,854 [wrapper] pilotpid: 17077
[2026-03-19 18:56:20] 2026-03-19 22:56:19,857 [wrapper] Pilot exit status: 0
[2026-03-19 18:56:20] 2026-03-19 22:56:19,873 [wrapper] pandaids: 7050046577
[2026-03-19 18:56:20] 2026-03-19 22:56:19,914 [wrapper] cleanup supervisor_pilot 10940 17078
[2026-03-19 18:56:20] 2026-03-19 22:56:19,918 [wrapper] Test setup, not cleaning
[2026-03-19 18:56:20] 2026-03-19 22:56:19,922 [wrapper] apfmon messages muted
[2026-03-19 18:56:20] 2026-03-19 22:56:19,926 [wrapper] ==== wrapper stdout END ====
[2026-03-19 18:56:20] 2026-03-19 22:56:19,930 [wrapper] ==== wrapper stderr END ====
[2026-03-19 18:56:20]  *** Error codes and diagnostics ***
[2026-03-19 18:56:20]     "exeErrorCode": 0,
[2026-03-19 18:56:20]     "exeErrorDiag": "",
[2026-03-19 18:56:20]     "pilotErrorCode": 0,
[2026-03-19 18:56:20]     "pilotErrorDiag": "",
[2026-03-19 18:56:20]  *** Listing of results directory ***
[2026-03-19 18:56:20] total 407796
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas    585013 Mar 11 13:00 pilot3.tar.gz
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas      5111 Mar 11 13:28 queuedata.json
[2026-03-19 18:56:20] -rwx------ 1 boincer umatlas     36322 Mar 11 13:29 runpilot2-wrapper.sh
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas       100 Mar 19 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 18:56:20] -rwxr-xr-x 1 boincer umatlas      7986 Mar 19 17:31 run_atlas
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas       105 Mar 19 17:31 job.xml
[2026-03-19 18:56:20] -rw-r--r-- 2 boincer umatlas 211954359 Mar 19 17:31 EVNT.48967083._000441.pool.root.1
[2026-03-19 18:56:20] drwxrwx--x 2 boincer umatlas      4096 Mar 19 17:31 shared
[2026-03-19 18:56:20] -rw-r--r-- 2 boincer umatlas    597523 Mar 19 17:31 input.tar.gz
[2026-03-19 18:56:20] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 17:31 start_atlas.sh
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas         0 Mar 19 17:31 boinc_lockfile
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas      2570 Mar 19 17:31 pandaJob.out
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas        57 Mar 19 17:31 setup.sh.local
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas   1010740 Mar 19 17:31 agis_schedconf.cvmfs.json
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas   1511579 Mar 19 17:32 agis_ddmendpoints.agis.ALL.json
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas       445 Mar 19 17:32 workernode_map.json
[2026-03-19 18:56:20] drwx------ 5 boincer umatlas      4096 Mar 19 17:32 pilot3
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas      5953 Mar 19 18:46 init_data.xml
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas 199486699 Mar 19 18:54 HITS.48967085._010471.pool.root.1
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas        95 Mar 19 18:55 pilot_heartbeat.json
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas      1046 Mar 19 18:55 memory_monitor_summary.json
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas       529 Mar 19 18:55 boinc_task_state.xml
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas    376964 Mar 19 18:55 log.48967085._010471.job.log.tgz.1
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas      6424 Mar 19 18:55 heartbeat.json
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas      8192 Mar 19 18:56 boinc_mmap_file
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas        27 Mar 19 18:56 wrapper_checkpoint.txt
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas      4928 Mar 19 18:56 pilotlog.txt
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas    723483 Mar 19 18:56 log.48967085._010471.job.log.1
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas       357 Mar 19 18:56 output.list
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas       620 Mar 19 18:56 runtime_log
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas   1116160 Mar 19 18:56 result.tar.gz
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas       659 Mar 19 18:56 SoMMDmrXcK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTTkLDmg3YuXo.diag
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas      9343 Mar 19 18:56 runtime_log.err
[2026-03-19 18:56:20] -rw-r--r-- 1 boincer umatlas     21379 Mar 19 18:56 stderr.txt
[2026-03-19 18:56:20] HITS file was successfully produced:
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas 199486699 Mar 19 18:54 shared/HITS.pool.root.1
[2026-03-19 18:56:20]  *** Contents of shared directory: ***
[2026-03-19 18:56:20] total 403496
[2026-03-19 18:56:20] -rw-r--r-- 2 boincer umatlas 211954359 Mar 19 17:31 ATLAS.root_0
[2026-03-19 18:56:20] -rw-r--r-- 2 boincer umatlas    597523 Mar 19 17:31 input.tar.gz
[2026-03-19 18:56:20] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 17:31 start_atlas.sh
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas 199486699 Mar 19 18:54 HITS.pool.root.1
[2026-03-19 18:56:20] -rw------- 1 boincer umatlas   1116160 Mar 19 18:56 result.tar.gz
18:56:21 (13021): run_atlas exited; CPU time 54159.987761
18:56:21 (13021): called boinc_finish(0)

</stderr_txt>
]]>

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