Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:21:40 (1832962): wrapper (7.7.26015): starting
16:21:40 (1832962): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 16:21:40] Arguments: --nthreads 8
[2026-03-19 16:21:40] Threads: 8
[2026-03-19 16:21:40] Checking for CVMFS
[2026-03-19 16:21:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 16:21:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 16:21:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 16:21:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 16:21:43] 2.13.3.0 7410 193198 666316 157471 0 71 13777820 25181185 28713 16776704 0 873332696 99.554 969145893 28771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 16:21:43] CVMFS is ok
[2026-03-19 16:21:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 16:21:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 16:21:43] Further information can be found at the LHC@home message board.
[2026-03-19 16:21:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 16:21:43] Checking for apptainer binary...
[2026-03-19 16:21:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 16:21:43] Running /usr/bin/apptainer --version
[2026-03-19 16:21:43] apptainer version 1.4.5-2.el9
[2026-03-19 16:21:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 16:21:44] c-16-37.aglt2.org
[2026-03-19 16:21:44] apptainer works
[2026-03-19 16:21:45] Set ATHENA_PROC_NUMBER=8
[2026-03-19 16:21:45] Set ATHENA_CORE_NUMBER=8
[2026-03-19 16:21:45] Starting ATLAS job with PandaID=7049940327
[2026-03-19 16:21:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 13:04:07]  *** The last 200 lines of the pilot log: ***
[2026-03-20 13:04:07] 2026-03-20 10:14:42,912 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7049940327/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 13:04:07] 2026-03-20 10:14:42,915 | INFO     | extracted standard info from prmon json
[2026-03-20 13:04:07] 2026-03-20 10:14:42,915 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 13:04:07] 2026-03-20 10:14:42,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 13:04:07] 2026-03-20 10:14:42,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 13:04:07] 2026-03-20 10:14:42,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 13:04:07] 2026-03-20 10:14:43,296 | INFO     | fitting pss+swap vs Time
[2026-03-20 13:04:07] 2026-03-20 10:14:43,298 | INFO     | sum of square deviations: 167861288136.91302
[2026-03-20 13:04:07] 2026-03-20 10:14:43,415 | INFO     | sum of deviations: 190699541602.01758
[2026-03-20 13:04:07] 2026-03-20 10:14:43,416 | INFO     | mean x: 1773976829.9067485
[2026-03-20 13:04:07] 2026-03-20 10:14:43,423 | INFO     | mean y: 2480445.3423312884
[2026-03-20 13:04:07] 2026-03-20 10:14:43,423 | INFO     | intersect: -2012853596.4165514
[2026-03-20 13:04:07] 2026-03-20 10:14:43,432 | INFO     | chi2: 10.61476412860209
[2026-03-20 13:04:07] 2026-03-20 10:14:43,460 | INFO     | sum of square deviations: 164790953630.2765
[2026-03-20 13:04:07] 2026-03-20 10:14:43,613 | INFO     | sum of deviations: 455678616000.58093
[2026-03-20 13:04:07] 2026-03-20 10:14:43,615 | INFO     | mean x: 1773976677.4123456
[2026-03-20 13:04:07] 2026-03-20 10:14:43,615 | INFO     | mean y: 2493603.641975309
[2026-03-20 13:04:07] 2026-03-20 10:14:43,615 | INFO     | intersect: -4902892398.275358
[2026-03-20 13:04:07] 2026-03-20 10:14:43,634 | INFO     | chi2: 6.83182723681921
[2026-03-20 13:04:07] 2026-03-20 10:14:43,635 | INFO     | current chi2=6.83182723681921 (change=35.638445150086184 %)
[2026-03-20 13:04:07] 2026-03-20 10:14:43,636 | INFO     | sum of square deviations: 161758244839.42365
[2026-03-20 13:04:07] 2026-03-20 10:14:43,816 | INFO     | sum of deviations: 560011788056.0583
[2026-03-20 13:04:07] 2026-03-20 10:14:43,817 | INFO     | mean x: 1773976524.9167702
[2026-03-20 13:04:07] 2026-03-20 10:14:43,817 | INFO     | mean y: 2498830.299378882
[2026-03-20 13:04:07] 2026-03-20 10:14:43,817 | INFO     | intersect: -6139059930.271387
[2026-03-20 13:04:07] 2026-03-20 10:14:43,871 | INFO     | monitor loop #2099: job 0:7049940327 is in state 'finished'
[2026-03-20 13:04:07] 2026-03-20 10:14:43,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-20 13:04:07] 2026-03-20 10:14:43,882 | INFO     | chi2: 5.368153370073197
[2026-03-20 13:04:07] 2026-03-20 10:14:43,882 | INFO     | current chi2=5.368153370073197 (change=21.42433958016005 %)
[2026-03-20 13:04:07] 2026-03-20 10:14:43,883 | INFO     | right removable region: 804
[2026-03-20 13:04:07] 2026-03-20 10:14:43,884 | INFO     | sum of square deviations: 164790502840.2765
[2026-03-20 13:04:07] 2026-03-20 10:14:44,024 | INFO     | sum of deviations: -59256813361.34556
[2026-03-20 13:04:07] 2026-03-20 10:14:44,024 | INFO     | mean x: 1773976982.4123456
[2026-03-20 13:04:07] 2026-03-20 10:14:44,024 | INFO     | mean y: 2492851.234567901
[2026-03-20 13:04:07] 2026-03-20 10:14:44,024 | INFO     | intersect: 640395043.0618441
[2026-03-20 13:04:07] 2026-03-20 10:14:44,025 | INFO     | chi2: 7.178288267523915
[2026-03-20 13:04:07] 2026-03-20 10:14:44,026 | INFO     | current chi2=7.178288267523915 (change=32.374491033845906 %)
[2026-03-20 13:04:07] 2026-03-20 10:14:44,054 | INFO     | sum of square deviations: 161757541023.08447
[2026-03-20 13:04:07] 2026-03-20 10:14:44,290 | INFO     | sum of deviations: -216554607479.34274
[2026-03-20 13:04:07] 2026-03-20 10:14:44,290 | INFO     | mean x: 1773977134.9142857
[2026-03-20 13:04:07] 2026-03-20 10:14:44,313 | INFO     | mean y: 2500757.0385093167
[2026-03-20 13:04:07] 2026-03-20 10:14:44,313 | INFO     | intersect: 2377431283.9180455
[2026-03-20 13:04:07] 2026-03-20 10:14:44,314 | INFO     | chi2: 5.864054250290546
[2026-03-20 13:04:07] 2026-03-20 10:14:44,314 | INFO     | current chi2=5.864054250290546 (change=18.30845973655363 %)
[2026-03-20 13:04:07] 2026-03-20 10:14:44,314 | INFO     | left removable region: 20
[2026-03-20 13:04:07] 2026-03-20 10:14:44,315 | INFO     | sum of square deviations: 149425923749.70926
[2026-03-20 13:04:07] 2026-03-20 10:14:44,627 | INFO     | sum of deviations: 44245771459.43625
[2026-03-20 13:04:07] 2026-03-20 10:14:44,664 | INFO     | mean x: 1773977104.4260204
[2026-03-20 13:04:07] 2026-03-20 10:14:44,664 | INFO     | mean y: 2525356.860969388
[2026-03-20 13:04:07] 2026-03-20 10:14:44,664 | INFO     | intersect: -522758232.2716619
[2026-03-20 13:04:07] 2026-03-20 10:14:44,665 | INFO     | chi2: 0.13762933233347446
[2026-03-20 13:04:07] 2026-03-20 10:14:44,666 | INFO     | current memory leak: 0.30 B/s (using 784 data points, chi2=0.14)
[2026-03-20 13:04:07] 2026-03-20 10:14:44,666 | INFO     | could have reported an average CPU frequency of 2765 MHz (31 samples)
[2026-03-20 13:04:07] 2026-03-20 10:14:44,667 | INFO     | ..............................
[2026-03-20 13:04:07] 2026-03-20 10:14:44,667 | INFO     | . Timing measurements:
[2026-03-20 13:04:07] 2026-03-20 10:14:44,667 | INFO     | . get job = 1 s
[2026-03-20 13:04:07] 2026-03-20 10:14:44,667 | INFO     | . initial setup = 58 s
[2026-03-20 13:04:07] 2026-03-20 10:14:44,667 | INFO     | . payload setup = 81 s
[2026-03-20 13:04:07] 2026-03-20 10:14:44,667 | INFO     | . stage-in = 0 s
[2026-03-20 13:04:07] 2026-03-20 10:14:44,688 | INFO     | . payload execution = 49703 s
[2026-03-20 13:04:07] 2026-03-20 10:14:44,688 | INFO     | . stage-out = 9 s
[2026-03-20 13:04:07] 2026-03-20 10:14:44,688 | INFO     | . log creation = 3 s
[2026-03-20 13:04:07] 2026-03-20 10:14:44,688 | INFO     | ..............................
[2026-03-20 13:04:07] 2026-03-20 10:14:45,510 | INFO     | PID=1838271 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-20 13:04:07] 2026-03-20 10:14:45,511 | INFO     | .. there are 52 such processes running
[2026-03-20 13:04:07] 2026-03-20 10:14:45,763 | INFO     | 
[2026-03-20 13:04:07] 2026-03-20 10:14:45,764 | INFO     | job summary report
[2026-03-20 13:04:07] 2026-03-20 10:14:45,764 | INFO     | --------------------------------------------------
[2026-03-20 13:04:07] 2026-03-20 10:14:45,764 | INFO     | PanDA job id: 7049940327
[2026-03-20 13:04:07] 2026-03-20 10:14:45,764 | INFO     | task id: 48967094
[2026-03-20 13:04:07] 2026-03-20 10:14:45,764 | INFO     | errors: (none)
[2026-03-20 13:04:07] 2026-03-20 10:14:45,764 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | pilot state: finished 
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | transexitcode: 0
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | exeerrorcode: 0
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | exeerrordiag: 
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | exitcode: 0
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | exitmsg: OK
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | cpuconsumptiontime: 62905 s
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | nevents: 400
[2026-03-20 13:04:07] 2026-03-20 10:14:45,765 | INFO     | neventsw: 0
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | pid: 1848539
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | pgrp: 1848539
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | corecount: 8
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | event service: False
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | sizes: {0: 2279733, 1: 2279789, 2: 2279902, 3: 2279902, 4: 2280278, 5: 2280306, 16: 2280490, 49790: 2325500, 49791: 2325499, 49802: 2334553, 49807: 2334609, 49812:
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | --------------------------------------------------
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | 
[2026-03-20 13:04:07] 2026-03-20 10:14:45,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-20 13:04:07] 2026-03-20 10:14:45,884 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,891 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,905 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 13:04:07] 2026-03-20 10:14:45,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,905 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 13:04:07] 2026-03-20 10:14:45,905 | INFO     | job 7049940327 has completed (purged errors)
[2026-03-20 13:04:07] 2026-03-20 10:14:45,905 | INFO     | overall cleanup function is called
[2026-03-20 13:04:07] 2026-03-20 10:14:46,950 | INFO     | --- collectZombieJob: --- 10, [1848539]
[2026-03-20 13:04:07] 2026-03-20 10:14:46,951 | INFO     | zombie collector waiting for pid 1848539
[2026-03-20 13:04:07] 2026-03-20 10:14:46,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 13:04:07] 2026-03-20 10:14:46,952 | INFO     | collected zombie processes
[2026-03-20 13:04:07] 2026-03-20 10:14:46,952 | INFO     | will attempt to kill all subprocesses of pid=1848539
[2026-03-20 13:04:07] 2026-03-20 10:14:51,204 | INFO     | process IDs to be killed: [1848539] (in reverse order)
[2026-03-20 13:04:07] 2026-03-20 10:14:53,193 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 13:04:07] 2026-03-20 10:14:53,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 13:04:07] 2026-03-20 10:14:53,419 | INFO     | did not find any defunct processes belonging to 1848539
[2026-03-20 13:04:07] 2026-03-20 10:14:53,439 | INFO     | did not find any defunct processes belonging to 1848539
[2026-03-20 13:04:07] 2026-03-20 10:14:53,440 | INFO     | ready for new job
[2026-03-20 13:04:07] 2026-03-20 10:14:53,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 13:04:07] 2026-03-20 10:14:53,443 | INFO     | **************************************
[2026-03-20 13:04:07] 2026-03-20 10:14:53,443 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 13:04:07] 2026-03-20 10:14:53,444 | INFO     | **************************************
[2026-03-20 13:04:07] 2026-03-20 10:14:53,444 | INFO     | 
[2026-03-20 13:04:07] 2026-03-20 10:14:53,446 | INFO     | architecture information:
[2026-03-20 13:04:07] 2026-03-20 10:14:53,453 | INFO     | executing command: cat /etc/os-release
[2026-03-20 13:04:07] 2026-03-20 10:14:53,617 | INFO     | cat /etc/os-release:
[2026-03-20 13:04:07] NAME="CentOS Linux"
[2026-03-20 13:04:07] VERSION="7 (Core)"
[2026-03-20 13:04:07] ID="centos"
[2026-03-20 13:04:07] ID_LIKE="rhel fedora"
[2026-03-20 13:04:07] VERSION_ID="7"
[2026-03-20 13:04:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 13:04:07] ANSI_COLOR="0;31"
[2026-03-20 13:04:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 13:04:07] HOME_URL="https://www.centos.org/"
[2026-03-20 13:04:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 13:04:07] 
[2026-03-20 13:04:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 13:04:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 13:04:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 13:04:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 13:04:07] 
[2026-03-20 13:04:07] 2026-03-20 10:14:53,617 | INFO     | **************************************
[2026-03-20 13:04:07] 2026-03-20 10:14:54,121 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-20 13:04:07] 2026-03-20 10:14:54,377 | INFO     | sufficient remaining disk space (62742593536 B)
[2026-03-20 13:04:07] 2026-03-20 10:14:54,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 13:04:07] 2026-03-20 10:14:54,377 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 13:04:07] 2026-03-20 10:14:54,377 | INFO     | update_server=False
[2026-03-20 13:04:07] 2026-03-20 10:14:54,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 13:04:07] 2026-03-20 10:14:54,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 13:04:07] 2026-03-20 10:14:54,449 | INFO     | all payload control threads have been joined
[2026-03-20 13:04:07] 2026-03-20 10:14:54,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 13:04:07] 2026-03-20 10:14:54,631 | INFO     | [monitor] cgroup control has ended
[2026-03-20 13:04:07] 2026-03-20 10:14:54,978 | INFO     | all job control threads have been joined
[2026-03-20 13:04:07] 2026-03-20 10:14:55,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 13:04:07] 2026-03-20 10:14:55,014 | INFO     | aborting loop
[2026-03-20 13:04:07] 2026-03-20 10:14:55,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 13:04:07] 2026-03-20 10:14:55,287 | INFO     | all data control threads have been joined
[2026-03-20 13:04:07] 2026-03-20 10:14:55,384 | INFO     | [job] retrieve thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,397 | INFO     | [job] validate thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,465 | INFO     | [payload] control thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,507 | INFO     | [job] queue monitor thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,515 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,532 | INFO     | [payload] validate_post thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,544 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,544 | INFO     | [data] copytool_in thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,545 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:55,996 | INFO     | [job] control thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:56,020 | INFO     | [job] job monitor thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:56,303 | INFO     | [data] control thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:56,308 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:56,389 | INFO     | [payload] failed_post thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:56,416 | INFO     | [data] copytool_out thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:14:59,136 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 13:04:07] 2026-03-20 10:15:01,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755407755072)>', '<ExcThread(monitor, started 139754905511680)>']
[2026-03-20 13:04:07] 2026-03-20 10:15:06,073 | INFO     | all workflow threads have been joined
[2026-03-20 13:04:07] 2026-03-20 10:15:06,074 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 13:04:07] 2026-03-20 10:15:06,074 | INFO     | traces error code: 0
[2026-03-20 13:04:07] 2026-03-20 10:15:06,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 13:04:07] 2026-03-20 10:15:22,624 | INFO     | PID=1838271 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 13:04:07] 2026-03-20 10:15:22,624 | INFO     | .. there are 52 such processes running
[2026-03-20 13:04:07] 2026-03-20 10:15:22,624 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 13:04:07] 2026-03-20 10:15:22,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 13:04:07] 2026-03-20 10:15:22,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 13:04:07] 2026-03-20 10:15:22,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 13:04:07] 2026-03-20 10:15:22,625 | INFO     | [monitor] control thread has ended
[2026-03-20 13:04:07] 2026-03-20 10:15:22,833 [wrapper] ==== pilot stdout END ====
[2026-03-20 13:04:07] 2026-03-20 10:15:22,866 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 13:04:07] 2026-03-20 10:15:22,895 [wrapper] pilotpid: 1838271
[2026-03-20 13:04:07] 2026-03-20 10:15:22,933 [wrapper] Pilot exit status: 0
[2026-03-20 13:04:07] 2026-03-20 10:15:23,087 [wrapper] pandaids: 7049940327
[2026-03-20 13:04:07] 2026-03-20 10:15:24,521 [wrapper] cleanup supervisor_pilot 4086469 1838272
[2026-03-20 13:04:07] 2026-03-20 10:15:24,563 [wrapper] Test setup, not cleaning
[2026-03-20 13:04:07] 2026-03-20 10:15:24,610 [wrapper] apfmon messages muted
[2026-03-20 13:04:07] 2026-03-20 10:15:24,665 [wrapper] ==== wrapper stdout END ====
[2026-03-20 13:04:07] 2026-03-20 10:15:24,781 [wrapper] ==== wrapper stderr END ====
[2026-03-20 13:04:07]  *** Error codes and diagnostics ***
[2026-03-20 13:04:07]     "exeErrorCode": 0,
[2026-03-20 13:04:07]     "exeErrorDiag": "",
[2026-03-20 13:04:07]     "pilotErrorCode": 0,
[2026-03-20 13:04:07]     "pilotErrorDiag": "",
[2026-03-20 13:04:07]  *** Listing of results directory ***
[2026-03-20 13:04:07] total 429012
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 12:23 pilot3.tar.gz
[2026-03-20 13:04:07] -rwx------. 1 boincer umatlas     36322 Mar 11 12:24 runpilot2-wrapper.sh
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 12:24 queuedata.json
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas       100 Mar 19 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 13:04:07] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 16:21 run_atlas
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas       105 Mar 19 16:21 job.xml
[2026-03-20 13:04:07] -rw-r--r--. 2 boincer umatlas 217997934 Mar 19 16:21 EVNT.48967092._000031.pool.root.1
[2026-03-20 13:04:07] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 16:21 start_atlas.sh
[2026-03-20 13:04:07] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 16:21 shared
[2026-03-20 13:04:07] -rw-r--r--. 2 boincer umatlas    597528 Mar 19 16:21 input.tar.gz
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas         0 Mar 19 16:21 boinc_lockfile
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas      2596 Mar 19 16:21 pandaJob.out
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas        57 Mar 19 16:21 setup.sh.local
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas   1010740 Mar 19 16:23 agis_schedconf.cvmfs.json
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas       441 Mar 19 16:24 workernode_map.json
[2026-03-20 13:04:07] drwx------. 5 boincer umatlas      4096 Mar 19 16:24 pilot3
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas 205898506 Mar 20 06:07 HITS.48967094._002769.pool.root.1
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas       531 Mar 20 06:07 boinc_task_state.xml
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas      1040 Mar 20 06:14 memory_monitor_summary.json
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas   1511579 Mar 20 06:14 agis_ddmendpoints.agis.ALL.json
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas        95 Mar 20 06:14 pilot_heartbeat.json
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas    814430 Mar 20 06:14 log.48967094._002769.job.log.tgz.1
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas      6386 Mar 20 06:14 heartbeat.json
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas       823 Mar 20 06:15 pilotlog.txt
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas   4922856 Mar 20 06:15 log.48967094._002769.job.log.1
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas       357 Mar 20 06:15 output.list
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas       620 Mar 20 06:15 runtime_log
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas   5754880 Mar 20 06:15 result.tar.gz
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas      9337 Mar 20 06:15 runtime_log.err
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas       657 Mar 20 06:15 q6MNDm8WbK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFVhLDmlxioBn.diag
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas      6614 Mar 20 13:03 init_data.xml
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas      8192 Mar 20 13:03 boinc_mmap_file
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas        28 Mar 20 13:04 wrapper_checkpoint.txt
[2026-03-20 13:04:07] -rw-r--r--. 1 boincer umatlas     21322 Mar 20 13:04 stderr.txt
[2026-03-20 13:04:07] HITS file was successfully produced:
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas 205898506 Mar 20 06:07 shared/HITS.pool.root.1
[2026-03-20 13:04:07]  *** Contents of shared directory: ***
[2026-03-20 13:04:07] total 420192
[2026-03-20 13:04:07] -rw-r--r--. 2 boincer umatlas 217997934 Mar 19 16:21 ATLAS.root_0
[2026-03-20 13:04:07] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 16:21 start_atlas.sh
[2026-03-20 13:04:07] -rw-r--r--. 2 boincer umatlas    597528 Mar 19 16:21 input.tar.gz
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas 205898506 Mar 20 06:07 HITS.pool.root.1
[2026-03-20 13:04:07] -rw-------. 1 boincer umatlas   5754880 Mar 20 06:15 result.tar.gz
13:04:09 (1832962): run_atlas exited; CPU time 65530.119507
13:04:09 (1832962): called boinc_finish(0)

</stderr_txt>
]]>

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