Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:43:06 (3503822): wrapper (7.7.26015): starting
05:43:06 (3503822): wrapper: running run_atlas (--nthreads 10)
[2026-03-19 05:43:06] Arguments: --nthreads 10
[2026-03-19 05:43:06] Threads: 10
[2026-03-19 05:43:06] Checking for CVMFS
[2026-03-19 05:43:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 05:43:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 05:43:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 05:43:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 05:43:08] 2.13.3.0 11048 192605 391036 157448 3 412 23851913 32935936 23656 16776704 0 429651395 99.441 651663060 38307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 05:43:08] CVMFS is ok
[2026-03-19 05:43:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 05:43:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 05:43:08] Further information can be found at the LHC@home message board.
[2026-03-19 05:43:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 05:43:08] Checking for apptainer binary...
[2026-03-19 05:43:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 05:43:08] Running /usr/bin/apptainer --version
[2026-03-19 05:43:08] apptainer version 1.4.5-2.el9
[2026-03-19 05:43:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 05:43:09] c6-1-24-2.aglt2.org
[2026-03-19 05:43:09] apptainer works
[2026-03-19 05:43:29] Set ATHENA_PROC_NUMBER=10
[2026-03-19 05:43:29] Set ATHENA_CORE_NUMBER=10
[2026-03-19 05:43:30] Starting ATLAS job with PandaID=7058365423
[2026-03-19 05:43:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 18:48:07]  *** The last 200 lines of the pilot log: ***
[2026-03-19 18:48:07] 2026-03-19 22:47:26,829 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7058365423/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 18:48:07] 2026-03-19 22:47:26,830 | INFO     | extracted standard info from prmon json
[2026-03-19 18:48:07] 2026-03-19 22:47:26,830 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 18:48:07] 2026-03-19 22:47:26,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 18:48:07] 2026-03-19 22:47:26,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 18:48:07] 2026-03-19 22:47:26,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 18:48:07] 2026-03-19 22:47:27,027 | INFO     | fitting pss+swap vs Time
[2026-03-19 18:48:07] 2026-03-19 22:47:27,028 | INFO     | sum of square deviations: 139912410165.20468
[2026-03-19 18:48:07] 2026-03-19 22:47:27,239 | INFO     | sum of deviations: 139337458988.00406
[2026-03-19 18:48:07] 2026-03-19 22:47:27,240 | INFO     | mean x: 1773937013.6714473
[2026-03-19 18:48:07] 2026-03-19 22:47:27,240 | INFO     | mean y: 2601952.726205997
[2026-03-19 18:48:07] 2026-03-19 22:47:27,240 | INFO     | intersect: -1764045306.068702
[2026-03-19 18:48:07] 2026-03-19 22:47:27,241 | INFO     | chi2: 6.977741226435002
[2026-03-19 18:48:07] 2026-03-19 22:47:27,330 | INFO     | sum of square deviations: 137194088360.43549
[2026-03-19 18:48:07] 2026-03-19 22:47:27,522 | INFO     | sum of deviations: 397896051244.5332
[2026-03-19 18:48:07] 2026-03-19 22:47:27,523 | INFO     | mean x: 1773936861.175853
[2026-03-19 18:48:07] 2026-03-19 22:47:27,523 | INFO     | mean y: 2616459.2572178477
[2026-03-19 18:48:07] 2026-03-19 22:47:27,523 | INFO     | intersect: -5142229653.678848
[2026-03-19 18:48:07] 2026-03-19 22:47:27,524 | INFO     | chi2: 3.3252222784192993
[2026-03-19 18:48:07] 2026-03-19 22:47:27,524 | INFO     | current chi2=3.3252222784192993 (change=52.34529096863357 %)
[2026-03-19 18:48:07] 2026-03-19 22:47:27,525 | INFO     | sum of square deviations: 134511116239.35275
[2026-03-19 18:48:07] 2026-03-19 22:47:27,678 | INFO     | sum of deviations: 394054501117.9747
[2026-03-19 18:48:07] 2026-03-19 22:47:27,678 | INFO     | mean x: 1773936708.677675
[2026-03-19 18:48:07] 2026-03-19 22:47:27,678 | INFO     | mean y: 2616240.9630118893
[2026-03-19 18:48:07] 2026-03-19 22:47:27,678 | INFO     | intersect: -5194186553.454173
[2026-03-19 18:48:07] 2026-03-19 22:47:27,679 | INFO     | chi2: 3.325425554533578
[2026-03-19 18:48:07] 2026-03-19 22:47:27,679 | INFO     | current chi2=3.325425554533578 (change=-0.006113158678075991 %)
[2026-03-19 18:48:07] 2026-03-19 22:47:27,679 | INFO     | right removable region: 756
[2026-03-19 18:48:07] 2026-03-19 22:47:27,680 | INFO     | sum of square deviations: 137193820753.7861
[2026-03-19 18:48:07] 2026-03-19 22:47:27,799 | INFO     | monitor loop #2493: job 0:7058365423 is in state 'finished'
[2026-03-19 18:48:07] 2026-03-19 22:47:27,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 18:48:07] 2026-03-19 22:47:27,803 | INFO     | sum of deviations: -81907101456.98558
[2026-03-19 18:48:07] 2026-03-19 22:47:27,803 | INFO     | mean x: 1773937166.1745408
[2026-03-19 18:48:07] 2026-03-19 22:47:27,804 | INFO     | mean y: 2614352.969816273
[2026-03-19 18:48:07] 2026-03-19 22:47:27,804 | INFO     | intersect: 1061685750.2810239
[2026-03-19 18:48:07] 2026-03-19 22:47:27,805 | INFO     | chi2: 4.184913416268964
[2026-03-19 18:48:07] 2026-03-19 22:47:27,805 | INFO     | current chi2=4.184913416268964 (change=40.02481203495306 %)
[2026-03-19 18:48:07] 2026-03-19 22:47:27,806 | INFO     | sum of square deviations: 134510766710.05823
[2026-03-19 18:48:07] 2026-03-19 22:47:27,818 | INFO     | sum of deviations: -148169675291.81244
[2026-03-19 18:48:07] 2026-03-19 22:47:27,819 | INFO     | mean x: 1773937318.675033
[2026-03-19 18:48:07] 2026-03-19 22:47:27,819 | INFO     | mean y: 2618114.49669749
[2026-03-19 18:48:07] 2026-03-19 22:47:27,819 | INFO     | intersect: 1956690066.689752
[2026-03-19 18:48:07] 2026-03-19 22:47:27,820 | INFO     | chi2: 3.9074322307647154
[2026-03-19 18:48:07] 2026-03-19 22:47:27,820 | INFO     | current chi2=3.9074322307647154 (change=6.630511982052798 %)
[2026-03-19 18:48:07] 2026-03-19 22:47:27,820 | INFO     | left removable region: 20
[2026-03-19 18:48:07] 2026-03-19 22:47:27,821 | INFO     | sum of square deviations: 123624057784.32616
[2026-03-19 18:48:07] 2026-03-19 22:47:27,832 | INFO     | sum of deviations: 75961105408.6739
[2026-03-19 18:48:07] 2026-03-19 22:47:27,833 | INFO     | mean x: 1773937288.1793478
[2026-03-19 18:48:07] 2026-03-19 22:47:27,833 | INFO     | mean y: 2634626.820652174
[2026-03-19 18:48:07] 2026-03-19 22:47:27,833 | INFO     | intersect: -1087365489.263978
[2026-03-19 18:48:07] 2026-03-19 22:47:27,834 | INFO     | chi2: 0.1683718358923374
[2026-03-19 18:48:07] 2026-03-19 22:47:27,834 | INFO     | current memory leak: 0.61 B/s (using 736 data points, chi2=0.17)
[2026-03-19 18:48:07] 2026-03-19 22:47:27,835 | INFO     | could have reported an average CPU frequency of 2932 MHz (29 samples)
[2026-03-19 18:48:07] 2026-03-19 22:47:27,835 | INFO     | ..............................
[2026-03-19 18:48:07] 2026-03-19 22:47:27,835 | INFO     | . Timing measurements:
[2026-03-19 18:48:07] 2026-03-19 22:47:27,835 | INFO     | . get job = 0 s
[2026-03-19 18:48:07] 2026-03-19 22:47:27,836 | INFO     | . initial setup = 40 s
[2026-03-19 18:48:07] 2026-03-19 22:47:27,836 | INFO     | . payload setup = 67 s
[2026-03-19 18:48:07] 2026-03-19 22:47:27,836 | INFO     | . stage-in = 0 s
[2026-03-19 18:48:07] 2026-03-19 22:47:27,836 | INFO     | . payload execution = 46814 s
[2026-03-19 18:48:07] 2026-03-19 22:47:27,836 | INFO     | . stage-out = 11 s
[2026-03-19 18:48:07] 2026-03-19 22:47:27,836 | INFO     | . log creation = 4 s
[2026-03-19 18:48:07] 2026-03-19 22:47:27,836 | INFO     | ..............................
[2026-03-19 18:48:07] 2026-03-19 22:47:28,503 | INFO     | 
[2026-03-19 18:48:07] 2026-03-19 22:47:28,503 | INFO     | job summary report
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | --------------------------------------------------
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | PanDA job id: 7058365423
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | task id: 49176974
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | errors: (none)
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | pilot state: finished 
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | transexitcode: 0
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | exeerrorcode: 0
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | exeerrordiag: 
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | exitcode: 0
[2026-03-19 18:48:07] 2026-03-19 22:47:28,504 | INFO     | exitmsg: OK
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | cpuconsumptiontime: 111382 s
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | nevents: 400
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | neventsw: 0
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | pid: 3520660
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | pgrp: 3520660
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | corecount: 10
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | event service: False
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | sizes: {0: 2279133, 1: 2279734, 2: 2279846, 3: 2280307, 15: 2280307, 46886: 2325557, 46887: 2325684, 46900: 2334738, 46903: 2334794, 46906: 2334988}
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | --------------------------------------------------
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | 
[2026-03-19 18:48:07] 2026-03-19 22:47:28,505 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-19 18:48:07] 2026-03-19 22:47:28,615 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | job 7058365423 has completed (purged errors)
[2026-03-19 18:48:07] 2026-03-19 22:47:28,617 | INFO     | overall cleanup function is called
[2026-03-19 18:48:07] 2026-03-19 22:47:29,721 | INFO     | --- collectZombieJob: --- 10, [3520660]
[2026-03-19 18:48:07] 2026-03-19 22:47:29,722 | INFO     | zombie collector waiting for pid 3520660
[2026-03-19 18:48:07] 2026-03-19 22:47:29,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 18:48:07] 2026-03-19 22:47:29,722 | INFO     | collected zombie processes
[2026-03-19 18:48:07] 2026-03-19 22:47:29,722 | INFO     | will attempt to kill all subprocesses of pid=3520660
[2026-03-19 18:48:07] 2026-03-19 22:47:30,351 | INFO     | PID=3512037 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-19 18:48:07] 2026-03-19 22:47:30,351 | INFO     | .. there are 45 such processes running
[2026-03-19 18:48:07] 2026-03-19 22:47:31,027 | INFO     | process IDs to be killed: [3520660] (in reverse order)
[2026-03-19 18:48:07] 2026-03-19 22:47:31,268 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 18:48:07] 2026-03-19 22:47:31,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 18:48:07] 2026-03-19 22:47:31,305 | INFO     | did not find any defunct processes belonging to 3520660
[2026-03-19 18:48:07] 2026-03-19 22:47:31,493 | INFO     | did not find any defunct processes belonging to 3520660
[2026-03-19 18:48:07] 2026-03-19 22:47:31,494 | INFO     | ready for new job
[2026-03-19 18:48:07] 2026-03-19 22:47:31,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 18:48:07] 2026-03-19 22:47:31,532 | INFO     | **************************************
[2026-03-19 18:48:07] 2026-03-19 22:47:31,533 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 18:48:07] 2026-03-19 22:47:31,533 | INFO     | **************************************
[2026-03-19 18:48:07] 2026-03-19 22:47:31,533 | INFO     | 
[2026-03-19 18:48:07] 2026-03-19 22:47:31,591 | INFO     | architecture information:
[2026-03-19 18:48:07] 2026-03-19 22:47:31,592 | INFO     | executing command: cat /etc/os-release
[2026-03-19 18:48:07] 2026-03-19 22:47:31,654 | INFO     | cat /etc/os-release:
[2026-03-19 18:48:07] NAME="CentOS Linux"
[2026-03-19 18:48:07] VERSION="7 (Core)"
[2026-03-19 18:48:07] ID="centos"
[2026-03-19 18:48:07] ID_LIKE="rhel fedora"
[2026-03-19 18:48:07] VERSION_ID="7"
[2026-03-19 18:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 18:48:07] ANSI_COLOR="0;31"
[2026-03-19 18:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 18:48:07] HOME_URL="https://www.centos.org/"
[2026-03-19 18:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 18:48:07] 
[2026-03-19 18:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 18:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 18:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 18:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 18:48:07] 
[2026-03-19 18:48:07] 2026-03-19 22:47:31,655 | INFO     | **************************************
[2026-03-19 18:48:07] 2026-03-19 22:47:32,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-19 18:48:07] 2026-03-19 22:47:32,178 | INFO     | sufficient remaining disk space (74962698240 B)
[2026-03-19 18:48:07] 2026-03-19 22:47:32,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 18:48:07] 2026-03-19 22:47:32,178 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 18:48:07] 2026-03-19 22:47:32,178 | INFO     | update_server=False
[2026-03-19 18:48:07] 2026-03-19 22:47:32,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 18:48:07] 2026-03-19 22:47:32,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 18:48:07] 2026-03-19 22:47:32,187 | INFO     | all data control threads have been joined
[2026-03-19 18:48:07] 2026-03-19 22:47:32,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 18:48:07] 2026-03-19 22:47:32,191 | INFO     | aborting loop
[2026-03-19 18:48:07] 2026-03-19 22:47:32,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 18:48:07] 2026-03-19 22:47:33,184 | INFO     | [job] retrieve thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:33,193 | INFO     | [data] control thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:33,196 | INFO     | [job] job monitor thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:33,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 18:48:07] 2026-03-19 22:47:33,473 | INFO     | [data] copytool_in thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:33,526 | INFO     | all job control threads have been joined
[2026-03-19 18:48:07] 2026-03-19 22:47:33,644 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:33,661 | INFO     | [job] validate thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:33,676 | INFO     | all payload control threads have been joined
[2026-03-19 18:48:07] 2026-03-19 22:47:33,797 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:33,860 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:34,206 | INFO     | [payload] failed_post thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:34,236 | INFO     | [job] queue monitor thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:34,271 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:34,540 | INFO     | [job] control thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:34,678 | INFO     | [payload] validate_post thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:34,682 | INFO     | [payload] control thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:34,855 | INFO     | [data] copytool_out thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:36,188 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 18:48:07] 2026-03-19 22:47:54,212 | INFO     | [monitor] cgroup control has ended
[2026-03-19 18:48:07] 2026-03-19 22:47:55,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140654130161472)>', '<ExcThread(monitor, started 140653124118272)>']
[2026-03-19 18:48:07] 2026-03-19 22:48:00,157 | INFO     | all workflow threads have been joined
[2026-03-19 18:48:07] 2026-03-19 22:48:00,157 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 18:48:07] 2026-03-19 22:48:00,158 | INFO     | traces error code: 0
[2026-03-19 18:48:07] 2026-03-19 22:48:00,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 18:48:07] 2026-03-19 22:48:04,359 | INFO     | PID=3512037 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 18:48:07] 2026-03-19 22:48:04,359 | INFO     | .. there are 45 such processes running
[2026-03-19 18:48:07] 2026-03-19 22:48:04,360 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 18:48:07] 2026-03-19 22:48:04,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 18:48:07] 2026-03-19 22:48:04,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 18:48:07] 2026-03-19 22:48:04,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 18:48:07] 2026-03-19 22:48:04,360 | INFO     | [monitor] control thread has ended
[2026-03-19 18:48:07] 2026-03-19 22:48:05,891 [wrapper] ==== pilot stdout END ====
[2026-03-19 18:48:07] 2026-03-19 22:48:05,909 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 18:48:07] 2026-03-19 22:48:05,935 [wrapper] pilotpid: 3512037
[2026-03-19 18:48:07] 2026-03-19 22:48:05,991 [wrapper] Pilot exit status: 0
[2026-03-19 18:48:07] 2026-03-19 22:48:06,188 [wrapper] pandaids: 7058365423
[2026-03-19 18:48:07] 2026-03-19 22:48:06,378 [wrapper] cleanup supervisor_pilot 1558841 3512038
[2026-03-19 18:48:07] 2026-03-19 22:48:06,389 [wrapper] Test setup, not cleaning
[2026-03-19 18:48:07] 2026-03-19 22:48:06,417 [wrapper] apfmon messages muted
[2026-03-19 18:48:07] 2026-03-19 22:48:06,461 [wrapper] ==== wrapper stdout END ====
[2026-03-19 18:48:07] 2026-03-19 22:48:06,487 [wrapper] ==== wrapper stderr END ====
[2026-03-19 18:48:07]  *** Error codes and diagnostics ***
[2026-03-19 18:48:07]     "exeErrorCode": 0,
[2026-03-19 18:48:07]     "exeErrorDiag": "",
[2026-03-19 18:48:07]     "pilotErrorCode": 0,
[2026-03-19 18:48:07]     "pilotErrorDiag": "",
[2026-03-19 18:48:07]  *** Listing of results directory ***
[2026-03-19 18:48:07] total 485128
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas      5111 Mar 18 00:11 queuedata.json
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas    585013 Mar 18 00:11 pilot3.tar.gz
[2026-03-19 18:48:07] -rwx------. 1 boincer umatlas     36322 Mar 18 00:11 runpilot2-wrapper.sh
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas       100 Mar 19 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 18:48:07] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 05:43 run_atlas
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas       105 Mar 19 05:43 job.xml
[2026-03-19 18:48:07] -rw-r--r--. 2 boincer umatlas 241891819 Mar 19 05:43 EVNT.49135955._000010.pool.root.1
[2026-03-19 18:48:07] -rw-r--r--. 2 boincer umatlas    597556 Mar 19 05:43 input.tar.gz
[2026-03-19 18:48:07] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 05:43 start_atlas.sh
[2026-03-19 18:48:07] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 05:43 shared
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas         0 Mar 19 05:43 boinc_lockfile
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas      2632 Mar 19 05:43 pandaJob.out
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas        57 Mar 19 05:43 setup.sh.local
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas   1010816 Mar 19 05:44 agis_schedconf.cvmfs.json
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas       441 Mar 19 05:45 workernode_map.json
[2026-03-19 18:48:07] drwx------. 5 boincer umatlas      4096 Mar 19 05:45 pilot3
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas 238500687 Mar 19 18:41 HITS.49176974._000503.pool.root.1
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas       532 Mar 19 18:42 boinc_task_state.xml
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas      6844 Mar 19 18:45 init_data.xml
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas      1044 Mar 19 18:47 memory_monitor_summary.json
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas   1511579 Mar 19 18:47 agis_ddmendpoints.agis.ALL.json
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas    855618 Mar 19 18:47 log.49176974._000503.job.log.tgz.1
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas      6396 Mar 19 18:47 heartbeat.json
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas      8192 Mar 19 18:47 boinc_mmap_file
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas        29 Mar 19 18:47 wrapper_checkpoint.txt
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas        95 Mar 19 18:48 pilot_heartbeat.json
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas       823 Mar 19 18:48 pilotlog.txt
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas   5368860 Mar 19 18:48 log.49176974._000503.job.log.1
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas       357 Mar 19 18:48 output.list
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas       620 Mar 19 18:48 runtime_log
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas   6246400 Mar 19 18:48 result.tar.gz
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas      9349 Mar 19 18:48 runtime_log.err
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas       660 Mar 19 18:48 JNBMDmDRxM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmeU1LDmgQd1Xo.diag
[2026-03-19 18:48:07] -rw-r--r--. 1 boincer umatlas     14308 Mar 19 18:48 stderr.txt
[2026-03-19 18:48:07] HITS file was successfully produced:
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas 238500687 Mar 19 18:41 shared/HITS.pool.root.1
[2026-03-19 18:48:07]  *** Contents of shared directory: ***
[2026-03-19 18:48:07] total 475840
[2026-03-19 18:48:07] -rw-r--r--. 2 boincer umatlas 241891819 Mar 19 05:43 ATLAS.root_0
[2026-03-19 18:48:07] -rw-r--r--. 2 boincer umatlas    597556 Mar 19 05:43 input.tar.gz
[2026-03-19 18:48:07] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 05:43 start_atlas.sh
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas 238500687 Mar 19 18:41 HITS.pool.root.1
[2026-03-19 18:48:07] -rw-------. 1 boincer umatlas   6246400 Mar 19 18:48 result.tar.gz
18:48:08 (3503822): run_atlas exited; CPU time 113459.016183
18:48:08 (3503822): called boinc_finish(0)

</stderr_txt>
]]>

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