Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:04:49 (2871420): wrapper (7.7.26015): starting
11:04:49 (2871420): wrapper: running run_atlas (--nthreads 12)
[2026-03-20 11:04:49] Arguments: --nthreads 12
[2026-03-20 11:04:49] Threads: 12
[2026-03-20 11:04:49] Checking for CVMFS
[2026-03-20 11:04:49] No cvmfs_config command found, will try listing directly
[2026-03-20 11:04:49] CVMFS is ok
[2026-03-20 11:04:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 11:04:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 11:04:49] Further information can be found at the LHC@home message board.
[2026-03-20 11:04:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 11:04:49] Checking for apptainer binary...
[2026-03-20 11:04:49] which: no apptainer in ((null))
[2026-03-20 11:04:49] apptainer is not installed, using version from CVMFS
[2026-03-20 11:04:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 11:04:49] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-20 11:04:49] apptainer works
[2026-03-20 11:04:49] Set ATHENA_PROC_NUMBER=12
[2026-03-20 11:04:49] Set ATHENA_CORE_NUMBER=12
[2026-03-20 11:04:49] Starting ATLAS job with PandaID=7057274195
[2026-03-20 11:04:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 11:54:06]  *** The last 200 lines of the pilot log: ***
[2026-03-20 11:54:06]  mtime=0
[2026-03-20 11:54:06]  protocol_id=None
[2026-03-20 11:54:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 11:54:06]  replicas=None
[2026-03-20 11:54:06]  scope=mc23_13p6TeV
[2026-03-20 11:54:06]  status=None
[2026-03-20 11:54:06]  status_code=0
[2026-03-20 11:54:06]  storage_token=
[2026-03-20 11:54:06]  surl=/var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057274195/log.49180611._000195.job.log.tgz.1
[2026-03-20 11:54:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/19/log.49180611._000195.job.log.tgz.1
[2026-03-20 11:54:06]  workdir=None
[2026-03-20 11:54:06] ]
[2026-03-20 11:54:06] 2026-03-20 10:50:02,576 | INFO     | transferring file log.49180611._000195.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057274195/log.49180611._000195.job.log.tgz.1 to /var/lib/
[2026-03-20 11:54:06] 2026-03-20 10:50:02,576 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057274195/log.49180611._000195.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/1/
[2026-03-20 11:54:06] 2026-03-20 10:50:02,592 | INFO     | adding to output.list: log.49180611._000195.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/19/log.49180611._000195.job.log.tg
[2026-03-20 11:54:06] 2026-03-20 10:50:02,592 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 11:54:06] 2026-03-20 10:50:02,592 | INFO     | summary of transferred files:
[2026-03-20 11:54:06] 2026-03-20 10:50:02,592 | INFO     |  -- lfn=log.49180611._000195.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 11:54:06] 2026-03-20 10:50:02,592 | INFO     | stage-out finished correctly
[2026-03-20 11:54:06] 2026-03-20 10:50:03,968 | INFO     | PID=2876342 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 11:54:06] 2026-03-20 10:50:03,968 | INFO     | .. there are 4 such processes running
[2026-03-20 11:54:06] 2026-03-20 10:50:04,518 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 11:54:06] 2026-03-20 10:50:04,969 | INFO     | time since job start (2704s) is within the limit (345600.0s)
[2026-03-20 11:54:06] 2026-03-20 10:50:04,969 | INFO     | 2708s have passed since pilot start - server update state is 'RUNNING'
[2026-03-20 11:54:06] 2026-03-20 10:50:05,512 | WARNING  | process 2882689 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 11:54:06] 2026-03-20 10:50:05,513 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057274195/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:54:06] 2026-03-20 10:50:05,779 | INFO     | number of running child processes to parent process 2882689: 1
[2026-03-20 11:54:06] 2026-03-20 10:50:05,779 | INFO     | maximum number of monitored processes: 6
[2026-03-20 11:54:06] 2026-03-20 10:50:06,500 | INFO     | job 7057274195 has state=finished
[2026-03-20 11:54:06] 2026-03-20 10:50:06,500 | INFO     | preparing for final server update for job 7057274195 in state='finished'
[2026-03-20 11:54:06] 2026-03-20 10:50:06,500 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057274195/jobReport.json
[2026-03-20 11:54:06] 2026-03-20 10:50:06,501 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/1/workernode_map.json
[2026-03-20 11:54:06] 2026-03-20 10:50:06,502 | INFO     | this job has now completed (state=finished)
[2026-03-20 11:54:06] 2026-03-20 10:50:06,502 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 11:54:06] 2026-03-20 10:50:06,502 | INFO     | log transfer has been attempted: DONE
[2026-03-20 11:54:06] 2026-03-20 10:50:06,502 | INFO     | job 7057274195 has finished - writing final server update
[2026-03-20 11:54:06] 2026-03-20 10:50:06,502 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1807757/.job.ad'
[2026-03-20 11:54:06] 2026-03-20 10:50:06,502 | INFO     | total number of processed events: 400 (read)
[2026-03-20 11:54:06] 2026-03-20 10:50:06,518 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7057274195/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 11:54:06] 2026-03-20 10:50:06,518 | INFO     | extracted standard info from prmon json
[2026-03-20 11:54:06] 2026-03-20 10:50:06,518 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 11:54:06] 2026-03-20 10:50:06,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 11:54:06] 2026-03-20 10:50:06,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 11:54:06] 2026-03-20 10:50:06,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | fitting pss+swap vs Time
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | sum of square deviations: 15695178.0
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | sum of deviations: -2865373801.0
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | mean x: 1774002525.0
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | mean y: 2808652.8378378376
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | intersect: 323871729288.3889
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | chi2: 0.05872259806978405
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | current memory leak: -182.56 B/s (using 37 data points, chi2=0.06)
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | could have reported an average CPU frequency of 3638 MHz (5 samples)
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | ..............................
[2026-03-20 11:54:06] 2026-03-20 10:50:06,519 | INFO     | . Timing measurements:
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | . get job = 0 s
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | . initial setup = 4 s
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | . payload setup = 6 s
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | . stage-in = 0 s
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | . payload execution = 2681 s
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | . stage-out = 0 s
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | . log creation = 0 s
[2026-03-20 11:54:06] 2026-03-20 10:50:06,520 | INFO     | ..............................
[2026-03-20 11:54:06] 2026-03-20 10:50:06,974 | INFO     | time since job start (2706s) is within the limit (345600.0s)
[2026-03-20 11:54:06] 2026-03-20 10:50:07,034 | INFO     | 
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | job summary report
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | --------------------------------------------------
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | PanDA job id: 7057274195
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | task id: 49180611
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | errors: (none)
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | pilot state: finished 
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | transexitcode: 0
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | exeerrorcode: 0
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | exeerrordiag: 
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | exitcode: 0
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | exitmsg: OK
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | cpuconsumptiontime: 28986 s
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | nevents: 400
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | neventsw: 0
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | pid: 2882689
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | pgrp: 2882689
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | corecount: 12
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | event service: False
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | sizes: {0: 2279218, 1: 2280348, 11: 2280348, 2691: 2314637, 2693: 2314637, 2695: 2314863}
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | --------------------------------------------------
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | 
[2026-03-20 11:54:06] 2026-03-20 10:50:07,035 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/1
[2026-03-20 11:54:06] 2026-03-20 10:50:07,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | job 7057274195 has completed (purged errors)
[2026-03-20 11:54:06] 2026-03-20 10:50:07,054 | INFO     | overall cleanup function is called
[2026-03-20 11:54:06] 2026-03-20 10:50:08,060 | INFO     | --- collectZombieJob: --- 10, [2882689]
[2026-03-20 11:54:06] 2026-03-20 10:50:08,061 | INFO     | zombie collector waiting for pid 2882689
[2026-03-20 11:54:06] 2026-03-20 10:50:08,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 11:54:06] 2026-03-20 10:50:08,061 | INFO     | collected zombie processes
[2026-03-20 11:54:06] 2026-03-20 10:50:08,061 | INFO     | will attempt to kill all subprocesses of pid=2882689
[2026-03-20 11:54:06] 2026-03-20 10:50:08,397 | INFO     | process IDs to be killed: [2882689] (in reverse order)
[2026-03-20 11:54:06] 2026-03-20 10:50:08,535 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 11:54:06] 2026-03-20 10:50:08,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 11:54:06] 2026-03-20 10:50:08,560 | INFO     | did not find any defunct processes belonging to 2882689
[2026-03-20 11:54:06] 2026-03-20 10:50:08,584 | INFO     | did not find any defunct processes belonging to 2882689
[2026-03-20 11:54:06] 2026-03-20 10:50:08,584 | INFO     | ready for new job
[2026-03-20 11:54:06] 2026-03-20 10:50:08,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 11:54:06] 2026-03-20 10:50:08,586 | INFO     | **************************************
[2026-03-20 11:54:06] 2026-03-20 10:50:08,586 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 11:54:06] 2026-03-20 10:50:08,586 | INFO     | **************************************
[2026-03-20 11:54:06] 2026-03-20 10:50:08,586 | INFO     | 
[2026-03-20 11:54:06] 2026-03-20 10:50:08,591 | INFO     | architecture information:
[2026-03-20 11:54:06] 2026-03-20 10:50:08,592 | INFO     | executing command: cat /etc/os-release
[2026-03-20 11:54:06] 2026-03-20 10:50:08,606 | INFO     | cat /etc/os-release:
[2026-03-20 11:54:06] NAME="CentOS Linux"
[2026-03-20 11:54:06] VERSION="7 (Core)"
[2026-03-20 11:54:06] ID="centos"
[2026-03-20 11:54:06] ID_LIKE="rhel fedora"
[2026-03-20 11:54:06] VERSION_ID="7"
[2026-03-20 11:54:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 11:54:06] ANSI_COLOR="0;31"
[2026-03-20 11:54:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 11:54:06] HOME_URL="https://www.centos.org/"
[2026-03-20 11:54:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 11:54:06] 
[2026-03-20 11:54:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 11:54:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 11:54:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 11:54:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 11:54:06] 
[2026-03-20 11:54:06] 2026-03-20 10:50:08,606 | INFO     | **************************************
[2026-03-20 11:54:06] 2026-03-20 10:50:09,109 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/1
[2026-03-20 11:54:06] 2026-03-20 10:50:09,124 | INFO     | sufficient remaining disk space (230903775232 B)
[2026-03-20 11:54:06] 2026-03-20 10:50:09,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 11:54:06] 2026-03-20 10:50:09,124 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 11:54:06] 2026-03-20 10:50:09,124 | INFO     | update_server=False
[2026-03-20 11:54:06] 2026-03-20 10:50:09,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 11:54:06] 2026-03-20 10:50:09,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 11:54:06] 2026-03-20 10:50:09,205 | INFO     | all job control threads have been joined
[2026-03-20 11:54:06] 2026-03-20 10:50:09,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:54:06] 2026-03-20 10:50:09,288 | INFO     | aborting loop
[2026-03-20 11:54:06] 2026-03-20 10:50:09,342 | INFO     | all payload control threads have been joined
[2026-03-20 11:54:06] 2026-03-20 10:50:09,400 | INFO     | all data control threads have been joined
[2026-03-20 11:54:06] 2026-03-20 10:50:10,130 | INFO     | [job] retrieve thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:10,211 | INFO     | [job] control thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:10,293 | INFO     | [job] job monitor thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:10,348 | INFO     | [payload] control thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:10,405 | INFO     | [data] control thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:10,427 | INFO     | [payload] failed_post thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:10,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 11:54:06] 2026-03-20 10:50:10,616 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:11,027 | INFO     | [job] validate thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:11,105 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:11,129 | INFO     | [data] copytool_out thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:11,158 | INFO     | [payload] validate_post thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:11,197 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:11,384 | INFO     | [data] copytool_in thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:11,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 11:54:06] 2026-03-20 10:50:12,579 | INFO     | [job] queue monitor thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:14,571 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:19,546 | INFO     | job.realtimelogging is not enabled
[2026-03-20 11:54:06] 2026-03-20 10:50:20,551 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 11:54:06] 2026-03-20 10:50:40,484 | INFO     | PID=2876342 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 11:54:06] 2026-03-20 10:50:40,484 | INFO     | .. there are 4 such processes running
[2026-03-20 11:54:06] 2026-03-20 10:50:40,484 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 11:54:06] 2026-03-20 10:50:40,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 11:54:06] 2026-03-20 10:50:40,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 11:54:06] 2026-03-20 10:51:04,077 | INFO     | [monitor] cgroup control has ended
[2026-03-20 11:54:06] 2026-03-20 10:51:05,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23447745877824)>', '<ExcThread(monitor, started 23447507056384)>']
[2026-03-20 11:54:06] 2026-03-20 10:51:05,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 11:54:06] 2026-03-20 10:51:05,606 | INFO     | [monitor] control thread has ended
[2026-03-20 11:54:06] 2026-03-20 10:51:10,443 | INFO     | all workflow threads have been joined
[2026-03-20 11:54:06] 2026-03-20 10:51:10,443 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 11:54:06] 2026-03-20 10:51:10,443 | INFO     | traces error code: 0
[2026-03-20 11:54:06] 2026-03-20 10:51:10,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 11:54:06] 2026-03-20 10:51:10,545 [wrapper] ==== pilot stdout END ====
[2026-03-20 11:54:06] 2026-03-20 10:51:10,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 11:54:06] 2026-03-20 10:51:10,554 [wrapper] pilotpid: 2876342
[2026-03-20 11:54:06] 2026-03-20 10:51:10,556 [wrapper] Pilot exit status: 0
[2026-03-20 11:54:06] 2026-03-20 10:51:10,564 [wrapper] pandaids: 7057274195
[2026-03-20 11:54:06] 2026-03-20 10:51:10,676 [wrapper] cleanup supervisor_pilot 3006903 2876343
[2026-03-20 11:54:06] 2026-03-20 10:51:10,679 [wrapper] Test setup, not cleaning
[2026-03-20 11:54:06] 2026-03-20 10:51:10,682 [wrapper] apfmon messages muted
[2026-03-20 11:54:06] 2026-03-20 10:51:10,684 [wrapper] ==== wrapper stdout END ====
[2026-03-20 11:54:06] 2026-03-20 10:51:10,686 [wrapper] ==== wrapper stderr END ====
[2026-03-20 11:54:06]  *** Error codes and diagnostics ***
[2026-03-20 11:54:06]     "exeErrorCode": 0,
[2026-03-20 11:54:06]     "exeErrorDiag": "",
[2026-03-20 11:54:06]     "pilotErrorCode": 0,
[2026-03-20 11:54:06]     "pilotErrorDiag": "",
[2026-03-20 11:54:06]  *** Listing of results directory ***
[2026-03-20 11:54:06] total 445152
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc    585013 Mar 17 16:25 pilot3.tar.gz
[2026-03-20 11:54:06] -rwx------. 1 boinc boinc     36322 Mar 17 16:29 runpilot2-wrapper.sh
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc      5111 Mar 17 16:33 queuedata.json
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc       100 Mar 20 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 11:54:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 10:38 run_atlas
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc       105 Mar 20 10:38 job.xml
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc      6711 Mar 20 11:04 init_data.xml
[2026-03-20 11:54:06] -rw-r--r--. 2 boinc boinc 238732196 Mar 20 11:04 EVNT.49133535._000008.pool.root.1
[2026-03-20 11:54:06] -rw-r--r--. 2 boinc boinc     15845 Mar 20 11:04 start_atlas.sh
[2026-03-20 11:54:06] drwxrwx--x. 2 boinc boinc      4096 Mar 20 11:04 shared
[2026-03-20 11:54:06] -rw-r--r--. 2 boinc boinc    597539 Mar 20 11:04 input.tar.gz
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc         0 Mar 20 11:04 boinc_lockfile
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc      2619 Mar 20 11:04 pandaJob.out
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc   1010749 Mar 20 11:04 agis_schedconf.cvmfs.json
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc   1511579 Mar 20 11:04 agis_ddmendpoints.agis.ALL.json
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc       444 Mar 20 11:04 workernode_map.json
[2026-03-20 11:54:06] drwx------. 5 boinc boinc      4096 Mar 20 11:05 pilot3
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc       528 Mar 20 11:49 boinc_task_state.xml
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc 211590922 Mar 20 11:49 HITS.49180611._000195.pool.root.1
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc        95 Mar 20 11:49 pilot_heartbeat.json
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc      1029 Mar 20 11:49 memory_monitor_summary.json
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc    367472 Mar 20 11:50 log.49180611._000195.job.log.tgz.1
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc      6357 Mar 20 11:50 heartbeat.json
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc      4902 Mar 20 11:51 pilotlog.txt
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc    423665 Mar 20 11:51 log.49180611._000195.job.log.1
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc       357 Mar 20 11:51 output.list
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc       620 Mar 20 11:51 runtime_log
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc    808960 Mar 20 11:51 result.tar.gz
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc      9223 Mar 20 11:51 runtime_log.err
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc       662 Mar 20 11:51 cqmNDmjXlM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2b0LDmyKFqsn.diag
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc        26 Mar 20 11:53 wrapper_checkpoint.txt
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc      8192 Mar 20 11:54 boinc_mmap_file
[2026-03-20 11:54:06] -rw-r--r--. 1 boinc boinc      8250 Mar 20 11:54 stderr.txt
[2026-03-20 11:54:06] HITS file was successfully produced:
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc 211590922 Mar 20 11:49 shared/HITS.pool.root.1
[2026-03-20 11:54:06]  *** Contents of shared directory: ***
[2026-03-20 11:54:06] total 441172
[2026-03-20 11:54:06] -rw-r--r--. 2 boinc boinc 238732196 Mar 20 11:04 ATLAS.root_0
[2026-03-20 11:54:06] -rw-r--r--. 2 boinc boinc     15845 Mar 20 11:04 start_atlas.sh
[2026-03-20 11:54:06] -rw-r--r--. 2 boinc boinc    597539 Mar 20 11:04 input.tar.gz
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc 211590922 Mar 20 11:49 HITS.pool.root.1
[2026-03-20 11:54:06] -rw-------. 1 boinc boinc    808960 Mar 20 11:51 result.tar.gz
11:54:07 (2871420): run_atlas exited; CPU time 29073.754366
11:54:07 (2871420): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN