Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:52:38 (2601306): wrapper (7.7.26015): starting
09:52:38 (2601306): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 09:52:38] Arguments: --nthreads 12
[2026-03-20 09:52:38] Threads: 12
[2026-03-20 09:52:38] Checking for CVMFS
[2026-03-20 09:52:38] No cvmfs_config command found, will try listing directly
[2026-03-20 09:52:38] CVMFS is ok
[2026-03-20 09:52:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 09:52:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 09:52:38] Further information can be found at the LHC@home message board.
[2026-03-20 09:52:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 09:52:38] Checking for apptainer binary...
[2026-03-20 09:52:38] which: no apptainer in ((null))
[2026-03-20 09:52:38] apptainer is not installed, using version from CVMFS
[2026-03-20 09:52:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 09:52:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-20 09:52:38] apptainer works
[2026-03-20 09:52:38] Set ATHENA_PROC_NUMBER=12
[2026-03-20 09:52:38] Set ATHENA_CORE_NUMBER=12
[2026-03-20 09:52:38] Starting ATLAS job with PandaID=7057893254
[2026-03-20 09:52:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 10:38:41]  *** The last 200 lines of the pilot log: ***
[2026-03-20 10:38:41]  guid=cea14930-fb83-4160-9415-eb731c466fad
[2026-03-20 10:38:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-20 10:38:41]  is_altstaged=None
[2026-03-20 10:38:41]  is_tar=False
[2026-03-20 10:38:41]  lfn=log.49191964._000014.job.log.tgz.1
[2026-03-20 10:38:41]  mtime=0
[2026-03-20 10:38:41]  protocol_id=None
[2026-03-20 10:38:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 10:38:41]  replicas=None
[2026-03-20 10:38:41]  scope=mc23_13p6TeV
[2026-03-20 10:38:41]  status=None
[2026-03-20 10:38:41]  status_code=0
[2026-03-20 10:38:41]  storage_token=
[2026-03-20 10:38:41]  surl=/var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057893254/log.49191964._000014.job.log.tgz.1
[2026-03-20 10:38:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/fd/log.49191964._000014.job.log.tgz.1
[2026-03-20 10:38:41]  workdir=None
[2026-03-20 10:38:41] ]
[2026-03-20 10:38:41] 2026-03-20 09:33:05,147 | INFO     | transferring file log.49191964._000014.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057893254/log.49191964._000014.job.log.tgz.1 to /var/lib/
[2026-03-20 10:38:41] 2026-03-20 09:33:05,147 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057893254/log.49191964._000014.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/1/
[2026-03-20 10:38:41] 2026-03-20 09:33:05,159 | INFO     | adding to output.list: log.49191964._000014.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/fd/log.49191964._000014.job.log.tg
[2026-03-20 10:38:41] 2026-03-20 09:33:05,159 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 10:38:41] 2026-03-20 09:33:05,159 | INFO     | summary of transferred files:
[2026-03-20 10:38:41] 2026-03-20 09:33:05,159 | INFO     |  -- lfn=log.49191964._000014.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 10:38:41] 2026-03-20 09:33:05,159 | INFO     | stage-out finished correctly
[2026-03-20 10:38:41] 2026-03-20 09:33:05,187 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 10:38:41] 2026-03-20 09:33:05,363 | INFO     | time since job start (2417s) is within the limit (345600.0s)
[2026-03-20 10:38:41] 2026-03-20 09:33:05,909 | INFO     | monitor loop #182: job 0:7057893254 is in state 'finished'
[2026-03-20 10:38:41] 2026-03-20 09:33:05,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,246 | INFO     | job 7057893254 has state=finished
[2026-03-20 10:38:41] 2026-03-20 09:33:06,246 | INFO     | preparing for final server update for job 7057893254 in state='finished'
[2026-03-20 10:38:41] 2026-03-20 09:33:06,693 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,693 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057893254/jobReport.json
[2026-03-20 10:38:41] 2026-03-20 09:33:06,695 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/1/workernode_map.json
[2026-03-20 10:38:41] 2026-03-20 09:33:06,695 | INFO     | this job has now completed (state=finished)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,695 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,695 | INFO     | log transfer has been attempted: DONE
[2026-03-20 10:38:41] 2026-03-20 09:33:06,695 | INFO     | job 7057893254 has finished - writing final server update
[2026-03-20 10:38:41] 2026-03-20 09:33:06,695 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1807757/.job.ad'
[2026-03-20 10:38:41] 2026-03-20 09:33:06,695 | INFO     | total number of processed events: 400 (read)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,711 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057893254/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,712 | INFO     | extracted standard info from prmon json
[2026-03-20 10:38:41] 2026-03-20 09:33:06,712 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 10:38:41] 2026-03-20 09:33:06,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 10:38:41] 2026-03-20 09:33:06,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 10:38:41] 2026-03-20 09:33:06,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 10:38:41] 2026-03-20 09:33:06,712 | INFO     | fitting pss+swap vs Time
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | sum of square deviations: 11133232.0
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | sum of deviations: 141516827.9999999
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | mean x: 1773998069.0
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | mean y: 2715631.242424242
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | intersect: -22546942868.91323
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | chi2: 0.0004197392975908639
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | current memory leak: 12.71 B/s (using 33 data points, chi2=0.00)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | could have reported an average CPU frequency of 3654 MHz (5 samples)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | ..............................
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . Timing measurements:
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . get job = 0 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . initial setup = 3 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . payload setup = 5 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . stage-in = 0 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . payload execution = 2396 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . stage-out = 0 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | . log creation = 0 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,713 | INFO     | ..............................
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | 
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | job summary report
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | --------------------------------------------------
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | PanDA job id: 7057893254
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | task id: 49191964
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | errors: (none)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | pilot state: finished 
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | transexitcode: 0
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | exeerrorcode: 0
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | exeerrordiag: 
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | exitcode: 0
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | exitmsg: OK
[2026-03-20 10:38:41] 2026-03-20 09:33:06,762 | INFO     | cpuconsumptiontime: 26248 s
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | nevents: 400
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | neventsw: 0
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | pid: 2612083
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | pgrp: 2612083
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | corecount: 12
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | event service: False
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | sizes: {0: 2279846, 1: 2280307, 11: 2280307, 2405: 2305482, 2406: 2314560, 2407: 2314730}
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | --------------------------------------------------
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | 
[2026-03-20 10:38:41] 2026-03-20 09:33:06,763 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/1
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | job 7057893254 has completed (purged errors)
[2026-03-20 10:38:41] 2026-03-20 09:33:06,776 | INFO     | overall cleanup function is called
[2026-03-20 10:38:41] 2026-03-20 09:33:07,784 | INFO     | --- collectZombieJob: --- 10, [2612083]
[2026-03-20 10:38:41] 2026-03-20 09:33:07,784 | INFO     | zombie collector waiting for pid 2612083
[2026-03-20 10:38:41] 2026-03-20 09:33:07,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 10:38:41] 2026-03-20 09:33:07,784 | INFO     | collected zombie processes
[2026-03-20 10:38:41] 2026-03-20 09:33:07,784 | INFO     | will attempt to kill all subprocesses of pid=2612083
[2026-03-20 10:38:41] 2026-03-20 09:33:08,018 | INFO     | process IDs to be killed: [2612083] (in reverse order)
[2026-03-20 10:38:41] 2026-03-20 09:33:08,124 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 10:38:41] 2026-03-20 09:33:08,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 10:38:41] 2026-03-20 09:33:08,149 | INFO     | did not find any defunct processes belonging to 2612083
[2026-03-20 10:38:41] 2026-03-20 09:33:08,170 | INFO     | did not find any defunct processes belonging to 2612083
[2026-03-20 10:38:41] 2026-03-20 09:33:08,171 | INFO     | ready for new job
[2026-03-20 10:38:41] 2026-03-20 09:33:08,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 10:38:41] 2026-03-20 09:33:08,172 | INFO     | **************************************
[2026-03-20 10:38:41] 2026-03-20 09:33:08,172 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 10:38:41] 2026-03-20 09:33:08,172 | INFO     | **************************************
[2026-03-20 10:38:41] 2026-03-20 09:33:08,172 | INFO     | 
[2026-03-20 10:38:41] 2026-03-20 09:33:08,178 | INFO     | architecture information:
[2026-03-20 10:38:41] 2026-03-20 09:33:08,179 | INFO     | executing command: cat /etc/os-release
[2026-03-20 10:38:41] 2026-03-20 09:33:08,192 | INFO     | cat /etc/os-release:
[2026-03-20 10:38:41] NAME="CentOS Linux"
[2026-03-20 10:38:41] VERSION="7 (Core)"
[2026-03-20 10:38:41] ID="centos"
[2026-03-20 10:38:41] ID_LIKE="rhel fedora"
[2026-03-20 10:38:41] VERSION_ID="7"
[2026-03-20 10:38:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 10:38:41] ANSI_COLOR="0;31"
[2026-03-20 10:38:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 10:38:41] HOME_URL="https://www.centos.org/"
[2026-03-20 10:38:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 10:38:41] 
[2026-03-20 10:38:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 10:38:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 10:38:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 10:38:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 10:38:41] 
[2026-03-20 10:38:41] 2026-03-20 09:33:08,192 | INFO     | **************************************
[2026-03-20 10:38:41] 2026-03-20 09:33:08,695 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/1
[2026-03-20 10:38:41] 2026-03-20 09:33:08,710 | INFO     | sufficient remaining disk space (232393801728 B)
[2026-03-20 10:38:41] 2026-03-20 09:33:08,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 10:38:41] 2026-03-20 09:33:08,710 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 10:38:41] 2026-03-20 09:33:08,710 | INFO     | update_server=False
[2026-03-20 10:38:41] 2026-03-20 09:33:08,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 10:38:41] 2026-03-20 09:33:08,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 10:38:41] 2026-03-20 09:33:08,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 10:38:41] 2026-03-20 09:33:09,174 | INFO     | all job control threads have been joined
[2026-03-20 10:38:41] 2026-03-20 09:33:09,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 10:38:41] 2026-03-20 09:33:09,417 | INFO     | aborting loop
[2026-03-20 10:38:41] 2026-03-20 09:33:09,658 | INFO     | all data control threads have been joined
[2026-03-20 10:38:41] 2026-03-20 09:33:09,716 | INFO     | [job] retrieve thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:09,717 | INFO     | [job] queue monitor thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:09,867 | INFO     | [payload] failed_post thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,014 | INFO     | all payload control threads have been joined
[2026-03-20 10:38:41] 2026-03-20 09:33:10,080 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,180 | INFO     | [job] control thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,422 | INFO     | [job] job monitor thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,436 | INFO     | [payload] validate_post thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,518 | INFO     | [job] validate thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,662 | INFO     | [data] control thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,680 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,714 | INFO     | [data] copytool_out thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,780 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:10,957 | INFO     | [data] copytool_in thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:11,019 | INFO     | [payload] control thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:11,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 10:38:41] 2026-03-20 09:33:15,254 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:19,686 | INFO     | job.realtimelogging is not enabled
[2026-03-20 10:38:41] 2026-03-20 09:33:20,690 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 10:38:41] 2026-03-20 09:33:38,769 | INFO     | PID=2606152 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 10:38:41] 2026-03-20 09:33:38,769 | INFO     | .. there are 3 such processes running
[2026-03-20 10:38:41] 2026-03-20 09:33:38,769 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 10:38:41] 2026-03-20 09:33:38,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 10:38:41] 2026-03-20 09:33:38,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 10:38:41] 2026-03-20 09:33:51,702 | INFO     | [monitor] cgroup control has ended
[2026-03-20 10:38:41] 2026-03-20 09:33:51,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22680303773504)>', '<ExcThread(monitor, started 22680068966144)>']
[2026-03-20 10:38:41] 2026-03-20 09:33:52,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 10:38:41] 2026-03-20 09:33:52,840 | INFO     | [monitor] control thread has ended
[2026-03-20 10:38:41] 2026-03-20 09:33:56,913 | INFO     | all workflow threads have been joined
[2026-03-20 10:38:41] 2026-03-20 09:33:56,914 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 10:38:41] 2026-03-20 09:33:56,914 | INFO     | traces error code: 0
[2026-03-20 10:38:41] 2026-03-20 09:33:56,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 10:38:41] 2026-03-20 09:33:57,022 [wrapper] ==== pilot stdout END ====
[2026-03-20 10:38:41] 2026-03-20 09:33:57,025 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 10:38:41] 2026-03-20 09:33:57,028 [wrapper] pilotpid: 2606152
[2026-03-20 10:38:41] 2026-03-20 09:33:57,030 [wrapper] Pilot exit status: 0
[2026-03-20 10:38:41] 2026-03-20 09:33:57,037 [wrapper] pandaids: 7057893254
[2026-03-20 10:38:41] 2026-03-20 09:33:57,118 [wrapper] cleanup supervisor_pilot 2714979 2606153
[2026-03-20 10:38:41] 2026-03-20 09:33:57,121 [wrapper] Test setup, not cleaning
[2026-03-20 10:38:41] 2026-03-20 09:33:57,123 [wrapper] apfmon messages muted
[2026-03-20 10:38:41] 2026-03-20 09:33:57,124 [wrapper] ==== wrapper stdout END ====
[2026-03-20 10:38:41] 2026-03-20 09:33:57,126 [wrapper] ==== wrapper stderr END ====
[2026-03-20 10:38:41]  *** Error codes and diagnostics ***
[2026-03-20 10:38:41]     "exeErrorCode": 0,
[2026-03-20 10:38:41]     "exeErrorDiag": "",
[2026-03-20 10:38:41]     "pilotErrorCode": 0,
[2026-03-20 10:38:41]     "pilotErrorDiag": "",
[2026-03-20 10:38:41]  *** Listing of results directory ***
[2026-03-20 10:38:41] total 467996
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc    585013 Mar 18 02:12 pilot3.tar.gz
[2026-03-20 10:38:41] -rwx------. 1 boinc boinc     36322 Mar 18 02:13 runpilot2-wrapper.sh
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc      5111 Mar 18 02:14 queuedata.json
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc       100 Mar 20 09:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 10:38:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 09:08 run_atlas
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc       105 Mar 20 09:08 job.xml
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc      6711 Mar 20 09:52 init_data.xml
[2026-03-20 10:38:41] -rw-r--r--. 2 boinc boinc 252757689 Mar 20 09:52 EVNT.49129468._000001.pool.root.1
[2026-03-20 10:38:41] -rw-r--r--. 2 boinc boinc     15845 Mar 20 09:52 start_atlas.sh
[2026-03-20 10:38:41] drwxrwx--x. 2 boinc boinc      4096 Mar 20 09:52 shared
[2026-03-20 10:38:41] -rw-r--r--. 2 boinc boinc    597532 Mar 20 09:52 input.tar.gz
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc         0 Mar 20 09:52 boinc_lockfile
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc      2591 Mar 20 09:52 pandaJob.out
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc   1010740 Mar 20 09:52 agis_schedconf.cvmfs.json
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc   1511579 Mar 20 09:52 agis_ddmendpoints.agis.ALL.json
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc       445 Mar 20 09:52 workernode_map.json
[2026-03-20 10:38:41] drwx------. 5 boinc boinc      4096 Mar 20 09:52 pilot3
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc 221044688 Mar 20 10:32 HITS.49191964._000014.pool.root.1
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc      1027 Mar 20 10:33 memory_monitor_summary.json
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc       528 Mar 20 10:33 boinc_task_state.xml
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc    357063 Mar 20 10:33 log.49191964._000014.job.log.tgz.1
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc      6343 Mar 20 10:33 heartbeat.json
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc        95 Mar 20 10:33 pilot_heartbeat.json
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc      4902 Mar 20 10:33 pilotlog.txt
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc    385145 Mar 20 10:33 log.49191964._000014.job.log.1
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc       357 Mar 20 10:33 output.list
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc       620 Mar 20 10:33 runtime_log
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc    757760 Mar 20 10:33 result.tar.gz
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc       660 Mar 20 10:33 x1YMDmZeuM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfI1LDm4Uh8Bn.diag
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc      9223 Mar 20 10:33 runtime_log.err
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc      8192 Mar 20 10:38 boinc_mmap_file
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc        26 Mar 20 10:38 wrapper_checkpoint.txt
[2026-03-20 10:38:41] -rw-r--r--. 1 boinc boinc     21242 Mar 20 10:38 stderr.txt
[2026-03-20 10:38:41] HITS file was successfully produced:
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc 221044688 Mar 20 10:32 shared/HITS.pool.root.1
[2026-03-20 10:38:41]  *** Contents of shared directory: ***
[2026-03-20 10:38:41] total 464048
[2026-03-20 10:38:41] -rw-r--r--. 2 boinc boinc 252757689 Mar 20 09:52 ATLAS.root_0
[2026-03-20 10:38:41] -rw-r--r--. 2 boinc boinc     15845 Mar 20 09:52 start_atlas.sh
[2026-03-20 10:38:41] -rw-r--r--. 2 boinc boinc    597532 Mar 20 09:52 input.tar.gz
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc 221044688 Mar 20 10:32 HITS.pool.root.1
[2026-03-20 10:38:41] -rw-------. 1 boinc boinc    757760 Mar 20 10:33 result.tar.gz
10:38:43 (2601306): run_atlas exited; CPU time 26329.549580
10:38:43 (2601306): called boinc_finish(0)

</stderr_txt>
]]>

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