Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:32:07 (2324073): wrapper (7.7.26015): starting
07:32:07 (2324073): wrapper: running run_atlas (--nthreads 10)
[2026-03-19 07:32:07] Arguments: --nthreads 10
[2026-03-19 07:32:07] Threads: 10
[2026-03-19 07:32:07] Checking for CVMFS
[2026-03-19 07:32:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 07:32:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 07:32:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 07:32:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 07:32:10] 2.13.3.0 5210 153375 482416 157452 3 108 27158268 32935937 24499 16776704 0 371617608 99.449 548336615 31244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 07:32:10] CVMFS is ok
[2026-03-19 07:32:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 07:32:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 07:32:10] Further information can be found at the LHC@home message board.
[2026-03-19 07:32:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 07:32:10] Checking for apptainer binary...
[2026-03-19 07:32:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 07:32:10] Running /usr/bin/apptainer --version
[2026-03-19 07:32:11] apptainer version 1.4.5-2.el9
[2026-03-19 07:32:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 07:32:12] c6-1-26-2.aglt2.org
[2026-03-19 07:32:12] apptainer works
[2026-03-19 07:32:12] Set ATHENA_PROC_NUMBER=10
[2026-03-19 07:32:12] Set ATHENA_CORE_NUMBER=10
[2026-03-19 07:32:12] Starting ATLAS job with PandaID=7045292546
[2026-03-19 07:32:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 13:11:35]  *** The last 200 lines of the pilot log: ***
[2026-03-19 13:11:35] 2026-03-19 17:10:25,874 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-19 13:11:35] 2026-03-19 17:10:25,874 | INFO     | this job has now completed (state=finished)
[2026-03-19 13:11:35] 2026-03-19 17:10:25,874 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 13:11:35] 2026-03-19 17:10:25,874 | INFO     | log transfer has been attempted: DONE
[2026-03-19 13:11:35] 2026-03-19 17:10:25,874 | INFO     | job 7045292546 has finished - writing final server update
[2026-03-19 13:11:35] 2026-03-19 17:10:25,875 | INFO     | total number of processed events: 400 (read)
[2026-03-19 13:11:35] 2026-03-19 17:10:25,983 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045292546/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 13:11:35] 2026-03-19 17:10:25,984 | INFO     | extracted standard info from prmon json
[2026-03-19 13:11:35] 2026-03-19 17:10:25,984 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 13:11:35] 2026-03-19 17:10:25,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 13:11:35] 2026-03-19 17:10:25,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 13:11:35] 2026-03-19 17:10:25,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 13:11:35] 2026-03-19 17:10:26,024 | INFO     | fitting pss+swap vs Time
[2026-03-19 13:11:35] 2026-03-19 17:10:26,024 | INFO     | sum of square deviations: 10941567334.265253
[2026-03-19 13:11:35] 2026-03-19 17:10:26,055 | INFO     | sum of deviations: 389782994.03964615
[2026-03-19 13:11:35] 2026-03-19 17:10:26,055 | INFO     | mean x: 1773930191.8567073
[2026-03-19 13:11:35] 2026-03-19 17:10:26,055 | INFO     | mean y: 2183683.2774390243
[2026-03-19 13:11:35] 2026-03-19 17:10:26,055 | INFO     | intersect: -61010903.04419817
[2026-03-19 13:11:35] 2026-03-19 17:10:26,056 | INFO     | chi2: 6.3277583209194495
[2026-03-19 13:11:35] 2026-03-19 17:10:26,138 | INFO     | sum of square deviations: 10448773770.340584
[2026-03-19 13:11:35] 2026-03-19 17:10:26,140 | INFO     | sum of deviations: 41522376983.99694
[2026-03-19 13:11:35] 2026-03-19 17:10:26,140 | INFO     | mean x: 1773930039.3591332
[2026-03-19 13:11:35] 2026-03-19 17:10:26,140 | INFO     | mean y: 2196307.560371517
[2026-03-19 13:11:35] 2026-03-19 17:10:26,141 | INFO     | intersect: -7047223409.668854
[2026-03-19 13:11:35] 2026-03-19 17:10:26,141 | INFO     | chi2: 4.836632218429492
[2026-03-19 13:11:35] 2026-03-19 17:10:26,141 | INFO     | current chi2=4.836632218429492 (change=23.56483966146941 %)
[2026-03-19 13:11:35] 2026-03-19 17:10:26,141 | INFO     | right removable region: 322
[2026-03-19 13:11:35] 2026-03-19 17:10:26,141 | INFO     | sum of square deviations: 10448762302.055712
[2026-03-19 13:11:35] 2026-03-19 17:10:26,169 | INFO     | sum of deviations: -76801135349.08043
[2026-03-19 13:11:35] 2026-03-19 17:10:26,169 | INFO     | mean x: 1773930344.3560371
[2026-03-19 13:11:35] 2026-03-19 17:10:26,169 | INFO     | mean y: 2207520.374613003
[2026-03-19 13:11:35] 2026-03-19 17:10:26,169 | INFO     | intersect: 13041059447.35593
[2026-03-19 13:11:35] 2026-03-19 17:10:26,170 | INFO     | chi2: 3.460869899730467
[2026-03-19 13:11:35] 2026-03-19 17:10:26,170 | INFO     | current chi2=3.460869899730467 (change=45.306541049633694 %)
[2026-03-19 13:11:35] 2026-03-19 17:10:26,170 | INFO     | sum of square deviations: 9971020456.75479
[2026-03-19 13:11:35] 2026-03-19 17:10:26,172 | INFO     | sum of deviations: -110794872145.9245
[2026-03-19 13:11:35] 2026-03-19 17:10:26,196 | INFO     | mean x: 1773930496.8490567
[2026-03-19 13:11:35] 2026-03-19 17:10:26,196 | INFO     | mean y: 2218355.251572327
[2026-03-19 13:11:35] 2026-03-19 17:10:26,196 | INFO     | intersect: 19713581243.991955
[2026-03-19 13:11:35] 2026-03-19 17:10:26,196 | INFO     | chi2: 2.854390250683655
[2026-03-19 13:11:35] 2026-03-19 17:10:26,196 | INFO     | current chi2=2.854390250683655 (change=17.52390776359564 %)
[2026-03-19 13:11:35] 2026-03-19 17:10:26,196 | INFO     | left removable region: 20
[2026-03-19 13:11:35] 2026-03-19 17:10:26,197 | INFO     | sum of square deviations: 8540442352.370824
[2026-03-19 13:11:35] 2026-03-19 17:10:26,198 | INFO     | sum of deviations: -83124476035.06644
[2026-03-19 13:11:35] 2026-03-19 17:10:26,199 | INFO     | mean x: 1773930618.8410597
[2026-03-19 13:11:35] 2026-03-19 17:10:26,199 | INFO     | mean y: 2237036.4569536424
[2026-03-19 13:11:35] 2026-03-19 17:10:26,199 | INFO     | intersect: 17267976576.609722
[2026-03-19 13:11:35] 2026-03-19 17:10:26,199 | INFO     | chi2: 1.0707294778813254
[2026-03-19 13:11:35] 2026-03-19 17:10:26,199 | INFO     | current memory leak: -9.73 B/s (using 302 data points, chi2=1.07)
[2026-03-19 13:11:35] 2026-03-19 17:10:26,217 | INFO     | could have reported an average CPU frequency of 3132 MHz (15 samples)
[2026-03-19 13:11:35] 2026-03-19 17:10:26,217 | INFO     | ..............................
[2026-03-19 13:11:35] 2026-03-19 17:10:26,217 | INFO     | . Timing measurements:
[2026-03-19 13:11:35] 2026-03-19 17:10:26,217 | INFO     | . get job = 0 s
[2026-03-19 13:11:35] 2026-03-19 17:10:26,217 | INFO     | . initial setup = 56 s
[2026-03-19 13:11:35] 2026-03-19 17:10:26,217 | INFO     | . payload setup = 68 s
[2026-03-19 13:11:35] 2026-03-19 17:10:26,218 | INFO     | . stage-in = 0 s
[2026-03-19 13:11:35] 2026-03-19 17:10:26,218 | INFO     | . payload execution = 20035 s
[2026-03-19 13:11:35] 2026-03-19 17:10:26,218 | INFO     | . stage-out = 8 s
[2026-03-19 13:11:35] 2026-03-19 17:10:26,218 | INFO     | . log creation = 1 s
[2026-03-19 13:11:35] 2026-03-19 17:10:26,218 | INFO     | ..............................
[2026-03-19 13:11:35] 2026-03-19 17:10:27,073 | INFO     | 
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | job summary report
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | --------------------------------------------------
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | PanDA job id: 7045292546
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | task id: 48955010
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | errors: (none)
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | pilot state: finished 
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | transexitcode: 0
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | exeerrorcode: 0
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | exeerrordiag: 
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | exitcode: 0
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | exitmsg: OK
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | cpuconsumptiontime: 35908 s
[2026-03-19 13:11:35] 2026-03-19 17:10:27,074 | INFO     | nevents: 400
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | neventsw: 0
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | pid: 2338312
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | pgrp: 2338312
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | corecount: 10
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | event service: False
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | sizes: {0: 2279087, 1: 2279772, 2: 2279772, 3: 2266178, 4: 2280289, 15: 2280289, 20109: 2313614, 20119: 2322612, 20121: 2322668, 20122: 2322862}
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | --------------------------------------------------
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | 
[2026-03-19 13:11:35] 2026-03-19 17:10:27,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 13:11:35] 2026-03-19 17:10:27,255 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,255 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,256 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | job 7045292546 has completed (purged errors)
[2026-03-19 13:11:35] 2026-03-19 17:10:27,258 | INFO     | overall cleanup function is called
[2026-03-19 13:11:35] 2026-03-19 17:10:28,279 | INFO     | --- collectZombieJob: --- 10, [2338312]
[2026-03-19 13:11:35] 2026-03-19 17:10:28,280 | INFO     | zombie collector waiting for pid 2338312
[2026-03-19 13:11:35] 2026-03-19 17:10:28,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 13:11:35] 2026-03-19 17:10:28,280 | INFO     | collected zombie processes
[2026-03-19 13:11:35] 2026-03-19 17:10:28,280 | INFO     | will attempt to kill all subprocesses of pid=2338312
[2026-03-19 13:11:35] 2026-03-19 17:10:32,122 | INFO     | PID=2329246 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-19 13:11:35] 2026-03-19 17:10:32,135 | INFO     | .. there are 51 such processes running
[2026-03-19 13:11:35] 2026-03-19 17:10:32,219 | INFO     | number of running child processes to parent process 2338312: 1
[2026-03-19 13:11:35] 2026-03-19 17:10:32,219 | INFO     | maximum number of monitored processes: 6
[2026-03-19 13:11:35] 2026-03-19 17:10:32,219 | INFO     | aborting job monitoring since job object (job id=7045292546) has expired
[2026-03-19 13:11:35] 2026-03-19 17:10:33,240 | INFO     | process IDs to be killed: [2338312] (in reverse order)
[2026-03-19 13:11:35] 2026-03-19 17:10:34,060 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 13:11:35] 2026-03-19 17:10:34,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 13:11:35] 2026-03-19 17:10:34,099 | INFO     | did not find any defunct processes belonging to 2338312
[2026-03-19 13:11:35] 2026-03-19 17:10:34,134 | INFO     | did not find any defunct processes belonging to 2338312
[2026-03-19 13:11:35] 2026-03-19 17:10:34,134 | INFO     | ready for new job
[2026-03-19 13:11:35] 2026-03-19 17:10:34,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 13:11:35] 2026-03-19 17:10:34,140 | INFO     | **************************************
[2026-03-19 13:11:35] 2026-03-19 17:10:34,140 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 13:11:35] 2026-03-19 17:10:34,140 | INFO     | **************************************
[2026-03-19 13:11:35] 2026-03-19 17:10:34,140 | INFO     | 
[2026-03-19 13:11:35] 2026-03-19 17:10:34,155 | INFO     | architecture information:
[2026-03-19 13:11:35] 2026-03-19 17:10:34,155 | INFO     | executing command: cat /etc/os-release
[2026-03-19 13:11:35] 2026-03-19 17:10:34,201 | INFO     | cat /etc/os-release:
[2026-03-19 13:11:35] NAME="CentOS Linux"
[2026-03-19 13:11:35] VERSION="7 (Core)"
[2026-03-19 13:11:35] ID="centos"
[2026-03-19 13:11:35] ID_LIKE="rhel fedora"
[2026-03-19 13:11:35] VERSION_ID="7"
[2026-03-19 13:11:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 13:11:35] ANSI_COLOR="0;31"
[2026-03-19 13:11:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 13:11:35] HOME_URL="https://www.centos.org/"
[2026-03-19 13:11:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 13:11:35] 
[2026-03-19 13:11:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 13:11:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 13:11:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 13:11:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 13:11:35] 
[2026-03-19 13:11:35] 2026-03-19 17:10:34,201 | INFO     | **************************************
[2026-03-19 13:11:35] 2026-03-19 17:10:34,705 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 13:11:35] 2026-03-19 17:10:34,878 | INFO     | sufficient remaining disk space (75108450304 B)
[2026-03-19 13:11:35] 2026-03-19 17:10:34,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 13:11:35] 2026-03-19 17:10:34,879 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 13:11:35] 2026-03-19 17:10:34,879 | INFO     | update_server=False
[2026-03-19 13:11:35] 2026-03-19 17:10:34,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 13:11:35] 2026-03-19 17:10:35,097 | INFO     | all data control threads have been joined
[2026-03-19 13:11:35] 2026-03-19 17:10:35,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 13:11:35] 2026-03-19 17:10:35,427 | INFO     | all job control threads have been joined
[2026-03-19 13:11:35] 2026-03-19 17:10:35,721 | INFO     | all payload control threads have been joined
[2026-03-19 13:11:35] 2026-03-19 17:10:35,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 13:11:35] 2026-03-19 17:10:35,748 | INFO     | aborting loop
[2026-03-19 13:11:35] 2026-03-19 17:10:35,890 | INFO     | [payload] validate_post thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:35,890 | INFO     | [payload] failed_post thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:35,898 | INFO     | [job] retrieve thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:35,933 | INFO     | [job] validate thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:35,937 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:35,998 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,104 | INFO     | [data] control thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 13:11:35] 2026-03-19 17:10:36,435 | INFO     | [job] control thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,727 | INFO     | [payload] control thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,754 | INFO     | [job] job monitor thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,831 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,866 | INFO     | [data] copytool_in thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,906 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:36,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 13:11:35] 2026-03-19 17:10:37,311 | INFO     | [job] queue monitor thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:37,311 | INFO     | [data] copytool_out thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:10:40,944 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 13:11:35] 2026-03-19 17:11:09,306 | INFO     | PID=2329246 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 13:11:35] 2026-03-19 17:11:09,306 | INFO     | .. there are 51 such processes running
[2026-03-19 13:11:35] 2026-03-19 17:11:09,306 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 13:11:35] 2026-03-19 17:11:09,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 13:11:35] 2026-03-19 17:11:09,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 13:11:35] 2026-03-19 17:11:25,133 | INFO     | [monitor] cgroup control has ended
[2026-03-19 13:11:35] 2026-03-19 17:11:26,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754473363264)>', '<ExcThread(monitor, started 139753957594880)>']
[2026-03-19 13:11:35] 2026-03-19 17:11:27,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 13:11:35] 2026-03-19 17:11:27,524 | INFO     | [monitor] control thread has ended
[2026-03-19 13:11:35] 2026-03-19 17:11:31,661 | INFO     | all workflow threads have been joined
[2026-03-19 13:11:35] 2026-03-19 17:11:31,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 13:11:35] 2026-03-19 17:11:31,662 | INFO     | traces error code: 0
[2026-03-19 13:11:35] 2026-03-19 17:11:31,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 13:11:35] 2026-03-19 17:11:32,669 [wrapper] ==== pilot stdout END ====
[2026-03-19 13:11:35] 2026-03-19 17:11:32,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 13:11:35] 2026-03-19 17:11:32,811 [wrapper] pilotpid: 2329246
[2026-03-19 13:11:35] 2026-03-19 17:11:32,841 [wrapper] Pilot exit status: 0
[2026-03-19 13:11:35] 2026-03-19 17:11:33,020 [wrapper] pandaids: 7045292546
[2026-03-19 13:11:35] 2026-03-19 17:11:34,453 [wrapper] cleanup supervisor_pilot 3250605 2329247
[2026-03-19 13:11:35] 2026-03-19 17:11:34,478 [wrapper] Test setup, not cleaning
[2026-03-19 13:11:35] 2026-03-19 17:11:34,509 [wrapper] apfmon messages muted
[2026-03-19 13:11:35] 2026-03-19 17:11:34,538 [wrapper] ==== wrapper stdout END ====
[2026-03-19 13:11:35] 2026-03-19 17:11:34,571 [wrapper] ==== wrapper stderr END ====
[2026-03-19 13:11:35]  *** Error codes and diagnostics ***
[2026-03-19 13:11:35]     "exeErrorCode": 0,
[2026-03-19 13:11:35]     "exeErrorDiag": "",
[2026-03-19 13:11:35]     "pilotErrorCode": 0,
[2026-03-19 13:11:35]     "pilotErrorDiag": "",
[2026-03-19 13:11:35]  *** Listing of results directory ***
[2026-03-19 13:11:35] total 619348
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 19:38 pilot3.tar.gz
[2026-03-19 13:11:35] -rwx------. 1 boincer umatlas     36322 Mar 13 19:41 runpilot2-wrapper.sh
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 19:44 queuedata.json
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas       100 Mar 19 07:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 13:11:35] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 07:32 run_atlas
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas       105 Mar 19 07:32 job.xml
[2026-03-19 13:11:35] -rw-r--r--. 2 boincer umatlas 439314667 Mar 19 07:32 EVNT.46701403._001715.pool.root.1
[2026-03-19 13:11:35] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 07:32 start_atlas.sh
[2026-03-19 13:11:35] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 07:32 shared
[2026-03-19 13:11:35] -rw-r--r--. 2 boincer umatlas    597532 Mar 19 07:32 input.tar.gz
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas         0 Mar 19 07:32 boinc_lockfile
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas      2562 Mar 19 07:32 pandaJob.out
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas        57 Mar 19 07:32 setup.sh.local
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas   1010732 Mar 19 07:33 agis_schedconf.cvmfs.json
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas       432 Mar 19 07:34 workernode_map.json
[2026-03-19 13:11:35] drwx------. 5 boincer umatlas      4096 Mar 19 07:34 pilot3
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas 185456385 Mar 19 13:07 HITS.48955010._035990.pool.root.1
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas       532 Mar 19 13:08 boinc_task_state.xml
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas      1039 Mar 19 13:10 memory_monitor_summary.json
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas        95 Mar 19 13:10 pilot_heartbeat.json
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas   1511579 Mar 19 13:10 agis_ddmendpoints.agis.ALL.json
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas    525266 Mar 19 13:10 log.48955010._035990.job.log.tgz.1
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas      6382 Mar 19 13:10 heartbeat.json
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas      6842 Mar 19 13:10 init_data.xml
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas      4820 Mar 19 13:11 pilotlog.txt
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas      8192 Mar 19 13:11 boinc_mmap_file
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas        28 Mar 19 13:11 wrapper_checkpoint.txt
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas   2224604 Mar 19 13:11 log.48955010._035990.job.log.1
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas       357 Mar 19 13:11 output.list
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas       620 Mar 19 13:11 runtime_log
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas   2764800 Mar 19 13:11 result.tar.gz
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas      9349 Mar 19 13:11 runtime_log.err
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas       657 Mar 19 13:11 94fKDmOJRL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLLrLDm8wKx5n.diag
[2026-03-19 13:11:35] -rw-r--r--. 1 boincer umatlas     21439 Mar 19 13:11 stderr.txt
[2026-03-19 13:11:35] HITS file was successfully produced:
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas 185456385 Mar 19 13:07 shared/HITS.pool.root.1
[2026-03-19 13:11:35]  *** Contents of shared directory: ***
[2026-03-19 13:11:35] total 613436
[2026-03-19 13:11:35] -rw-r--r--. 2 boincer umatlas 439314667 Mar 19 07:32 ATLAS.root_0
[2026-03-19 13:11:35] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 07:32 start_atlas.sh
[2026-03-19 13:11:35] -rw-r--r--. 2 boincer umatlas    597532 Mar 19 07:32 input.tar.gz
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas 185456385 Mar 19 13:07 HITS.pool.root.1
[2026-03-19 13:11:35] -rw-------. 1 boincer umatlas   2764800 Mar 19 13:11 result.tar.gz
13:11:37 (2324073): run_atlas exited; CPU time 36762.299837
13:11:37 (2324073): called boinc_finish(0)

</stderr_txt>
]]>

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