Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:14 (23480): wrapper (7.7.26015): starting
17:21:14 (23480): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 17:21:14] Arguments: --nthreads 8
[2026-03-19 17:21:14] Threads: 8
[2026-03-19 17:21:14] Checking for CVMFS
[2026-03-19 17:21:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 17:21:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 17:21:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 17:21:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 17:21:15] 2.11.2.0 2830 212117 89168 157472 3 1 14320956 20275201 1 130560 0 54515966 99.849 13741984 26411 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-19 17:21:15] CVMFS is ok
[2026-03-19 17:21:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 17:21:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 17:21:15] Further information can be found at the LHC@home message board.
[2026-03-19 17:21:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 17:21:15] Checking for apptainer binary...
[2026-03-19 17:21:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 17:21:15] Running /usr/bin/apptainer --version
[2026-03-19 17:21:15] apptainer version 1.3.2-1.el7
[2026-03-19 17:21:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 17:21:17] c-204-5.aglt2.org
[2026-03-19 17:21:17] apptainer works
[2026-03-19 17:21:17] Set ATHENA_PROC_NUMBER=8
[2026-03-19 17:21:17] Set ATHENA_CORE_NUMBER=8
[2026-03-19 17:21:17] Starting ATLAS job with PandaID=7050046985
[2026-03-19 17:21:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:45:37 (11621): wrapper (7.7.26015): starting
17:45:37 (11621): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 17:45:37] Arguments: --nthreads 8
[2026-03-19 17:45:37] Threads: 8
[2026-03-19 17:45:37] This job has been restarted, cleaning up previous attempt
[2026-03-19 17:45:37] Checking for CVMFS
[2026-03-19 17:45:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 17:45:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 17:45:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 17:45:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 17:45:38] 2.11.2.0 2830 212142 85784 157472 3 188 14367124 20275201 1 130560 0 54581275 99.849 13743536 26410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-19 17:45:38] CVMFS is ok
[2026-03-19 17:45:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 17:45:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 17:45:38] Further information can be found at the LHC@home message board.
[2026-03-19 17:45:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 17:45:38] Checking for apptainer binary...
[2026-03-19 17:45:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 17:45:38] Running /usr/bin/apptainer --version
[2026-03-19 17:45:38] apptainer version 1.3.2-1.el7
[2026-03-19 17:45:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 17:45:40] c-204-5.aglt2.org
[2026-03-19 17:45:40] apptainer works
[2026-03-19 17:45:40] Set ATHENA_PROC_NUMBER=8
[2026-03-19 17:45:40] Set ATHENA_CORE_NUMBER=8
[2026-03-19 17:45:40] Starting ATLAS job with PandaID=7050046985
[2026-03-19 17:45:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 20:18:19]  *** The last 200 lines of the pilot log: ***
[2026-03-19 20:18:19] 2026-03-20 00:17:31,758 | INFO     | log transfer has been attempted: DONE
[2026-03-19 20:18:19] 2026-03-20 00:17:31,758 | INFO     | job 7050046985 has finished - writing final server update
[2026-03-19 20:18:19] 2026-03-20 00:17:31,758 | INFO     | total number of processed events: 400 (read)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,760 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050046985/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,760 | INFO     | extracted standard info from prmon json
[2026-03-19 20:18:19] 2026-03-20 00:17:31,760 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 20:18:19] 2026-03-20 00:17:31,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 20:18:19] 2026-03-20 00:17:31,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 20:18:19] 2026-03-20 00:17:31,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 20:18:19] 2026-03-20 00:17:31,764 | INFO     | fitting pss+swap vs Time
[2026-03-19 20:18:19] 2026-03-20 00:17:31,764 | INFO     | sum of square deviations: 1025693650.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,765 | INFO     | sum of deviations: -10437522547.000004
[2026-03-19 20:18:19] 2026-03-20 00:17:31,765 | INFO     | mean x: 1773961307.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,765 | INFO     | mean y: 2502213.11409396
[2026-03-19 20:18:19] 2026-03-20 00:17:31,766 | INFO     | intersect: 18054443101.42718
[2026-03-19 20:18:19] 2026-03-20 00:17:31,766 | INFO     | chi2: 2.5064381543619962
[2026-03-19 20:18:19] 2026-03-20 00:17:31,766 | INFO     | sum of square deviations: 925859220.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,767 | INFO     | sum of deviations: -48413808.99999834
[2026-03-19 20:18:19] 2026-03-20 00:17:31,767 | INFO     | mean x: 1773961154.5
[2026-03-19 20:18:19] 2026-03-20 00:17:31,767 | INFO     | mean y: 2517666.361111111
[2026-03-19 20:18:19] 2026-03-20 00:17:31,767 | INFO     | intersect: 95279302.96000953
[2026-03-19 20:18:19] 2026-03-20 00:17:31,767 | INFO     | chi2: 1.7124081328559542
[2026-03-19 20:18:19] 2026-03-20 00:17:31,768 | INFO     | current chi2=1.7124081328559542 (change=31.679617553067423 %)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,768 | INFO     | sum of square deviations: 832722590.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,769 | INFO     | sum of deviations: 109253013.00000302
[2026-03-19 20:18:19] 2026-03-20 00:17:31,769 | INFO     | mean x: 1773961002.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,769 | INFO     | mean y: 2517924.633093525
[2026-03-19 20:18:19] 2026-03-20 00:17:31,769 | INFO     | intersect: -230225352.34826514
[2026-03-19 20:18:19] 2026-03-20 00:17:31,769 | INFO     | chi2: 1.713016520991319
[2026-03-19 20:18:19] 2026-03-20 00:17:31,769 | INFO     | current chi2=1.713016520991319 (change=-0.03552822038693728 %)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,769 | INFO     | right removable region: 138
[2026-03-19 20:18:19] 2026-03-20 00:17:31,770 | INFO     | sum of square deviations: 925859220.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,770 | INFO     | sum of deviations: -33287290629.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,771 | INFO     | mean x: 1773961459.5
[2026-03-19 20:18:19] 2026-03-20 00:17:31,771 | INFO     | mean y: 2536568.763888889
[2026-03-19 20:18:19] 2026-03-20 00:17:31,771 | INFO     | intersect: 63781531681.02459
[2026-03-19 20:18:19] 2026-03-20 00:17:31,771 | INFO     | chi2: 0.9775122565577121
[2026-03-19 20:18:19] 2026-03-20 00:17:31,771 | INFO     | current chi2=0.9775122565577121 (change=60.999945087153606 %)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,772 | INFO     | sum of square deviations: 832722590.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,772 | INFO     | sum of deviations: -30544570504.000004
[2026-03-19 20:18:19] 2026-03-20 00:17:31,772 | INFO     | mean x: 1773961612.0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,772 | INFO     | mean y: 2532008.2517985613
[2026-03-19 20:18:19] 2026-03-20 00:17:31,773 | INFO     | intersect: 65072095605.80413
[2026-03-19 20:18:19] 2026-03-20 00:17:31,773 | INFO     | chi2: 0.967471039511304
[2026-03-19 20:18:19] 2026-03-20 00:17:31,773 | INFO     | current chi2=0.967471039511304 (change=1.0272216004501131 %)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,773 | INFO     | left removable region: 20
[2026-03-19 20:18:19] 2026-03-20 00:17:31,773 | INFO     | sum of square deviations: 509440249.5
[2026-03-19 20:18:19] 2026-03-20 00:17:31,774 | INFO     | sum of deviations: -10996485829.499998
[2026-03-19 20:18:19] 2026-03-20 00:17:31,774 | INFO     | mean x: 1773961581.5
[2026-03-19 20:18:19] 2026-03-20 00:17:31,774 | INFO     | mean y: 2533644.194915254
[2026-03-19 20:18:19] 2026-03-20 00:17:31,774 | INFO     | intersect: 38294253649.019844
[2026-03-19 20:18:19] 2026-03-20 00:17:31,775 | INFO     | chi2: 0.10808921166516361
[2026-03-19 20:18:19] 2026-03-20 00:17:31,775 | INFO     | current memory leak: -21.59 B/s (using 118 data points, chi2=0.11)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,775 | INFO     | could have reported an average CPU frequency of 1695 MHz (9 samples)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,775 | INFO     | ..............................
[2026-03-19 20:18:19] 2026-03-20 00:17:31,775 | INFO     | . Timing measurements:
[2026-03-19 20:18:19] 2026-03-20 00:17:31,775 | INFO     | . get job = 0 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,775 | INFO     | . initial setup = 1 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,776 | INFO     | . payload setup = 16 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,776 | INFO     | . stage-in = 0 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,776 | INFO     | . payload execution = 9058 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,776 | INFO     | . stage-out = 0 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,776 | INFO     | . log creation = 0 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,776 | INFO     | ..............................
[2026-03-19 20:18:19] 2026-03-20 00:17:31,858 | INFO     | 
[2026-03-19 20:18:19] 2026-03-20 00:17:31,858 | INFO     | job summary report
[2026-03-19 20:18:19] 2026-03-20 00:17:31,858 | INFO     | --------------------------------------------------
[2026-03-19 20:18:19] 2026-03-20 00:17:31,859 | INFO     | PanDA job id: 7050046985
[2026-03-19 20:18:19] 2026-03-20 00:17:31,859 | INFO     | task id: 48967085
[2026-03-19 20:18:19] 2026-03-20 00:17:31,859 | INFO     | errors: (none)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,859 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 20:18:19] 2026-03-20 00:17:31,859 | INFO     | pilot state: finished 
[2026-03-19 20:18:19] 2026-03-20 00:17:31,859 | INFO     | transexitcode: 0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,859 | INFO     | exeerrorcode: 0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | exeerrordiag: 
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | exitcode: 0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | exitmsg: OK
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | cpuconsumptiontime: 65975 s
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | nevents: 400
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | neventsw: 0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | pid: 18204
[2026-03-19 20:18:19] 2026-03-20 00:17:31,860 | INFO     | pgrp: 18204
[2026-03-19 20:18:19] 2026-03-20 00:17:31,861 | INFO     | corecount: 8
[2026-03-19 20:18:19] 2026-03-20 00:17:31,861 | INFO     | event service: False
[2026-03-19 20:18:19] 2026-03-20 00:17:31,861 | INFO     | sizes: {0: 2280182, 1: 2280242, 11: 2280270, 9079: 2308664, 9080: 2317718, 9081: 2317920}
[2026-03-19 20:18:19] 2026-03-20 00:17:31,861 | INFO     | --------------------------------------------------
[2026-03-19 20:18:19] 2026-03-20 00:17:31,861 | INFO     | 
[2026-03-19 20:18:19] 2026-03-20 00:17:31,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 20:18:19] 2026-03-20 00:17:31,888 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,889 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,889 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,889 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,891 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,892 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 20:18:19] 2026-03-20 00:17:31,892 | INFO     | job 7050046985 has completed (purged errors)
[2026-03-19 20:18:19] 2026-03-20 00:17:31,892 | INFO     | overall cleanup function is called
[2026-03-19 20:18:19] 2026-03-20 00:17:32,483 | INFO     | PID=15681 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 20:18:19] 2026-03-20 00:17:32,901 | INFO     | --- collectZombieJob: --- 10, [18204]
[2026-03-19 20:18:19] 2026-03-20 00:17:32,901 | INFO     | zombie collector waiting for pid 18204
[2026-03-19 20:18:19] 2026-03-20 00:17:32,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 20:18:19] 2026-03-20 00:17:32,901 | INFO     | collected zombie processes
[2026-03-19 20:18:19] 2026-03-20 00:17:32,901 | INFO     | will attempt to kill all subprocesses of pid=18204
[2026-03-19 20:18:19] 2026-03-20 00:17:32,993 | INFO     | process IDs to be killed: [18204] (in reverse order)
[2026-03-19 20:18:19] 2026-03-20 00:17:33,048 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 20:18:19] 2026-03-20 00:17:33,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 20:18:19] 2026-03-20 00:17:33,053 | INFO     | did not find any defunct processes belonging to 18204
[2026-03-19 20:18:19] 2026-03-20 00:17:33,056 | INFO     | did not find any defunct processes belonging to 18204
[2026-03-19 20:18:19] 2026-03-20 00:17:33,057 | INFO     | ready for new job
[2026-03-19 20:18:19] 2026-03-20 00:17:33,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 20:18:19] 2026-03-20 00:17:33,059 | INFO     | **************************************
[2026-03-19 20:18:19] 2026-03-20 00:17:33,059 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 20:18:19] 2026-03-20 00:17:33,059 | INFO     | **************************************
[2026-03-19 20:18:19] 2026-03-20 00:17:33,059 | INFO     | 
[2026-03-19 20:18:19] 2026-03-20 00:17:33,060 | INFO     | architecture information:
[2026-03-19 20:18:19] 2026-03-20 00:17:33,061 | INFO     | executing command: cat /etc/os-release
[2026-03-19 20:18:19] 2026-03-20 00:17:33,080 | INFO     | cat /etc/os-release:
[2026-03-19 20:18:19] NAME="CentOS Linux"
[2026-03-19 20:18:19] VERSION="7 (Core)"
[2026-03-19 20:18:19] ID="centos"
[2026-03-19 20:18:19] ID_LIKE="rhel fedora"
[2026-03-19 20:18:19] VERSION_ID="7"
[2026-03-19 20:18:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 20:18:19] ANSI_COLOR="0;31"
[2026-03-19 20:18:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 20:18:19] HOME_URL="https://www.centos.org/"
[2026-03-19 20:18:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 20:18:19] 
[2026-03-19 20:18:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 20:18:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 20:18:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 20:18:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 20:18:19] 
[2026-03-19 20:18:19] 2026-03-20 00:17:33,080 | INFO     | **************************************
[2026-03-19 20:18:19] 2026-03-20 00:17:33,583 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 20:18:19] 2026-03-20 00:17:33,602 | INFO     | sufficient remaining disk space (18571329536 B)
[2026-03-19 20:18:19] 2026-03-20 00:17:33,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 20:18:19] 2026-03-20 00:17:33,602 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 20:18:19] 2026-03-20 00:17:33,602 | INFO     | update_server=False
[2026-03-19 20:18:19] 2026-03-20 00:17:33,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 20:18:19] 2026-03-20 00:17:33,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 20:18:19] 2026-03-20 00:17:33,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 20:18:19] 2026-03-20 00:17:33,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 20:18:19] 2026-03-20 00:17:33,604 | INFO     | aborting loop
[2026-03-19 20:18:19] 2026-03-20 00:17:33,606 | INFO     | all data control threads have been joined
[2026-03-19 20:18:19] 2026-03-20 00:17:33,902 | INFO     | all payload control threads have been joined
[2026-03-19 20:18:19] 2026-03-20 00:17:34,527 | INFO     | all job control threads have been joined
[2026-03-19 20:18:19] 2026-03-20 00:17:34,603 | INFO     | [job] retrieve thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:34,610 | INFO     | [job] queue monitor thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:34,610 | INFO     | [job] job monitor thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:34,612 | INFO     | [data] control thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:34,888 | INFO     | [job] validate thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:34,902 | INFO     | [payload] control thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,021 | INFO     | [payload] failed_post thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,069 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,072 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,402 | INFO     | [payload] validate_post thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,532 | INFO     | [job] control thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,610 | INFO     | [data] copytool_out thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,916 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:35,924 | INFO     | [data] copytool_in thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:36,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 20:18:19] 2026-03-20 00:17:40,926 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:17:44,570 | INFO     | job.realtimelogging is not enabled
[2026-03-19 20:18:19] 2026-03-20 00:17:45,576 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 20:18:19] 2026-03-20 00:18:04,662 | INFO     | PID=15681 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 20:18:19] 2026-03-20 00:18:04,663 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 20:18:19] 2026-03-20 00:18:04,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 20:18:19] 2026-03-20 00:18:04,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 20:18:19] 2026-03-20 00:18:13,831 | INFO     | [monitor] cgroup control has ended
[2026-03-19 20:18:19] 2026-03-20 00:18:13,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719074170688)>', '<ExcThread(monitor, started 139718322788096)>']
[2026-03-19 20:18:19] 2026-03-20 00:18:14,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 20:18:19] 2026-03-20 00:18:14,703 | INFO     | [monitor] control thread has ended
[2026-03-19 20:18:19] 2026-03-20 00:18:18,978 | INFO     | all workflow threads have been joined
[2026-03-19 20:18:19] 2026-03-20 00:18:18,978 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 20:18:19] 2026-03-20 00:18:18,985 | INFO     | traces error code: 0
[2026-03-19 20:18:19] 2026-03-20 00:18:18,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 20:18:19] 2026-03-20 00:18:19,084 [wrapper] ==== pilot stdout END ====
[2026-03-19 20:18:19] 2026-03-20 00:18:19,088 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 20:18:19] 2026-03-20 00:18:19,093 [wrapper] pilotpid: 15681
[2026-03-19 20:18:19] 2026-03-20 00:18:19,097 [wrapper] Pilot exit status: 0
[2026-03-19 20:18:19] 2026-03-20 00:18:19,115 [wrapper] pandaids: 7050046985 7050046985
[2026-03-19 20:18:19] 2026-03-20 00:18:19,156 [wrapper] cleanup supervisor_pilot  8535 15682
[2026-03-19 20:18:19] 2026-03-20 00:18:19,161 [wrapper] Test setup, not cleaning
[2026-03-19 20:18:19] 2026-03-20 00:18:19,165 [wrapper] apfmon messages muted
[2026-03-19 20:18:19] 2026-03-20 00:18:19,169 [wrapper] ==== wrapper stdout END ====
[2026-03-19 20:18:19] 2026-03-20 00:18:19,173 [wrapper] ==== wrapper stderr END ====
[2026-03-19 20:18:19]  *** Error codes and diagnostics ***
[2026-03-19 20:18:19]     "exeErrorCode": 0,
[2026-03-19 20:18:19]     "exeErrorDiag": "",
[2026-03-19 20:18:19]     "pilotErrorCode": 0,
[2026-03-19 20:18:19]     "pilotErrorDiag": "",
[2026-03-19 20:18:19]  *** Listing of results directory ***
[2026-03-19 20:18:19] total 613248
[2026-03-19 20:18:19] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas    585013 Mar 11 13:00 pilot3.tar.gz
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas      5111 Mar 11 13:28 queuedata.json
[2026-03-19 20:18:19] -rwx------ 1 boincer umatlas     36322 Mar 11 13:29 runpilot2-wrapper.sh
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas       100 Mar 19 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 20:18:19] -rwxr-xr-x 1 boincer umatlas      7986 Mar 19 17:21 run_atlas
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas       105 Mar 19 17:21 job.xml
[2026-03-19 20:18:19] -rw-r--r-- 3 boincer umatlas 212897156 Mar 19 17:21 EVNT.48967083._000449.pool.root.1
[2026-03-19 20:18:19] -rw-r--r-- 3 boincer umatlas 212897156 Mar 19 17:21 ATLAS.root_0
[2026-03-19 20:18:19] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 17:21 start_atlas.sh
[2026-03-19 20:18:19] drwxrwx--x 2 boincer umatlas      4096 Mar 19 17:21 shared
[2026-03-19 20:18:19] -rw-r--r-- 2 boincer umatlas    597529 Mar 19 17:21 input.tar.gz
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas         0 Mar 19 17:21 boinc_lockfile
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas   1511579 Mar 19 17:21 agis_ddmendpoints.agis.ALL.json
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas      2563 Mar 19 17:45 pandaJob.out
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas        57 Mar 19 17:45 setup.sh.local
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas   1010740 Mar 19 17:45 agis_schedconf.cvmfs.json
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas       432 Mar 19 17:45 workernode_map.json
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas      5909 Mar 19 20:12 init_data.xml
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas 194901706 Mar 19 20:16 HITS.48967085._010653.pool.root.1
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas       530 Mar 19 20:17 boinc_task_state.xml
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas      1047 Mar 19 20:17 memory_monitor_summary.json
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas    385763 Mar 19 20:17 log.48967085._010653.job.log.tgz.1
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas      6401 Mar 19 20:17 heartbeat.json
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas      8192 Mar 19 20:17 boinc_mmap_file
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas        28 Mar 19 20:17 wrapper_checkpoint.txt
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas        96 Mar 19 20:18 pilot_heartbeat.json
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas      4814 Mar 19 20:18 pilotlog.txt
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas   1278809 Mar 19 20:18 log.48967085._010653.job.log.1
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas       357 Mar 19 20:18 output.list
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas       620 Mar 19 20:18 runtime_log
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas   1679360 Mar 19 20:18 result.tar.gz
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas      9421 Mar 19 20:18 runtime_log.err
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas       784 Mar 19 20:18 BLTKDmsXcK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgUkLDmmuyujn.diag
[2026-03-19 20:18:19] -rw-r--r-- 1 boincer umatlas     23253 Mar 19 20:18 stderr.txt
[2026-03-19 20:18:19] HITS file was successfully produced:
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas 194901706 Mar 19 20:16 shared/HITS.pool.root.1
[2026-03-19 20:18:19]  *** Contents of shared directory: ***
[2026-03-19 20:18:19] total 400488
[2026-03-19 20:18:19] -rw-r--r-- 3 boincer umatlas 212897156 Mar 19 17:21 ATLAS.root_0
[2026-03-19 20:18:19] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 17:21 start_atlas.sh
[2026-03-19 20:18:19] -rw-r--r-- 2 boincer umatlas    597529 Mar 19 17:21 input.tar.gz
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas 194901706 Mar 19 20:16 HITS.pool.root.1
[2026-03-19 20:18:19] -rw------- 1 boincer umatlas   1679360 Mar 19 20:18 result.tar.gz
20:18:20 (11621): run_atlas exited; CPU time 65845.492555
20:18:20 (11621): called boinc_finish(0)

</stderr_txt>
]]>

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