Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:18:48 (750445): wrapper (7.7.26015): starting
16:18:48 (750445): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 16:18:48] Arguments: --nthreads 8
[2026-03-19 16:18:48] Threads: 8
[2026-03-19 16:18:48] Checking for CVMFS
[2026-03-19 16:18:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 16:18:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 16:18:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 16:18:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 16:18:48] 2.13.3.0 779065 116758 119372 157471 1 1 34623319 39288832 0 16776704 0 136334352 99.986 4988289 25193 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-19 16:18:48] CVMFS is ok
[2026-03-19 16:18:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 16:18:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 16:18:48] Further information can be found at the LHC@home message board.
[2026-03-19 16:18:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 16:18:48] Checking for apptainer binary...
[2026-03-19 16:18:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 16:18:48] Running /usr/bin/apptainer --version
[2026-03-19 16:18:48] apptainer version 1.4.5-2.el9
[2026-03-19 16:18:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 16:18:48] c-210-16.aglt2.org
[2026-03-19 16:18:48] apptainer works
[2026-03-19 16:18:48] Set ATHENA_PROC_NUMBER=8
[2026-03-19 16:18:48] Set ATHENA_CORE_NUMBER=8
[2026-03-19 16:18:48] Starting ATLAS job with PandaID=7049995610
[2026-03-19 16:18:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 17:27:30]  *** The last 200 lines of the pilot log: ***
[2026-03-19 17:27:30]  is_altstaged=None
[2026-03-19 17:27:30]  is_tar=False
[2026-03-19 17:27:30]  lfn=log.48967030._004019.job.log.tgz.1
[2026-03-19 17:27:30]  mtime=0
[2026-03-19 17:27:30]  protocol_id=None
[2026-03-19 17:27:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 17:27:30]  replicas=None
[2026-03-19 17:27:30]  scope=mc23_13p6TeV
[2026-03-19 17:27:30]  status=None
[2026-03-19 17:27:30]  status_code=0
[2026-03-19 17:27:30]  storage_token=
[2026-03-19 17:27:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7049995610/log.48967030._004019.job.log.tgz.1
[2026-03-19 17:27:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/ad/log.48967030._004019.job.log.tgz.1
[2026-03-19 17:27:30]  workdir=None
[2026-03-19 17:27:30] ]
[2026-03-19 17:27:30] 2026-03-19 21:26:52,456 | INFO     | transferring file log.48967030._004019.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7049995610/log.48967030._004019.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-19 17:27:30] 2026-03-19 21:26:52,456 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7049995610/log.48967030._004019.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967030._004019.job
[2026-03-19 17:27:30] 2026-03-19 21:26:52,467 | INFO     | adding to output.list: log.48967030._004019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/ad/log.48967030._004019.job.log.tg
[2026-03-19 17:27:30] 2026-03-19 21:26:52,468 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 17:27:30] 2026-03-19 21:26:52,468 | INFO     | summary of transferred files:
[2026-03-19 17:27:30] 2026-03-19 21:26:52,468 | INFO     |  -- lfn=log.48967030._004019.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 17:27:30] 2026-03-19 21:26:52,468 | INFO     | stage-out finished correctly
[2026-03-19 17:27:30] 2026-03-19 21:26:53,308 | INFO     | time since job start (4075s) is within the limit (345600.0s)
[2026-03-19 17:27:30] 2026-03-19 21:26:55,313 | INFO     | time since job start (4077s) is within the limit (345600.0s)
[2026-03-19 17:27:30] 2026-03-19 21:26:55,714 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 17:27:30] 2026-03-19 21:26:56,564 | WARNING  | process 764742 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 17:27:30] 2026-03-19 21:26:56,564 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049995610/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 17:27:30] 2026-03-19 21:26:56,670 | INFO     | number of running child processes to parent process 764742: 1
[2026-03-19 17:27:30] 2026-03-19 21:26:56,670 | INFO     | maximum number of monitored processes: 6
[2026-03-19 17:27:30] 2026-03-19 21:26:57,319 | INFO     | time since job start (4079s) is within the limit (345600.0s)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,170 | INFO     | job 7049995610 has state=finished
[2026-03-19 17:27:30] 2026-03-19 21:26:58,170 | INFO     | preparing for final server update for job 7049995610 in state='finished'
[2026-03-19 17:27:30] 2026-03-19 21:26:58,170 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7049995610/jobReport.json
[2026-03-19 17:27:30] 2026-03-19 21:26:58,173 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-19 17:27:30] 2026-03-19 21:26:58,173 | INFO     | this job has now completed (state=finished)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,173 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,173 | INFO     | log transfer has been attempted: DONE
[2026-03-19 17:27:30] 2026-03-19 21:26:58,173 | INFO     | job 7049995610 has finished - writing final server update
[2026-03-19 17:27:30] 2026-03-19 21:26:58,174 | INFO     | total number of processed events: 400 (read)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,180 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049995610/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,181 | INFO     | extracted standard info from prmon json
[2026-03-19 17:27:30] 2026-03-19 21:26:58,181 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 17:27:30] 2026-03-19 21:26:58,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 17:27:30] 2026-03-19 21:26:58,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 17:27:30] 2026-03-19 21:26:58,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 17:27:30] 2026-03-19 21:26:58,183 | INFO     | fitting pss+swap vs Time
[2026-03-19 17:27:30] 2026-03-19 21:26:58,183 | INFO     | sum of square deviations: 66959395.0
[2026-03-19 17:27:30] 2026-03-19 21:26:58,184 | INFO     | sum of deviations: -2284906219.0
[2026-03-19 17:27:30] 2026-03-19 21:26:58,184 | INFO     | mean x: 1773953661.5
[2026-03-19 17:27:30] 2026-03-19 21:26:58,184 | INFO     | mean y: 2703909.8666666667
[2026-03-19 17:27:30] 2026-03-19 21:26:58,184 | INFO     | intersect: 60536670105.0387
[2026-03-19 17:27:30] 2026-03-19 21:26:58,184 | INFO     | chi2: 0.03306259832828755
[2026-03-19 17:27:30] 2026-03-19 21:26:58,184 | INFO     | current memory leak: -34.12 B/s (using 60 data points, chi2=0.03)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | could have reported an average CPU frequency of 2881 MHz (6 samples)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | ..............................
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | . Timing measurements:
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | . get job = 0 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | . initial setup = 4 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | . payload setup = 5 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | . stage-in = 0 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | . payload execution = 4053 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,185 | INFO     | . stage-out = 0 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,186 | INFO     | . log creation = 0 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,186 | INFO     | ..............................
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | 
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | job summary report
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | --------------------------------------------------
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | PanDA job id: 7049995610
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | task id: 48967030
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | errors: (none)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | pilot state: finished 
[2026-03-19 17:27:30] 2026-03-19 21:26:58,259 | INFO     | transexitcode: 0
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | exeerrorcode: 0
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | exeerrordiag: 
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | exitcode: 0
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | exitmsg: OK
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | cpuconsumptiontime: 30354 s
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | nevents: 400
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | neventsw: 0
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | pid: 764742
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | pgrp: 764742
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | corecount: 8
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | event service: False
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | sizes: {0: 2280242, 11: 2280242, 4062: 2306220, 4063: 2315218, 4066: 2315274, 4069: 2315468}
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | --------------------------------------------------
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | 
[2026-03-19 17:27:30] 2026-03-19 21:26:58,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | job 7049995610 has completed (purged errors)
[2026-03-19 17:27:30] 2026-03-19 21:26:58,273 | INFO     | overall cleanup function is called
[2026-03-19 17:27:30] 2026-03-19 21:26:59,280 | INFO     | --- collectZombieJob: --- 10, [764742]
[2026-03-19 17:27:30] 2026-03-19 21:26:59,280 | INFO     | zombie collector waiting for pid 764742
[2026-03-19 17:27:30] 2026-03-19 21:26:59,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 17:27:30] 2026-03-19 21:26:59,280 | INFO     | collected zombie processes
[2026-03-19 17:27:30] 2026-03-19 21:26:59,281 | INFO     | will attempt to kill all subprocesses of pid=764742
[2026-03-19 17:27:30] 2026-03-19 21:26:59,389 | INFO     | process IDs to be killed: [764742] (in reverse order)
[2026-03-19 17:27:30] 2026-03-19 21:26:59,424 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 17:27:30] 2026-03-19 21:26:59,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 17:27:30] 2026-03-19 21:26:59,427 | INFO     | did not find any defunct processes belonging to 764742
[2026-03-19 17:27:30] 2026-03-19 21:26:59,429 | INFO     | did not find any defunct processes belonging to 764742
[2026-03-19 17:27:30] 2026-03-19 21:26:59,430 | INFO     | ready for new job
[2026-03-19 17:27:30] 2026-03-19 21:26:59,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 17:27:30] 2026-03-19 21:26:59,431 | INFO     | **************************************
[2026-03-19 17:27:30] 2026-03-19 21:26:59,431 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 17:27:30] 2026-03-19 21:26:59,431 | INFO     | **************************************
[2026-03-19 17:27:30] 2026-03-19 21:26:59,431 | INFO     | 
[2026-03-19 17:27:30] 2026-03-19 21:26:59,432 | INFO     | architecture information:
[2026-03-19 17:27:30] 2026-03-19 21:26:59,432 | INFO     | executing command: cat /etc/os-release
[2026-03-19 17:27:30] 2026-03-19 21:26:59,440 | INFO     | cat /etc/os-release:
[2026-03-19 17:27:30] NAME="CentOS Linux"
[2026-03-19 17:27:30] VERSION="7 (Core)"
[2026-03-19 17:27:30] ID="centos"
[2026-03-19 17:27:30] ID_LIKE="rhel fedora"
[2026-03-19 17:27:30] VERSION_ID="7"
[2026-03-19 17:27:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 17:27:30] ANSI_COLOR="0;31"
[2026-03-19 17:27:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 17:27:30] HOME_URL="https://www.centos.org/"
[2026-03-19 17:27:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 17:27:30] 
[2026-03-19 17:27:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 17:27:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 17:27:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 17:27:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 17:27:30] 
[2026-03-19 17:27:30] 2026-03-19 21:26:59,440 | INFO     | **************************************
[2026-03-19 17:27:30] 2026-03-19 21:26:59,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 17:27:30] 2026-03-19 21:26:59,952 | INFO     | sufficient remaining disk space (52770635776 B)
[2026-03-19 17:27:30] 2026-03-19 21:26:59,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 17:27:30] 2026-03-19 21:26:59,953 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 17:27:30] 2026-03-19 21:26:59,953 | INFO     | update_server=False
[2026-03-19 17:27:30] 2026-03-19 21:26:59,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 17:27:30] 2026-03-19 21:26:59,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 17:27:30] 2026-03-19 21:27:00,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 17:27:30] 2026-03-19 21:27:00,178 | INFO     | aborting loop
[2026-03-19 17:27:30] 2026-03-19 21:27:00,290 | INFO     | all job control threads have been joined
[2026-03-19 17:27:30] 2026-03-19 21:27:00,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 17:27:30] 2026-03-19 21:27:00,664 | INFO     | all data control threads have been joined
[2026-03-19 17:27:30] 2026-03-19 21:27:00,957 | INFO     | [job] retrieve thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:00,958 | INFO     | [job] queue monitor thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:01,009 | INFO     | [payload] validate_post thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:01,183 | INFO     | [job] job monitor thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:01,257 | INFO     | all payload control threads have been joined
[2026-03-19 17:27:30] 2026-03-19 21:27:01,295 | INFO     | [job] control thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:01,495 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:01,670 | INFO     | [data] control thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:01,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 17:27:30] 2026-03-19 21:27:02,059 | INFO     | [payload] failed_post thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:02,249 | INFO     | [data] copytool_in thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:02,262 | INFO     | [payload] control thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:02,292 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:02,316 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:02,327 | INFO     | [job] validate thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:02,534 | INFO     | [data] copytool_out thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:03,626 | INFO     | [monitor] cgroup control has ended
[2026-03-19 17:27:30] 2026-03-19 21:27:05,773 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:10,167 | INFO     | job.realtimelogging is not enabled
[2026-03-19 17:27:30] 2026-03-19 21:27:11,172 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 17:27:30] 2026-03-19 21:27:12,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988684248896)>', '<ExcThread(monitor, started 139988326926080)>']
[2026-03-19 17:27:30] 2026-03-19 21:27:17,142 | INFO     | all workflow threads have been joined
[2026-03-19 17:27:30] 2026-03-19 21:27:17,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 17:27:30] 2026-03-19 21:27:17,143 | INFO     | traces error code: 0
[2026-03-19 17:27:30] 2026-03-19 21:27:17,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 17:27:30] 2026-03-19 21:27:30,531 | INFO     | PID=754156 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-19 17:27:30] 2026-03-19 21:27:30,532 | INFO     | .. there are 2 such processes running
[2026-03-19 17:27:30] 2026-03-19 21:27:30,532 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 17:27:30] 2026-03-19 21:27:30,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 17:27:30] 2026-03-19 21:27:30,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 17:27:30] 2026-03-19 21:27:30,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 17:27:30] 2026-03-19 21:27:30,532 | INFO     | [monitor] control thread has ended
[2026-03-19 17:27:30] 2026-03-19 21:27:30,598 [wrapper] ==== pilot stdout END ====
[2026-03-19 17:27:30] 2026-03-19 21:27:30,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 17:27:30] 2026-03-19 21:27:30,601 [wrapper] pilotpid: 754156
[2026-03-19 17:27:30] 2026-03-19 21:27:30,602 [wrapper] Pilot exit status: 0
[2026-03-19 17:27:30] 2026-03-19 21:27:30,609 [wrapper] pandaids: 7049995610
[2026-03-19 17:27:30] 2026-03-19 21:27:30,634 [wrapper] cleanup supervisor_pilot  842087 754157
[2026-03-19 17:27:30] 2026-03-19 21:27:30,635 [wrapper] Test setup, not cleaning
[2026-03-19 17:27:30] 2026-03-19 21:27:30,637 [wrapper] apfmon messages muted
[2026-03-19 17:27:30] 2026-03-19 21:27:30,639 [wrapper] ==== wrapper stdout END ====
[2026-03-19 17:27:30] 2026-03-19 21:27:30,641 [wrapper] ==== wrapper stderr END ====
[2026-03-19 17:27:30]  *** Error codes and diagnostics ***
[2026-03-19 17:27:30]     "exeErrorCode": 0,
[2026-03-19 17:27:30]     "exeErrorDiag": "",
[2026-03-19 17:27:30]     "pilotErrorCode": 0,
[2026-03-19 17:27:30]     "pilotErrorDiag": "",
[2026-03-19 17:27:30]  *** Listing of results directory ***
[2026-03-19 17:27:30] total 405560
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 12:23 pilot3.tar.gz
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 12:26 queuedata.json
[2026-03-19 17:27:30] -rwx------. 1 boincer umatlas     36322 Mar 11 12:26 runpilot2-wrapper.sh
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas       100 Mar 19 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 17:27:30] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 16:18 run_atlas
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas       105 Mar 19 16:18 job.xml
[2026-03-19 17:27:30] -rw-r--r--. 2 boincer umatlas 214496829 Mar 19 16:18 EVNT.48967027._000160.pool.root.1
[2026-03-19 17:27:30] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 16:18 start_atlas.sh
[2026-03-19 17:27:30] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 16:18 shared
[2026-03-19 17:27:30] -rw-r--r--. 2 boincer umatlas    597512 Mar 19 16:18 input.tar.gz
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas         0 Mar 19 16:18 boinc_lockfile
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas      2565 Mar 19 16:18 pandaJob.out
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas        57 Mar 19 16:18 setup.sh.local
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas   1010740 Mar 19 16:18 agis_schedconf.cvmfs.json
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas   1511579 Mar 19 16:18 agis_ddmendpoints.agis.ALL.json
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas       442 Mar 19 16:18 workernode_map.json
[2026-03-19 17:27:30] drwx------. 5 boincer umatlas      4096 Mar 19 16:18 pilot3
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas      6663 Mar 19 17:20 init_data.xml
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas 194965030 Mar 19 17:26 HITS.48967030._004019.pool.root.1
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas       529 Mar 19 17:26 boinc_task_state.xml
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas        95 Mar 19 17:26 pilot_heartbeat.json
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas      1031 Mar 19 17:26 memory_monitor_summary.json
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas    327730 Mar 19 17:26 log.48967030._004019.job.log.tgz.1
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas      6369 Mar 19 17:26 heartbeat.json
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas      8192 Mar 19 17:27 boinc_mmap_file
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas        27 Mar 19 17:27 wrapper_checkpoint.txt
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas       821 Mar 19 17:27 pilotlog.txt
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas    615170 Mar 19 17:27 log.48967030._004019.job.log.1
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas       357 Mar 19 17:27 output.list
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas       620 Mar 19 17:27 runtime_log
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas    962560 Mar 19 17:27 result.tar.gz
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas      9341 Mar 19 17:27 runtime_log.err
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas       649 Mar 19 17:27 DkcKDmKZbK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCWhLDmX2Y9wn.diag
[2026-03-19 17:27:30] -rw-r--r--. 1 boincer umatlas     21453 Mar 19 17:27 stderr.txt
[2026-03-19 17:27:30] HITS file was successfully produced:
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas 194965030 Mar 19 17:26 shared/HITS.pool.root.1
[2026-03-19 17:27:30]  *** Contents of shared directory: ***
[2026-03-19 17:27:30] total 401416
[2026-03-19 17:27:30] -rw-r--r--. 2 boincer umatlas 214496829 Mar 19 16:18 ATLAS.root_0
[2026-03-19 17:27:30] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 16:18 start_atlas.sh
[2026-03-19 17:27:30] -rw-r--r--. 2 boincer umatlas    597512 Mar 19 16:18 input.tar.gz
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas 194965030 Mar 19 17:26 HITS.pool.root.1
[2026-03-19 17:27:30] -rw-------. 1 boincer umatlas    962560 Mar 19 17:27 result.tar.gz
17:27:32 (750445): run_atlas exited; CPU time 30411.192658
17:27:32 (750445): called boinc_finish(0)

</stderr_txt>
]]>

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