Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:43:59 (11914): wrapper (7.7.26015): starting
07:43:59 (11914): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 07:43:59] Arguments: --nthreads 8
[2026-03-19 07:43:59] Threads: 8
[2026-03-19 07:43:59] Checking for CVMFS
[2026-03-19 07:43:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 07:44:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 07:44:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 07:44:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 07:44:00] 2.11.2.0 1632 128821 151428 157452 1 11 10834916 18432000 1833 130560 0 66646847 99.982 4546914 23210 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-19 07:44:00] CVMFS is ok
[2026-03-19 07:44:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 07:44:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 07:44:00] Further information can be found at the LHC@home message board.
[2026-03-19 07:44:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 07:44:00] Checking for apptainer binary...
[2026-03-19 07:44:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 07:44:00] Running /usr/bin/apptainer --version
[2026-03-19 07:44:00] apptainer version 1.3.2-1.el7
[2026-03-19 07:44:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 07:44:01] c-206-1.aglt2.org
[2026-03-19 07:44:01] apptainer works
[2026-03-19 07:44:01] Set ATHENA_PROC_NUMBER=8
[2026-03-19 07:44:01] Set ATHENA_CORE_NUMBER=8
[2026-03-19 07:44:01] Starting ATLAS job with PandaID=7056933349
[2026-03-19 07:44:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 12:00:46]  *** The last 200 lines of the pilot log: ***
[2026-03-19 12:00:46] 2026-03-19 15:59:53,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,828 | INFO     | log transfer has been attempted: DONE
[2026-03-19 12:00:46] 2026-03-19 15:59:53,829 | INFO     | job 7056933349 has finished - writing final server update
[2026-03-19 12:00:46] 2026-03-19 15:59:53,829 | INFO     | total number of processed events: 400 (read)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,833 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7056933349/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,833 | INFO     | extracted standard info from prmon json
[2026-03-19 12:00:46] 2026-03-19 15:59:53,833 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 12:00:46] 2026-03-19 15:59:53,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 12:00:46] 2026-03-19 15:59:53,834 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 12:00:46] 2026-03-19 15:59:53,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 12:00:46] 2026-03-19 15:59:53,838 | INFO     | fitting pss+swap vs Time
[2026-03-19 12:00:46] 2026-03-19 15:59:53,838 | INFO     | sum of square deviations: 4962187923.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,840 | INFO     | sum of deviations: -42417807869.50001
[2026-03-19 12:00:46] 2026-03-19 15:59:53,840 | INFO     | mean x: 1773928326.5
[2026-03-19 12:00:46] 2026-03-19 15:59:53,840 | INFO     | mean y: 2557513.115079365
[2026-03-19 12:00:46] 2026-03-19 15:59:53,840 | INFO     | intersect: 15166463454.478333
[2026-03-19 12:00:46] 2026-03-19 15:59:53,840 | INFO     | chi2: 2.421112836864082
[2026-03-19 12:00:46] 2026-03-19 15:59:53,841 | INFO     | sum of square deviations: 4672638308.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,842 | INFO     | sum of deviations: -24353244171.000008
[2026-03-19 12:00:46] 2026-03-19 15:59:53,842 | INFO     | mean x: 1773928174.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,842 | INFO     | mean y: 2566884.2874493925
[2026-03-19 12:00:46] 2026-03-19 15:59:53,843 | INFO     | intersect: 9248072980.762783
[2026-03-19 12:00:46] 2026-03-19 15:59:53,843 | INFO     | chi2: 1.6532042722650218
[2026-03-19 12:00:46] 2026-03-19 15:59:53,843 | INFO     | current chi2=1.6532042722650218 (change=31.7171737271727 %)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,844 | INFO     | sum of square deviations: 4394577280.5
[2026-03-19 12:00:46] 2026-03-19 15:59:53,845 | INFO     | sum of deviations: -23474896325.999985
[2026-03-19 12:00:46] 2026-03-19 15:59:53,845 | INFO     | mean x: 1773928021.5
[2026-03-19 12:00:46] 2026-03-19 15:59:53,845 | INFO     | mean y: 2567366.082644628
[2026-03-19 12:00:46] 2026-03-19 15:59:53,845 | INFO     | intersect: 9478513227.651564
[2026-03-19 12:00:46] 2026-03-19 15:59:53,846 | INFO     | chi2: 1.6522764514092163
[2026-03-19 12:00:46] 2026-03-19 15:59:53,846 | INFO     | current chi2=1.6522764514092163 (change=0.05612257791556887 %)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,846 | INFO     | right removable region: 241
[2026-03-19 12:00:46] 2026-03-19 15:59:53,846 | INFO     | sum of square deviations: 4672638308.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,848 | INFO     | sum of deviations: -79777424430.00002
[2026-03-19 12:00:46] 2026-03-19 15:59:53,848 | INFO     | mean x: 1773928479.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,848 | INFO     | mean y: 2577007.7611336033
[2026-03-19 12:00:46] 2026-03-19 15:59:53,848 | INFO     | intersect: 30289416229.909496
[2026-03-19 12:00:46] 2026-03-19 15:59:53,849 | INFO     | chi2: 1.044686544381213
[2026-03-19 12:00:46] 2026-03-19 15:59:53,849 | INFO     | current chi2=1.044686544381213 (change=56.85097660568638 %)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,849 | INFO     | sum of square deviations: 4394577280.5
[2026-03-19 12:00:46] 2026-03-19 15:59:53,850 | INFO     | sum of deviations: -85386425487.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,851 | INFO     | mean x: 1773928631.5
[2026-03-19 12:00:46] 2026-03-19 15:59:53,851 | INFO     | mean y: 2580084.272727273
[2026-03-19 12:00:46] 2026-03-19 15:59:53,851 | INFO     | intersect: 34469928191.89253
[2026-03-19 12:00:46] 2026-03-19 15:59:53,851 | INFO     | chi2: 0.9952188801141116
[2026-03-19 12:00:46] 2026-03-19 15:59:53,851 | INFO     | current chi2=0.9952188801141116 (change=4.735168126091063 %)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,851 | INFO     | left removable region: 20
[2026-03-19 12:00:46] 2026-03-19 15:59:53,852 | INFO     | sum of square deviations: 3346927870.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,853 | INFO     | sum of deviations: -55544965078.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,853 | INFO     | mean x: 1773928601.0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,853 | INFO     | mean y: 2585346.515837104
[2026-03-19 12:00:46] 2026-03-19 15:59:53,854 | INFO     | intersect: 29442359975.841927
[2026-03-19 12:00:46] 2026-03-19 15:59:53,854 | INFO     | chi2: 0.20098757670142625
[2026-03-19 12:00:46] 2026-03-19 15:59:53,854 | INFO     | current memory leak: -16.60 B/s (using 221 data points, chi2=0.20)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,854 | INFO     | could have reported an average CPU frequency of 2450 MHz (12 samples)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | ..............................
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . Timing measurements:
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . get job = 0 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . initial setup = 6 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . payload setup = 7 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . stage-in = 0 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . payload execution = 15319 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . stage-out = 2 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | . log creation = 0 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,855 | INFO     | ..............................
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | 
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | job summary report
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | --------------------------------------------------
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | PanDA job id: 7056933349
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | task id: 49178177
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | errors: (none)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | pilot state: finished 
[2026-03-19 12:00:46] 2026-03-19 15:59:53,933 | INFO     | transexitcode: 0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | exeerrorcode: 0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | exeerrordiag: 
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | exitcode: 0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | exitmsg: OK
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | cpuconsumptiontime: 116706 s
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | nevents: 400
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | neventsw: 0
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | pid: 20345
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | pgrp: 20345
[2026-03-19 12:00:46] 2026-03-19 15:59:53,934 | INFO     | corecount: 8
[2026-03-19 12:00:46] 2026-03-19 15:59:53,935 | INFO     | event service: False
[2026-03-19 12:00:46] 2026-03-19 15:59:53,935 | INFO     | sizes: {0: 2279943, 1: 2280404, 15331: 2311596, 15334: 2320594, 15335: 2320844}
[2026-03-19 12:00:46] 2026-03-19 15:59:53,935 | INFO     | --------------------------------------------------
[2026-03-19 12:00:46] 2026-03-19 15:59:53,935 | INFO     | 
[2026-03-19 12:00:46] 2026-03-19 15:59:53,935 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-19 12:00:46] 2026-03-19 15:59:53,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,963 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,963 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 12:00:46] 2026-03-19 15:59:53,963 | INFO     | job 7056933349 has completed (purged errors)
[2026-03-19 12:00:46] 2026-03-19 15:59:53,963 | INFO     | overall cleanup function is called
[2026-03-19 12:00:46] 2026-03-19 15:59:54,971 | INFO     | --- collectZombieJob: --- 10, [20345]
[2026-03-19 12:00:46] 2026-03-19 15:59:54,971 | INFO     | zombie collector waiting for pid 20345
[2026-03-19 12:00:46] 2026-03-19 15:59:54,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 12:00:46] 2026-03-19 15:59:54,988 | INFO     | collected zombie processes
[2026-03-19 12:00:46] 2026-03-19 15:59:54,988 | INFO     | will attempt to kill all subprocesses of pid=20345
[2026-03-19 12:00:46] 2026-03-19 15:59:55,081 | INFO     | process IDs to be killed: [20345] (in reverse order)
[2026-03-19 12:00:46] 2026-03-19 15:59:55,136 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 12:00:46] 2026-03-19 15:59:55,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 12:00:46] 2026-03-19 15:59:55,140 | INFO     | did not find any defunct processes belonging to 20345
[2026-03-19 12:00:46] 2026-03-19 15:59:55,143 | INFO     | did not find any defunct processes belonging to 20345
[2026-03-19 12:00:46] 2026-03-19 15:59:55,144 | INFO     | ready for new job
[2026-03-19 12:00:46] 2026-03-19 15:59:55,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 12:00:46] 2026-03-19 15:59:55,145 | INFO     | **************************************
[2026-03-19 12:00:46] 2026-03-19 15:59:55,145 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 12:00:46] 2026-03-19 15:59:55,146 | INFO     | **************************************
[2026-03-19 12:00:46] 2026-03-19 15:59:55,146 | INFO     | 
[2026-03-19 12:00:46] 2026-03-19 15:59:55,147 | INFO     | architecture information:
[2026-03-19 12:00:46] 2026-03-19 15:59:55,147 | INFO     | executing command: cat /etc/os-release
[2026-03-19 12:00:46] 2026-03-19 15:59:55,163 | INFO     | cat /etc/os-release:
[2026-03-19 12:00:46] NAME="CentOS Linux"
[2026-03-19 12:00:46] VERSION="7 (Core)"
[2026-03-19 12:00:46] ID="centos"
[2026-03-19 12:00:46] ID_LIKE="rhel fedora"
[2026-03-19 12:00:46] VERSION_ID="7"
[2026-03-19 12:00:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 12:00:46] ANSI_COLOR="0;31"
[2026-03-19 12:00:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 12:00:46] HOME_URL="https://www.centos.org/"
[2026-03-19 12:00:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 12:00:46] 
[2026-03-19 12:00:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 12:00:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 12:00:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 12:00:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 12:00:46] 
[2026-03-19 12:00:46] 2026-03-19 15:59:55,163 | INFO     | **************************************
[2026-03-19 12:00:46] 2026-03-19 15:59:55,666 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-19 12:00:46] 2026-03-19 15:59:55,683 | INFO     | sufficient remaining disk space (29449256960 B)
[2026-03-19 12:00:46] 2026-03-19 15:59:55,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 12:00:46] 2026-03-19 15:59:55,684 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 12:00:46] 2026-03-19 15:59:55,684 | INFO     | update_server=False
[2026-03-19 12:00:46] 2026-03-19 15:59:55,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 12:00:46] 2026-03-19 15:59:55,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 12:00:46] 2026-03-19 15:59:55,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 12:00:46] 2026-03-19 15:59:55,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 12:00:46] 2026-03-19 15:59:55,922 | INFO     | aborting loop
[2026-03-19 12:00:46] 2026-03-19 15:59:56,312 | INFO     | all payload control threads have been joined
[2026-03-19 12:00:46] 2026-03-19 15:59:56,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 12:00:46] 2026-03-19 15:59:56,541 | INFO     | all job control threads have been joined
[2026-03-19 12:00:46] 2026-03-19 15:59:56,566 | INFO     | all data control threads have been joined
[2026-03-19 12:00:46] 2026-03-19 15:59:56,690 | INFO     | [job] retrieve thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:56,690 | INFO     | [job] queue monitor thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:56,753 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:56,873 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:56,888 | INFO     | [data] copytool_in thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:56,920 | INFO     | [payload] failed_post thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:56,927 | INFO     | [job] job monitor thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:57,314 | INFO     | [payload] control thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:57,546 | INFO     | [job] control thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:57,571 | INFO     | [data] control thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:57,595 | INFO     | [payload] validate_post thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:57,857 | INFO     | [job] validate thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:57,864 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:58,352 | INFO     | [data] copytool_out thread has finished
[2026-03-19 12:00:46] 2026-03-19 15:59:59,691 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 12:00:46] 2026-03-19 16:00:05,795 | INFO     | job.realtimelogging is not enabled
[2026-03-19 12:00:46] 2026-03-19 16:00:06,801 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 12:00:46] 2026-03-19 16:00:25,338 | INFO     | PID=15922 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 12:00:46] 2026-03-19 16:00:25,338 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 12:00:46] 2026-03-19 16:00:25,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 12:00:46] 2026-03-19 16:00:25,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 12:00:46] 2026-03-19 16:00:39,050 | INFO     | [monitor] cgroup control has ended
[2026-03-19 12:00:46] 2026-03-19 16:00:40,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398639019840)>', '<ExcThread(monitor, started 140397967824640)>']
[2026-03-19 12:00:46] 2026-03-19 16:00:41,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 12:00:46] 2026-03-19 16:00:41,415 | INFO     | [monitor] control thread has ended
[2026-03-19 12:00:46] 2026-03-19 16:00:45,905 | INFO     | all workflow threads have been joined
[2026-03-19 12:00:46] 2026-03-19 16:00:45,905 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 12:00:46] 2026-03-19 16:00:45,905 | INFO     | traces error code: 0
[2026-03-19 12:00:46] 2026-03-19 16:00:45,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 12:00:46] 2026-03-19 16:00:45,995 [wrapper] ==== pilot stdout END ====
[2026-03-19 12:00:46] 2026-03-19 16:00:45,999 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 12:00:46] 2026-03-19 16:00:46,003 [wrapper] pilotpid: 15922
[2026-03-19 12:00:46] 2026-03-19 16:00:46,006 [wrapper] Pilot exit status: 0
[2026-03-19 12:00:46] 2026-03-19 16:00:46,021 [wrapper] pandaids: 7056933349
[2026-03-19 12:00:46] 2026-03-19 16:00:46,070 [wrapper] cleanup supervisor_pilot 17643 15923
[2026-03-19 12:00:46] 2026-03-19 16:00:46,075 [wrapper] Test setup, not cleaning
[2026-03-19 12:00:46] 2026-03-19 16:00:46,079 [wrapper] apfmon messages muted
[2026-03-19 12:00:46] 2026-03-19 16:00:46,082 [wrapper] ==== wrapper stdout END ====
[2026-03-19 12:00:46] 2026-03-19 16:00:46,086 [wrapper] ==== wrapper stderr END ====
[2026-03-19 12:00:46]  *** Error codes and diagnostics ***
[2026-03-19 12:00:46]     "exeErrorCode": 0,
[2026-03-19 12:00:46]     "exeErrorDiag": "",
[2026-03-19 12:00:46]     "pilotErrorCode": 0,
[2026-03-19 12:00:46]     "pilotErrorDiag": "",
[2026-03-19 12:00:46]  *** Listing of results directory ***
[2026-03-19 12:00:46] total 433724
[2026-03-19 12:00:46] -rwx------ 1 boincer umatlas     36322 Mar 16 10:08 runpilot2-wrapper.sh
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas    585013 Mar 16 10:08 pilot3.tar.gz
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas      5111 Mar 16 10:09 queuedata.json
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas       100 Mar 19 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 12:00:46] -rwxr-xr-x 1 boincer umatlas      7986 Mar 19 07:43 run_atlas
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas       105 Mar 19 07:43 job.xml
[2026-03-19 12:00:46] -rw-r--r-- 2 boincer umatlas 232035182 Mar 19 07:43 EVNT.49128225._000001.pool.root.1
[2026-03-19 12:00:46] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 07:43 start_atlas.sh
[2026-03-19 12:00:46] drwxrwx--x 2 boincer umatlas      4096 Mar 19 07:43 shared
[2026-03-19 12:00:46] -rw-r--r-- 2 boincer umatlas    597548 Mar 19 07:43 input.tar.gz
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas         0 Mar 19 07:43 boinc_lockfile
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas      2688 Mar 19 07:44 pandaJob.out
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas        57 Mar 19 07:44 setup.sh.local
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas   1010732 Mar 19 07:44 agis_schedconf.cvmfs.json
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas       444 Mar 19 07:44 workernode_map.json
[2026-03-19 12:00:46] drwx------ 5 boincer umatlas      4096 Mar 19 07:44 pilot3
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas      5952 Mar 19 11:55 init_data.xml
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas 202943120 Mar 19 11:59 HITS.49178177._000002.pool.root.1
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas       531 Mar 19 11:59 boinc_task_state.xml
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas      1057 Mar 19 11:59 memory_monitor_summary.json
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas   1511579 Mar 19 11:59 agis_ddmendpoints.agis.ALL.json
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas    468746 Mar 19 11:59 log.49178177._000002.job.log.tgz.1
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas      6413 Mar 19 11:59 heartbeat.json
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas        95 Mar 19 12:00 pilot_heartbeat.json
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas      8192 Mar 19 12:00 boinc_mmap_file
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas        29 Mar 19 12:00 wrapper_checkpoint.txt
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas      4814 Mar 19 12:00 pilotlog.txt
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas   2140087 Mar 19 12:00 log.49178177._000002.job.log.1
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas       357 Mar 19 12:00 output.list
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas       620 Mar 19 12:00 runtime_log
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas   2621440 Mar 19 12:00 result.tar.gz
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas      9337 Mar 19 12:00 runtime_log.err
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas       664 Mar 19 12:00 rBMNDm7mNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbYxLDmEuEEKn.diag
[2026-03-19 12:00:46] -rw-r--r-- 1 boincer umatlas     21007 Mar 19 12:00 stderr.txt
[2026-03-19 12:00:46] HITS file was successfully produced:
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas 202943120 Mar 19 11:59 shared/HITS.pool.root.1
[2026-03-19 12:00:46]  *** Contents of shared directory: ***
[2026-03-19 12:00:46] total 427952
[2026-03-19 12:00:46] -rw-r--r-- 2 boincer umatlas 232035182 Mar 19 07:43 ATLAS.root_0
[2026-03-19 12:00:46] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 07:43 start_atlas.sh
[2026-03-19 12:00:46] -rw-r--r-- 2 boincer umatlas    597548 Mar 19 07:43 input.tar.gz
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas 202943120 Mar 19 11:59 HITS.pool.root.1
[2026-03-19 12:00:46] -rw------- 1 boincer umatlas   2621440 Mar 19 12:00 result.tar.gz
12:00:47 (11914): run_atlas exited; CPU time 116269.514411
12:00:47 (11914): called boinc_finish(0)

</stderr_txt>
]]>

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