Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:03:04 (3216171): wrapper (7.7.26015): starting
22:03:04 (3216171): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 22:03:04] Arguments: --nthreads 8
[2026-03-19 22:03:04] Threads: 8
[2026-03-19 22:03:04] Checking for CVMFS
[2026-03-19 22:03:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 22:03:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 22:03:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 22:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 22:03:09] 2.13.3.0 9828 193540 356628 157479 0 70 28493089 32935937 23227 16776704 0 763528662 99.686 623753676 33025 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 22:03:09] CVMFS is ok
[2026-03-19 22:03:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 22:03:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 22:03:09] Further information can be found at the LHC@home message board.
[2026-03-19 22:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 22:03:09] Checking for apptainer binary...
[2026-03-19 22:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 22:03:09] Running /usr/bin/apptainer --version
[2026-03-19 22:03:09] apptainer version 1.4.5-2.el9
[2026-03-19 22:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 22:03:10] c-4-39.aglt2.org
[2026-03-19 22:03:10] apptainer works
[2026-03-19 22:03:11] Set ATHENA_PROC_NUMBER=8
[2026-03-19 22:03:11] Set ATHENA_CORE_NUMBER=8
[2026-03-19 22:03:11] Starting ATLAS job with PandaID=7056932720
[2026-03-19 22:03:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 14:28:02]  *** The last 200 lines of the pilot log: ***
[2026-03-21 14:28:02] 2026-03-21 18:27:24,891 | INFO     | preparing for final server update for job 7056932720 in state='finished'
[2026-03-21 14:28:02] 2026-03-21 18:27:24,891 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7056932720/jobReport.json
[2026-03-21 14:28:02] 2026-03-21 18:27:24,894 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-21 14:28:02] 2026-03-21 18:27:24,894 | INFO     | this job has now completed (state=finished)
[2026-03-21 14:28:02] 2026-03-21 18:27:24,894 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 14:28:02] 2026-03-21 18:27:24,923 | INFO     | log transfer has been attempted: DONE
[2026-03-21 14:28:02] 2026-03-21 18:27:24,924 | INFO     | job 7056932720 has finished - writing final server update
[2026-03-21 14:28:02] 2026-03-21 18:27:24,924 | INFO     | total number of processed events: 400 (read)
[2026-03-21 14:28:02] 2026-03-21 18:27:24,962 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7056932720/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 14:28:02] 2026-03-21 18:27:24,963 | INFO     | extracted standard info from prmon json
[2026-03-21 14:28:02] 2026-03-21 18:27:24,963 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 14:28:02] 2026-03-21 18:27:24,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 14:28:02] 2026-03-21 18:27:24,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-21 14:28:02] 2026-03-21 18:27:24,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-21 14:28:02] 2026-03-21 18:27:25,101 | INFO     | fitting pss+swap vs Time
[2026-03-21 14:28:02] 2026-03-21 18:27:25,104 | INFO     | sum of square deviations: 4175054944332.676
[2026-03-21 14:28:02] 2026-03-21 18:27:25,395 | INFO     | sum of deviations: 5722773799593.68
[2026-03-21 14:28:02] 2026-03-21 18:27:25,395 | INFO     | mean x: 1774045053.6124423
[2026-03-21 14:28:02] 2026-03-21 18:27:25,395 | INFO     | mean y: 2542307.3282891973
[2026-03-21 14:28:02] 2026-03-21 18:27:25,396 | INFO     | intersect: -2429152290.102878
[2026-03-21 14:28:02] 2026-03-21 18:27:25,407 | INFO     | chi2: 10.814778386799388
[2026-03-21 14:28:02] 2026-03-21 18:27:25,418 | INFO     | sum of square deviations: 4148785982807.748
[2026-03-21 14:28:02] 2026-03-21 18:27:25,608 | INFO     | time since job start (145286s) is within the limit (345600.0s)
[2026-03-21 14:28:02] 2026-03-21 18:27:26,206 | INFO     | monitor loop #7738: job 0:7056932720 is in state 'finished'
[2026-03-21 14:28:02] 2026-03-21 18:27:26,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-21 14:28:02] 2026-03-21 18:27:26,406 | INFO     | sum of deviations: 6040135568970.101
[2026-03-21 14:28:02] 2026-03-21 18:27:26,406 | INFO     | mean x: 1774044901.1128895
[2026-03-21 14:28:02] 2026-03-21 18:27:26,407 | INFO     | mean y: 2544147.398904802
[2026-03-21 14:28:02] 2026-03-21 18:27:26,407 | INFO     | intersect: -2580252784.6593175
[2026-03-21 14:28:02] 2026-03-21 18:27:26,414 | INFO     | chi2: 9.296693528280535
[2026-03-21 14:28:02] 2026-03-21 18:27:26,414 | INFO     | current chi2=9.296693528280535 (change=14.037133302443255 %)
[2026-03-21 14:28:02] 2026-03-21 18:27:26,415 | INFO     | right removable region: 2373
[2026-03-21 14:28:02] 2026-03-21 18:27:26,422 | INFO     | sum of square deviations: 4148785819144.967
[2026-03-21 14:28:02] 2026-03-21 18:27:26,621 | INFO     | sum of deviations: 4953279375227.228
[2026-03-21 14:28:02] 2026-03-21 18:27:26,622 | INFO     | mean x: 1774045206.1124685
[2026-03-21 14:28:02] 2026-03-21 18:27:26,622 | INFO     | mean y: 2546773.658382477
[2026-03-21 14:28:02] 2026-03-21 18:27:26,622 | INFO     | intersect: -2115504606.4845989
[2026-03-21 14:28:02] 2026-03-21 18:27:26,625 | INFO     | chi2: 7.21777462103574
[2026-03-21 14:28:02] 2026-03-21 18:27:26,626 | INFO     | current chi2=7.21777462103574 (change=33.26007835864841 %)
[2026-03-21 14:28:02] 2026-03-21 18:27:26,629 | INFO     | sum of square deviations: 4122627259568.4985
[2026-03-21 14:28:02] 2026-03-21 18:27:26,822 | INFO     | sum of deviations: 4427943466467.226
[2026-03-21 14:28:02] 2026-03-21 18:27:26,822 | INFO     | mean x: 1774045358.6120727
[2026-03-21 14:28:02] 2026-03-21 18:27:26,823 | INFO     | mean y: 2549835.9501899537
[2026-03-21 14:28:02] 2026-03-21 18:27:26,823 | INFO     | intersect: -1902878925.9275036
[2026-03-21 14:28:02] 2026-03-21 18:27:26,830 | INFO     | chi2: 5.632696514505497
[2026-03-21 14:28:02] 2026-03-21 18:27:26,830 | INFO     | current chi2=5.632696514505497 (change=21.960759233332592 %)
[2026-03-21 14:28:02] 2026-03-21 18:27:26,830 | INFO     | left removable region: 20
[2026-03-21 14:28:02] 2026-03-21 18:27:26,845 | INFO     | sum of square deviations: 4039659697995.4126
[2026-03-21 14:28:02] 2026-03-21 18:27:27,102 | INFO     | sum of deviations: 4061257277499.167
[2026-03-21 14:28:02] 2026-03-21 18:27:27,103 | INFO     | mean x: 1774045480.6107097
[2026-03-21 14:28:02] 2026-03-21 18:27:27,103 | INFO     | mean y: 2555734.2949426263
[2026-03-21 14:28:02] 2026-03-21 18:27:27,103 | INFO     | intersect: -1780974477.9949675
[2026-03-21 14:28:02] 2026-03-21 18:27:27,106 | INFO     | chi2: 2.735842805028411
[2026-03-21 14:28:02] 2026-03-21 18:27:27,107 | INFO     | current memory leak: 1.01 B/s (using 2353 data points, chi2=2.74)
[2026-03-21 14:28:02] 2026-03-21 18:27:27,108 | INFO     | could have reported an average CPU frequency of 2600 MHz (84 samples)
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | ..............................
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . Timing measurements:
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . get job = 1 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . initial setup = 61 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . payload setup = 92 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . stage-in = 1 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . payload execution = 145154 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . stage-out = 6 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,109 | INFO     | . log creation = 1 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,110 | INFO     | ..............................
[2026-03-21 14:28:02] 2026-03-21 18:27:27,331 | INFO     | 
[2026-03-21 14:28:02] 2026-03-21 18:27:27,332 | INFO     | job summary report
[2026-03-21 14:28:02] 2026-03-21 18:27:27,332 | INFO     | --------------------------------------------------
[2026-03-21 14:28:02] 2026-03-21 18:27:27,332 | INFO     | PanDA job id: 7056932720
[2026-03-21 14:28:02] 2026-03-21 18:27:27,332 | INFO     | task id: 49178139
[2026-03-21 14:28:02] 2026-03-21 18:27:27,332 | INFO     | errors: (none)
[2026-03-21 14:28:02] 2026-03-21 18:27:27,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | pilot state: finished 
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | transexitcode: 0
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | exeerrorcode: 0
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | exeerrordiag: 
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | exitcode: 0
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | exitmsg: OK
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | cpuconsumptiontime: 128099 s
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | nevents: 400
[2026-03-21 14:28:02] 2026-03-21 18:27:27,333 | INFO     | neventsw: 0
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | pid: 3232116
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | pgrp: 3232116
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | corecount: 8
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | event service: False
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | sizes: {0: 2279236, 2: 2279837, 3: 2279921, 5: 2279949, 6: 2280005, 7: 2280005, 9: 2280005, 11: 2280622, 22: 2280622, 145252: 2369241, 145253: 2369240, 145260: 237
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | --------------------------------------------------
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | 
[2026-03-21 14:28:02] 2026-03-21 18:27:27,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-21 14:28:02] 2026-03-21 18:27:27,433 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,433 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,433 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,433 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,435 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 14:28:02] 2026-03-21 18:27:27,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,435 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 14:28:02] 2026-03-21 18:27:27,435 | INFO     | job 7056932720 has completed (purged errors)
[2026-03-21 14:28:02] 2026-03-21 18:27:27,436 | INFO     | overall cleanup function is called
[2026-03-21 14:28:02] 2026-03-21 18:27:28,449 | INFO     | --- collectZombieJob: --- 10, [3232116]
[2026-03-21 14:28:02] 2026-03-21 18:27:28,450 | INFO     | zombie collector waiting for pid 3232116
[2026-03-21 14:28:02] 2026-03-21 18:27:28,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 14:28:02] 2026-03-21 18:27:28,450 | INFO     | collected zombie processes
[2026-03-21 14:28:02] 2026-03-21 18:27:28,450 | INFO     | will attempt to kill all subprocesses of pid=3232116
[2026-03-21 14:28:02] 2026-03-21 18:27:30,462 | INFO     | process IDs to be killed: [3232116] (in reverse order)
[2026-03-21 14:28:02] 2026-03-21 18:27:31,885 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 14:28:02] 2026-03-21 18:27:31,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 14:28:02] 2026-03-21 18:27:31,938 | INFO     | did not find any defunct processes belonging to 3232116
[2026-03-21 14:28:02] 2026-03-21 18:27:31,955 | INFO     | did not find any defunct processes belonging to 3232116
[2026-03-21 14:28:02] 2026-03-21 18:27:31,956 | INFO     | ready for new job
[2026-03-21 14:28:02] 2026-03-21 18:27:31,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 14:28:02] 2026-03-21 18:27:31,964 | INFO     | **************************************
[2026-03-21 14:28:02] 2026-03-21 18:27:31,965 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 14:28:02] 2026-03-21 18:27:31,965 | INFO     | **************************************
[2026-03-21 14:28:02] 2026-03-21 18:27:31,965 | INFO     | 
[2026-03-21 14:28:02] 2026-03-21 18:27:31,967 | INFO     | architecture information:
[2026-03-21 14:28:02] 2026-03-21 18:27:31,967 | INFO     | executing command: cat /etc/os-release
[2026-03-21 14:28:02] 2026-03-21 18:27:32,141 | INFO     | cat /etc/os-release:
[2026-03-21 14:28:02] NAME="CentOS Linux"
[2026-03-21 14:28:02] VERSION="7 (Core)"
[2026-03-21 14:28:02] ID="centos"
[2026-03-21 14:28:02] ID_LIKE="rhel fedora"
[2026-03-21 14:28:02] VERSION_ID="7"
[2026-03-21 14:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 14:28:02] ANSI_COLOR="0;31"
[2026-03-21 14:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 14:28:02] HOME_URL="https://www.centos.org/"
[2026-03-21 14:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 14:28:02] 
[2026-03-21 14:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 14:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 14:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 14:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 14:28:02] 
[2026-03-21 14:28:02] 2026-03-21 18:27:32,141 | INFO     | **************************************
[2026-03-21 14:28:02] 2026-03-21 18:27:32,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-21 14:28:02] 2026-03-21 18:27:32,715 | INFO     | sufficient remaining disk space (75569823744 B)
[2026-03-21 14:28:02] 2026-03-21 18:27:32,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 14:28:02] 2026-03-21 18:27:32,715 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 14:28:02] 2026-03-21 18:27:32,716 | INFO     | update_server=False
[2026-03-21 14:28:02] 2026-03-21 18:27:32,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 14:28:02] 2026-03-21 18:27:32,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 14:28:02] 2026-03-21 18:27:32,717 | INFO     | aborting loop
[2026-03-21 14:28:02] 2026-03-21 18:27:32,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 14:28:02] 2026-03-21 18:27:32,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 14:28:02] 2026-03-21 18:27:33,108 | INFO     | [monitor] cgroup control has ended
[2026-03-21 14:28:02] 2026-03-21 18:27:33,299 | INFO     | all data control threads have been joined
[2026-03-21 14:28:02] 2026-03-21 18:27:33,674 | INFO     | all payload control threads have been joined
[2026-03-21 14:28:02] 2026-03-21 18:27:33,722 | INFO     | [job] retrieve thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:33,723 | INFO     | [job] job monitor thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:33,747 | INFO     | [job] queue monitor thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:33,878 | INFO     | all job control threads have been joined
[2026-03-21 14:28:02] 2026-03-21 18:27:33,922 | INFO     | [payload] failed_post thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,178 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,305 | INFO     | [data] control thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,371 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,434 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,695 | INFO     | [payload] control thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,724 | INFO     | [data] copytool_out thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,730 | INFO     | [job] validate thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,752 | INFO     | [data] copytool_in thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,787 | INFO     | [payload] validate_post thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,830 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:34,884 | INFO     | [job] control thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:35,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 14:28:02] 2026-03-21 18:27:39,599 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 14:28:02] 2026-03-21 18:27:41,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771809949504)>', '<ExcThread(monitor, started 139771154249472)>']
[2026-03-21 14:28:02] 2026-03-21 18:27:46,508 | INFO     | all workflow threads have been joined
[2026-03-21 14:28:02] 2026-03-21 18:27:46,509 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 14:28:02] 2026-03-21 18:27:46,509 | INFO     | traces error code: 0
[2026-03-21 14:28:02] 2026-03-21 18:27:46,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 14:28:02] 2026-03-21 18:27:59,617 | INFO     | PID=3222865 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-21 14:28:02] 2026-03-21 18:27:59,617 | INFO     | .. there are 41 such processes running
[2026-03-21 14:28:02] 2026-03-21 18:27:59,621 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 14:28:02] 2026-03-21 18:27:59,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 14:28:02] 2026-03-21 18:27:59,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 14:28:02] 2026-03-21 18:27:59,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 14:28:02] 2026-03-21 18:27:59,622 | INFO     | [monitor] control thread has ended
[2026-03-21 14:28:02] 2026-03-21 18:28:00,066 [wrapper] ==== pilot stdout END ====
[2026-03-21 14:28:02] 2026-03-21 18:28:00,084 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 14:28:02] 2026-03-21 18:28:00,136 [wrapper] pilotpid: 3222865
[2026-03-21 14:28:02] 2026-03-21 18:28:00,138 [wrapper] Pilot exit status: 0
[2026-03-21 14:28:02] 2026-03-21 18:28:00,245 [wrapper] pandaids: 7056932720
[2026-03-21 14:28:02] 2026-03-21 18:28:00,498 [wrapper] cleanup supervisor_pilot 2324602 3222866
[2026-03-21 14:28:02] 2026-03-21 18:28:00,526 [wrapper] Test setup, not cleaning
[2026-03-21 14:28:02] 2026-03-21 18:28:00,558 [wrapper] apfmon messages muted
[2026-03-21 14:28:02] 2026-03-21 18:28:00,589 [wrapper] ==== wrapper stdout END ====
[2026-03-21 14:28:02] 2026-03-21 18:28:00,611 [wrapper] ==== wrapper stderr END ====
[2026-03-21 14:28:02]  *** Error codes and diagnostics ***
[2026-03-21 14:28:02]     "exeErrorCode": 0,
[2026-03-21 14:28:02]     "exeErrorDiag": "",
[2026-03-21 14:28:02]     "pilotErrorCode": 0,
[2026-03-21 14:28:02]     "pilotErrorDiag": "",
[2026-03-21 14:28:02]  *** Listing of results directory ***
[2026-03-21 14:28:02] total 501096
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 09:19 pilot3.tar.gz
[2026-03-21 14:28:02] -rwx------. 1 boincer umatlas     36322 Mar 16 09:35 runpilot2-wrapper.sh
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas       100 Mar 19 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 14:28:02] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 22:03 run_atlas
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas       105 Mar 19 22:03 job.xml
[2026-03-21 14:28:02] -rw-r--r--. 2 boincer umatlas 237000679 Mar 19 22:03 EVNT.49128136._000004.pool.root.1
[2026-03-21 14:28:02] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 22:03 start_atlas.sh
[2026-03-21 14:28:02] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 22:03 shared
[2026-03-21 14:28:02] -rw-r--r--. 2 boincer umatlas    596140 Mar 19 22:03 input.tar.gz
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas         0 Mar 19 22:03 boinc_lockfile
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas      2633 Mar 19 22:03 pandaJob.out
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas        57 Mar 19 22:03 setup.sh.local
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas      5111 Mar 19 22:04 queuedata.json
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas       440 Mar 19 22:05 workernode_map.json
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas   1010740 Mar 19 22:05 agis_schedconf.cvmfs.json
[2026-03-21 14:28:02] drwx------. 5 boincer umatlas      4096 Mar 19 22:06 pilot3
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas 234836211 Mar 21 14:24 HITS.49178139._000099.pool.root.1
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas       533 Mar 21 14:25 boinc_task_state.xml
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas      1048 Mar 21 14:27 memory_monitor_summary.json
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas   1511579 Mar 21 14:27 agis_ddmendpoints.agis.ALL.json
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas   2013757 Mar 21 14:27 log.49178139._000099.job.log.tgz.1
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas      6658 Mar 21 14:27 init_data.xml
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas        95 Mar 21 14:27 pilot_heartbeat.json
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas      6393 Mar 21 14:27 heartbeat.json
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas      8192 Mar 21 14:27 boinc_mmap_file
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas        30 Mar 21 14:27 wrapper_checkpoint.txt
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas       823 Mar 21 14:27 pilotlog.txt
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas  16659978 Mar 21 14:28 log.49178139._000099.job.log.1
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas       357 Mar 21 14:28 output.list
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas       620 Mar 21 14:28 runtime_log
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas  18688000 Mar 21 14:28 result.tar.gz
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas       659 Mar 21 14:28 YCKLDmAHNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDRxLDmgV2dXn.diag
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas      9333 Mar 21 14:28 runtime_log.err
[2026-03-21 14:28:02] -rw-r--r--. 1 boincer umatlas     21430 Mar 21 14:28 stderr.txt
[2026-03-21 14:28:02] HITS file was successfully produced:
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas 234836211 Mar 21 14:24 shared/HITS.pool.root.1
[2026-03-21 14:28:02]  *** Contents of shared directory: ***
[2026-03-21 14:28:02] total 479640
[2026-03-21 14:28:02] -rw-r--r--. 2 boincer umatlas 237000679 Mar 19 22:03 ATLAS.root_0
[2026-03-21 14:28:02] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 22:03 start_atlas.sh
[2026-03-21 14:28:02] -rw-r--r--. 2 boincer umatlas    596140 Mar 19 22:03 input.tar.gz
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas 234836211 Mar 21 14:24 HITS.pool.root.1
[2026-03-21 14:28:02] -rw-------. 1 boincer umatlas  18688000 Mar 21 14:28 result.tar.gz
14:28:03 (3216171): run_atlas exited; CPU time 135711.258521
14:28:03 (3216171): called boinc_finish(0)

</stderr_txt>
]]>

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