Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:06:11 (17413): wrapper (7.7.26015): starting
00:06:11 (17413): wrapper: running run_atlas (--nthreads 8)
[2026-03-20 00:06:11] Arguments: --nthreads 8
[2026-03-20 00:06:11] Threads: 8
[2026-03-20 00:06:11] Checking for CVMFS
[2026-03-20 00:06:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 00:06:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 00:06:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 00:06:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 00:06:15] 2.11.2.0 3545 135411 137592 157475 2 156 21045894 25165824 4493 130560 155 46702477 99.829 36284213 1172 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-20 00:06:15] CVMFS is ok
[2026-03-20 00:06:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 00:06:15] Checking for apptainer binary...
[2026-03-20 00:06:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 00:06:15] Running /usr/bin/apptainer --version
[2026-03-20 00:06:15] apptainer version 1.3.2-1.el7
[2026-03-20 00:06:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 00:06:23] cg-vwn466.simple-grid.lan
[2026-03-20 00:06:23] apptainer works
[2026-03-20 00:06:23] Set ATHENA_PROC_NUMBER=8
[2026-03-20 00:06:23] Set ATHENA_CORE_NUMBER=8
[2026-03-20 00:06:23] Starting ATLAS job with PandaID=7058918561
[2026-03-20 00:06:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 09:11:56]  *** The last 200 lines of the pilot log: ***
[2026-03-20 09:11:56] 2026-03-20 08:11:06,524 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7058918561/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,524 | INFO     | extracted standard info from prmon json
[2026-03-20 09:11:56] 2026-03-20 08:11:06,524 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 09:11:56] 2026-03-20 08:11:06,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 09:11:56] 2026-03-20 08:11:06,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 09:11:56] 2026-03-20 08:11:06,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 09:11:56] 2026-03-20 08:11:06,533 | INFO     | fitting pss+swap vs Time
[2026-03-20 09:11:56] 2026-03-20 08:11:06,534 | INFO     | sum of square deviations: 45126753087.5
[2026-03-20 09:11:56] 2026-03-20 08:11:06,544 | INFO     | sum of deviations: 139230708856.99997
[2026-03-20 09:11:56] 2026-03-20 08:11:06,544 | INFO     | mean x: 1773978192.5
[2026-03-20 09:11:56] 2026-03-20 08:11:06,544 | INFO     | mean y: 2508549.121673004
[2026-03-20 09:11:56] 2026-03-20 08:11:06,544 | INFO     | intersect: -5470791086.677979
[2026-03-20 09:11:56] 2026-03-20 08:11:06,545 | INFO     | chi2: 5.787343952944938
[2026-03-20 09:11:56] 2026-03-20 08:11:06,546 | INFO     | sum of square deviations: 43852059420.0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,552 | INFO     | sum of deviations: 136564156382.00003
[2026-03-20 09:11:56] 2026-03-20 08:11:06,552 | INFO     | mean x: 1773978040.0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,552 | INFO     | mean y: 2508230.5988483685
[2026-03-20 09:11:56] 2026-03-20 08:11:06,553 | INFO     | intersect: -5522017132.109736
[2026-03-20 09:11:56] 2026-03-20 08:11:06,553 | INFO     | chi2: 5.788352106844318
[2026-03-20 09:11:56] 2026-03-20 08:11:06,553 | INFO     | current chi2=5.788352106844318 (change=-0.017419975511685615 %)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,553 | INFO     | right removable region: 520
[2026-03-20 09:11:56] 2026-03-20 08:11:06,554 | INFO     | sum of square deviations: 43852059420.0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,561 | INFO     | sum of deviations: -48047155995.000015
[2026-03-20 09:11:56] 2026-03-20 08:11:06,561 | INFO     | mean x: 1773978345.0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,561 | INFO     | mean y: 2530945.5681381957
[2026-03-20 09:11:56] 2026-03-20 08:11:06,561 | INFO     | intersect: 1946216496.516134
[2026-03-20 09:11:56] 2026-03-20 08:11:06,562 | INFO     | chi2: 1.1897267716128512
[2026-03-20 09:11:56] 2026-03-20 08:11:06,562 | INFO     | current chi2=1.1897267716128512 (change=79.44261164903722 %)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,563 | INFO     | sum of square deviations: 42601598765.0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,572 | INFO     | sum of deviations: -114077257688.50002
[2026-03-20 09:11:56] 2026-03-20 08:11:06,573 | INFO     | mean x: 1773978497.5
[2026-03-20 09:11:56] 2026-03-20 08:11:06,573 | INFO     | mean y: 2538967.835271318
[2026-03-20 09:11:56] 2026-03-20 08:11:06,573 | INFO     | intersect: 4752844309.8832855
[2026-03-20 09:11:56] 2026-03-20 08:11:06,574 | INFO     | chi2: 0.3280346931697345
[2026-03-20 09:11:56] 2026-03-20 08:11:06,574 | INFO     | current chi2=0.3280346931697345 (change=72.42772870236124 %)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,574 | INFO     | sum of square deviations: 41375138560.0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,581 | INFO     | sum of deviations: -115125140546.00002
[2026-03-20 09:11:56] 2026-03-20 08:11:06,581 | INFO     | mean x: 1773978650.0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,581 | INFO     | mean y: 2539091.8454011744
[2026-03-20 09:11:56] 2026-03-20 08:11:06,581 | INFO     | intersect: 4938583985.343236
[2026-03-20 09:11:56] 2026-03-20 08:11:06,582 | INFO     | chi2: 0.31176665933468845
[2026-03-20 09:11:56] 2026-03-20 08:11:06,582 | INFO     | current chi2=0.31176665933468845 (change=4.959241864892779 %)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,582 | INFO     | left removable region: 30
[2026-03-20 09:11:56] 2026-03-20 08:11:06,583 | INFO     | sum of square deviations: 36480842142.5
[2026-03-20 09:11:56] 2026-03-20 08:11:06,589 | INFO     | sum of deviations: -71852545684.99998
[2026-03-20 09:11:56] 2026-03-20 08:11:06,589 | INFO     | mean x: 1773978924.5
[2026-03-20 09:11:56] 2026-03-20 08:11:06,589 | INFO     | mean y: 2533312.8775510206
[2026-03-20 09:11:56] 2026-03-20 08:11:06,589 | INFO     | intersect: 3496556318.6778316
[2026-03-20 09:11:56] 2026-03-20 08:11:06,590 | INFO     | chi2: 0.2579075791867538
[2026-03-20 09:11:56] 2026-03-20 08:11:06,590 | INFO     | current memory leak: -1.97 B/s (using 490 data points, chi2=0.26)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | could have reported an average CPU frequency of 2250 MHz (21 samples)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | ..............................
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | . Timing measurements:
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | . get job = 0 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | . initial setup = 106 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | . payload setup = 137 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | . stage-in = 0 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | . payload execution = 32196 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,591 | INFO     | . stage-out = 3 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,592 | INFO     | . log creation = 1 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,592 | INFO     | ..............................
[2026-03-20 09:11:56] 2026-03-20 08:11:06,684 | INFO     | 
[2026-03-20 09:11:56] 2026-03-20 08:11:06,684 | INFO     | job summary report
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | --------------------------------------------------
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | PanDA job id: 7058918561
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | task id: 49181154
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | errors: (none)
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | pilot state: finished 
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | transexitcode: 0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | exeerrorcode: 0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | exeerrordiag: 
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | exitcode: 0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | exitmsg: OK
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | cpuconsumptiontime: 127196 s
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | nevents: 400
[2026-03-20 09:11:56] 2026-03-20 08:11:06,685 | INFO     | neventsw: 0
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | pid: 25985
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | pgrp: 25985
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | corecount: 8
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | event service: False
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | sizes: {0: 2279141, 1: 2253619, 2: 2280230, 12: 2280230, 32337: 2318947, 32341: 2328129, 32343: 2328267}
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | --------------------------------------------------
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | 
[2026-03-20 09:11:56] 2026-03-20 08:11:06,686 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-20 09:11:56] 2026-03-20 08:11:06,832 | INFO     | time since job start (32355s) is within the limit (345600.0s)
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 09:11:56] 2026-03-20 08:11:07,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,272 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 09:11:56] 2026-03-20 08:11:07,272 | INFO     | job 7058918561 has completed (purged errors)
[2026-03-20 09:11:56] 2026-03-20 08:11:07,272 | INFO     | overall cleanup function is called
[2026-03-20 09:11:56] 2026-03-20 08:11:08,286 | INFO     | --- collectZombieJob: --- 10, [25985]
[2026-03-20 09:11:56] 2026-03-20 08:11:08,286 | INFO     | zombie collector waiting for pid 25985
[2026-03-20 09:11:56] 2026-03-20 08:11:08,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 09:11:56] 2026-03-20 08:11:08,287 | INFO     | collected zombie processes
[2026-03-20 09:11:56] 2026-03-20 08:11:08,287 | INFO     | will attempt to kill all subprocesses of pid=25985
[2026-03-20 09:11:56] 2026-03-20 08:11:08,380 | INFO     | process IDs to be killed: [25985] (in reverse order)
[2026-03-20 09:11:56] 2026-03-20 08:11:09,063 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 09:11:56] 2026-03-20 08:11:09,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 09:11:56] 2026-03-20 08:11:09,066 | INFO     | did not find any defunct processes belonging to 25985
[2026-03-20 09:11:56] 2026-03-20 08:11:09,069 | INFO     | did not find any defunct processes belonging to 25985
[2026-03-20 09:11:56] 2026-03-20 08:11:09,070 | INFO     | ready for new job
[2026-03-20 09:11:56] 2026-03-20 08:11:09,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 09:11:56] 2026-03-20 08:11:09,073 | INFO     | **************************************
[2026-03-20 09:11:56] 2026-03-20 08:11:09,073 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 09:11:56] 2026-03-20 08:11:09,073 | INFO     | **************************************
[2026-03-20 09:11:56] 2026-03-20 08:11:09,073 | INFO     | 
[2026-03-20 09:11:56] 2026-03-20 08:11:09,074 | INFO     | pilot is running in a VM
[2026-03-20 09:11:56] 2026-03-20 08:11:09,074 | INFO     | architecture information:
[2026-03-20 09:11:56] 2026-03-20 08:11:09,074 | INFO     | executing command: cat /etc/os-release
[2026-03-20 09:11:56] 2026-03-20 08:11:09,190 | INFO     | cat /etc/os-release:
[2026-03-20 09:11:56] NAME="CentOS Linux"
[2026-03-20 09:11:56] VERSION="7 (Core)"
[2026-03-20 09:11:56] ID="centos"
[2026-03-20 09:11:56] ID_LIKE="rhel fedora"
[2026-03-20 09:11:56] VERSION_ID="7"
[2026-03-20 09:11:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 09:11:56] ANSI_COLOR="0;31"
[2026-03-20 09:11:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 09:11:56] HOME_URL="https://www.centos.org/"
[2026-03-20 09:11:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 09:11:56] 
[2026-03-20 09:11:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 09:11:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 09:11:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 09:11:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 09:11:56] 
[2026-03-20 09:11:56] 2026-03-20 08:11:09,190 | INFO     | **************************************
[2026-03-20 09:11:56] 2026-03-20 08:11:09,694 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-20 09:11:56] 2026-03-20 08:11:09,844 | INFO     | sufficient remaining disk space (495119761408 B)
[2026-03-20 09:11:56] 2026-03-20 08:11:09,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 09:11:56] 2026-03-20 08:11:09,844 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 09:11:56] 2026-03-20 08:11:09,845 | INFO     | update_server=False
[2026-03-20 09:11:56] 2026-03-20 08:11:09,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 09:11:56] 2026-03-20 08:11:09,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 09:11:56] 2026-03-20 08:11:10,032 | INFO     | all data control threads have been joined
[2026-03-20 09:11:56] 2026-03-20 08:11:10,056 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-20 09:11:56] 2026-03-20 08:11:10,056 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-20 09:11:56] 2026-03-20 08:11:10,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 09:11:56] 2026-03-20 08:11:10,057 | INFO     | will abort loop
[2026-03-20 09:11:56] 2026-03-20 08:11:10,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 09:11:56] 2026-03-20 08:11:10,765 | INFO     | all payload control threads have been joined
[2026-03-20 09:11:56] 2026-03-20 08:11:10,850 | INFO     | [job] retrieve thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,038 | INFO     | [data] control thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,062 | INFO     | [job] job monitor thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,277 | INFO     | all job control threads have been joined
[2026-03-20 09:11:56] 2026-03-20 08:11:11,287 | INFO     | [payload] validate_post thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,300 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,438 | INFO     | [payload] failed_post thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,615 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,697 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 09:11:56] 2026-03-20 08:11:11,771 | INFO     | [payload] control thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,882 | INFO     | [job] validate thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,904 | INFO     | [data] copytool_in thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:11,910 | INFO     | [data] copytool_out thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:12,021 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:12,283 | INFO     | [job] control thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:12,703 | INFO     | [job] queue monitor thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:14,509 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 09:11:56] 2026-03-20 08:11:39,975 | INFO     | PID=21454 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-20 09:11:56] 2026-03-20 08:11:39,976 | INFO     | .. there are 9 such processes running
[2026-03-20 09:11:56] 2026-03-20 08:11:39,976 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 09:11:56] 2026-03-20 08:11:39,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 09:11:56] 2026-03-20 08:11:39,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 09:11:56] 2026-03-20 08:11:46,717 | INFO     | [monitor] cgroup control has ended
[2026-03-20 09:11:56] 2026-03-20 08:11:47,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139620919969600)>', '<ExcThread(monitor, started 139620243199744)>']
[2026-03-20 09:11:56] 2026-03-20 08:11:48,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 09:11:56] 2026-03-20 08:11:48,022 | INFO     | [monitor] control thread has ended
[2026-03-20 09:11:56] 2026-03-20 08:11:52,195 | INFO     | all workflow threads have been joined
[2026-03-20 09:11:56] 2026-03-20 08:11:52,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 09:11:56] 2026-03-20 08:11:52,196 | INFO     | traces error code: 0
[2026-03-20 09:11:56] 2026-03-20 08:11:52,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 09:11:56] 2026-03-20 08:11:52,434 [wrapper] ==== pilot stdout END ====
[2026-03-20 09:11:56] 2026-03-20 08:11:52,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 09:11:56] 2026-03-20 08:11:52,527 [wrapper] pilotpid: 21454
[2026-03-20 09:11:56] 2026-03-20 08:11:52,564 [wrapper] Pilot exit status: 0
[2026-03-20 09:11:56] 2026-03-20 08:11:52,990 [wrapper] pandaids: 7058918561
[2026-03-20 09:11:56] 2026-03-20 08:11:53,967 [wrapper] cleanup supervisor_pilot 21510 21455
[2026-03-20 09:11:56] 2026-03-20 08:11:54,079 [wrapper] Test setup, not cleaning
[2026-03-20 09:11:56] 2026-03-20 08:11:54,204 [wrapper] apfmon messages muted
[2026-03-20 09:11:56] 2026-03-20 08:11:54,316 [wrapper] ==== wrapper stdout END ====
[2026-03-20 09:11:56] 2026-03-20 08:11:54,384 [wrapper] ==== wrapper stderr END ====
[2026-03-20 09:11:56]  *** Error codes and diagnostics ***
[2026-03-20 09:11:56]     "exeErrorCode": 0,
[2026-03-20 09:11:56]     "exeErrorDiag": "",
[2026-03-20 09:11:56]     "pilotErrorCode": 0,
[2026-03-20 09:11:56]     "pilotErrorDiag": "",
[2026-03-20 09:11:56]  *** Listing of results directory ***
[2026-03-20 09:11:56] total 490804
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-20 09:11:56] -rwx------. 1 boinc boinc     36322 Mar 18 14:21 runpilot2-wrapper.sh
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc      5111 Mar 18 14:22 queuedata.json
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc       100 Mar 20 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 09:11:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 20 00:06 run_atlas
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc       105 Mar 20 00:06 job.xml
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc      6392 Mar 20 00:06 init_data.xml
[2026-03-20 09:11:56] -rw-r--r--. 2 boinc boinc 245978256 Mar 20 00:06 EVNT.49134557._000027.pool.root.1
[2026-03-20 09:11:56] -rw-r--r--. 2 boinc boinc     15845 Mar 20 00:06 start_atlas.sh
[2026-03-20 09:11:56] drwxrwx--x. 2 boinc boinc        68 Mar 20 00:06 shared
[2026-03-20 09:11:56] -rw-r--r--. 2 boinc boinc    597541 Mar 20 00:06 input.tar.gz
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc         0 Mar 20 00:06 boinc_lockfile
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc      2596 Mar 20 00:06 pandaJob.out
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc       413 Mar 20 00:11 workernode_map.json
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc   1010740 Mar 20 00:11 agis_schedconf.cvmfs.json
[2026-03-20 09:11:56] drwx------. 5 boinc boinc      4096 Mar 20 00:11 pilot3
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc 242287138 Mar 20 09:09 HITS.49181154._000600.pool.root.1
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc       531 Mar 20 09:10 boinc_task_state.xml
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc      1014 Mar 20 09:10 memory_monitor_summary.json
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc   1511579 Mar 20 09:11 agis_ddmendpoints.agis.ALL.json
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc    716872 Mar 20 09:11 log.49181154._000600.job.log.tgz.1
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc      6324 Mar 20 09:11 heartbeat.json
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc        29 Mar 20 09:11 wrapper_checkpoint.txt
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc      8192 Mar 20 09:11 boinc_mmap_file
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc        95 Mar 20 09:11 pilot_heartbeat.json
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc      5066 Mar 20 09:11 pilotlog.txt
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc   4475774 Mar 20 09:11 log.49181154._000600.job.log.1
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc       357 Mar 20 09:11 output.list
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc       620 Mar 20 09:11 runtime_log
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc   5212160 Mar 20 09:11 result.tar.gz
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc      8816 Mar 20 09:11 runtime_log.err
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc       658 Mar 20 09:11 qLXMDmD15M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqHzLDmEO3cSo.diag
[2026-03-20 09:11:56] -rw-r--r--. 1 boinc boinc     20751 Mar 20 09:11 stderr.txt
[2026-03-20 09:11:56] HITS file was successfully produced:
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc 242287138 Mar 20 09:09 shared/HITS.pool.root.1
[2026-03-20 09:11:56]  *** Contents of shared directory: ***
[2026-03-20 09:11:56] total 482520
[2026-03-20 09:11:56] -rw-r--r--. 2 boinc boinc 245978256 Mar 20 00:06 ATLAS.root_0
[2026-03-20 09:11:56] -rw-r--r--. 2 boinc boinc     15845 Mar 20 00:06 start_atlas.sh
[2026-03-20 09:11:56] -rw-r--r--. 2 boinc boinc    597541 Mar 20 00:06 input.tar.gz
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc 242287138 Mar 20 09:09 HITS.pool.root.1
[2026-03-20 09:11:56] -rw-------. 1 boinc boinc   5212160 Mar 20 09:11 result.tar.gz
09:11:57 (17413): run_atlas exited; CPU time 127614.736060
09:11:57 (17413): called boinc_finish(0)

</stderr_txt>
]]>

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