Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:49:15 (359779): wrapper (7.7.26015): starting
02:49:15 (359779): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 02:49:15] Arguments: --nthreads 8
[2026-03-19 02:49:15] Threads: 8
[2026-03-19 02:49:15] Checking for CVMFS
[2026-03-19 02:49:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 02:49:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 02:49:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 02:49:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 02:49:17] 2.13.3.0 11502 192385 252708 157444 1 110 25851258 32935937 49283 16776704 0 1099390667 99.564 1266064110 36729 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 02:49:17] CVMFS is ok
[2026-03-19 02:49:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:49:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:49:17] Further information can be found at the LHC@home message board.
[2026-03-19 02:49:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:49:17] Checking for apptainer binary...
[2026-03-19 02:49:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 02:49:17] Running /usr/bin/apptainer --version
[2026-03-19 02:49:17] apptainer version 1.4.5-2.el9
[2026-03-19 02:49:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:49:18] c7-2-15.aglt2.org
[2026-03-19 02:49:18] apptainer works
[2026-03-19 02:49:18] Set ATHENA_PROC_NUMBER=8
[2026-03-19 02:49:18] Set ATHENA_CORE_NUMBER=8
[2026-03-19 02:49:18] Starting ATLAS job with PandaID=7049428054
[2026-03-19 02:49:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:46:44 (599100): wrapper (7.7.26015): starting
03:46:44 (599100): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 03:46:44] Arguments: --nthreads 8
[2026-03-19 03:46:44] Threads: 8
[2026-03-19 03:46:44] This job has been restarted, cleaning up previous attempt
[2026-03-19 03:46:44] Checking for CVMFS
[2026-03-19 03:46:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 03:46:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 03:46:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 03:46:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 03:46:45] 2.13.3.0 11502 192443 284148 157446 0 776 26882902 32935937 46662 16776704 0 1099617460 99.564 1266422829 36718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-19 03:46:45] CVMFS is ok
[2026-03-19 03:46:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 03:46:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 03:46:45] Further information can be found at the LHC@home message board.
[2026-03-19 03:46:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 03:46:45] Checking for apptainer binary...
[2026-03-19 03:46:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 03:46:45] Running /usr/bin/apptainer --version
[2026-03-19 03:46:45] apptainer version 1.4.5-2.el9
[2026-03-19 03:46:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 03:46:45] c7-2-15.aglt2.org
[2026-03-19 03:46:45] apptainer works
[2026-03-19 03:46:46] Set ATHENA_PROC_NUMBER=8
[2026-03-19 03:46:46] Set ATHENA_CORE_NUMBER=8
[2026-03-19 03:46:46] Starting ATLAS job with PandaID=7049428054
[2026-03-19 03:46:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 10:43:42]  *** The last 200 lines of the pilot log: ***
[2026-03-19 10:43:42] 2026-03-19 14:43:07,385 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 10:43:42] 2026-03-19 14:43:07,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 10:43:42] 2026-03-19 14:43:07,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 10:43:42] 2026-03-19 14:43:07,391 | INFO     | fitting pss+swap vs Time
[2026-03-19 10:43:42] 2026-03-19 14:43:07,391 | INFO     | sum of square deviations: 20906791729.744404
[2026-03-19 10:43:42] 2026-03-19 14:43:07,394 | INFO     | sum of deviations: 158764978770.86984
[2026-03-19 10:43:42] 2026-03-19 14:43:07,394 | INFO     | mean x: 1773918935.3144963
[2026-03-19 10:43:42] 2026-03-19 14:43:07,394 | INFO     | mean y: 2485143.8525798526
[2026-03-19 10:43:42] 2026-03-19 14:43:07,395 | INFO     | intersect: -13468553633.740543
[2026-03-19 10:43:42] 2026-03-19 14:43:07,395 | INFO     | chi2: 3.2401759718544487
[2026-03-19 10:43:42] 2026-03-19 14:43:07,395 | INFO     | sum of square deviations: 20145758870.37814
[2026-03-19 10:43:42] 2026-03-19 14:43:07,398 | INFO     | sum of deviations: 156384031799.57736
[2026-03-19 10:43:42] 2026-03-19 14:43:07,398 | INFO     | mean x: 1773918782.8159204
[2026-03-19 10:43:42] 2026-03-19 14:43:07,399 | INFO     | mean y: 2484667.534825871
[2026-03-19 10:43:42] 2026-03-19 14:43:07,399 | INFO     | intersect: -13767786937.852724
[2026-03-19 10:43:42] 2026-03-19 14:43:07,399 | INFO     | chi2: 3.240775653137122
[2026-03-19 10:43:42] 2026-03-19 14:43:07,399 | INFO     | current chi2=3.240775653137122 (change=-0.018507676369501805 %)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,399 | INFO     | right removable region: 401
[2026-03-19 10:43:42] 2026-03-19 14:43:07,399 | INFO     | sum of square deviations: 20145705861.743885
[2026-03-19 10:43:42] 2026-03-19 14:43:07,403 | INFO     | sum of deviations: 46358204291.33328
[2026-03-19 10:43:42] 2026-03-19 14:43:07,403 | INFO     | mean x: 1773919087.818408
[2026-03-19 10:43:42] 2026-03-19 14:43:07,403 | INFO     | mean y: 2507621.3333333335
[2026-03-19 10:43:42] 2026-03-19 14:43:07,403 | INFO     | intersect: -4079538648.66332
[2026-03-19 10:43:42] 2026-03-19 14:43:07,403 | INFO     | chi2: 0.25868111934834825
[2026-03-19 10:43:42] 2026-03-19 14:43:07,403 | INFO     | current chi2=0.25868111934834825 (change=92.01644843998095 %)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,404 | INFO     | sum of square deviations: 19403318018.730705
[2026-03-19 10:43:42] 2026-03-19 14:43:07,407 | INFO     | sum of deviations: 13072824996.60957
[2026-03-19 10:43:42] 2026-03-19 14:43:07,407 | INFO     | mean x: 1773919240.3224182
[2026-03-19 10:43:42] 2026-03-19 14:43:07,407 | INFO     | mean y: 2514447.44836272
[2026-03-19 10:43:42] 2026-03-19 14:43:07,407 | INFO     | intersect: -1192648965.554883
[2026-03-19 10:43:42] 2026-03-19 14:43:07,407 | INFO     | chi2: 0.017441244267881646
[2026-03-19 10:43:42] 2026-03-19 14:43:07,407 | INFO     | current chi2=0.017441244267881646 (change=93.2576276491232 %)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,408 | INFO     | sum of square deviations: 18679395638.20406
[2026-03-19 10:43:42] 2026-03-19 14:43:07,411 | INFO     | sum of deviations: 9088610085.285715
[2026-03-19 10:43:42] 2026-03-19 14:43:07,411 | INFO     | mean x: 1773919392.8265307
[2026-03-19 10:43:42] 2026-03-19 14:43:07,411 | INFO     | mean y: 2515278.3571428573
[2026-03-19 10:43:42] 2026-03-19 14:43:07,411 | INFO     | intersect: -860599460.2777964
[2026-03-19 10:43:42] 2026-03-19 14:43:07,411 | INFO     | chi2: 0.005235351787286085
[2026-03-19 10:43:42] 2026-03-19 14:43:07,411 | INFO     | current chi2=0.005235351787286085 (change=69.98292262366238 %)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,412 | INFO     | sum of square deviations: 17973706157.664135
[2026-03-19 10:43:42] 2026-03-19 14:43:07,414 | INFO     | sum of deviations: 10410305038.571062
[2026-03-19 10:43:42] 2026-03-19 14:43:07,415 | INFO     | mean x: 1773919545.3307493
[2026-03-19 10:43:42] 2026-03-19 14:43:07,415 | INFO     | mean y: 2514992.2377260984
[2026-03-19 10:43:42] 2026-03-19 14:43:07,415 | INFO     | intersect: -1024932737.172376
[2026-03-19 10:43:42] 2026-03-19 14:43:07,415 | INFO     | chi2: 0.004566937539680449
[2026-03-19 10:43:42] 2026-03-19 14:43:07,415 | INFO     | current chi2=0.004566937539680449 (change=12.767322517445018 %)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,415 | INFO     | left removable region: 40
[2026-03-19 10:43:42] 2026-03-19 14:43:07,416 | INFO     | sum of square deviations: 14589110905.717438
[2026-03-19 10:43:42] 2026-03-19 14:43:07,418 | INFO     | sum of deviations: 8629838796.41274
[2026-03-19 10:43:42] 2026-03-19 14:43:07,418 | INFO     | mean x: 1773919972.3462603
[2026-03-19 10:43:42] 2026-03-19 14:43:07,418 | INFO     | mean y: 2515212.268698061
[2026-03-19 10:43:42] 2026-03-19 14:43:07,418 | INFO     | intersect: -1046804619.3521413
[2026-03-19 10:43:42] 2026-03-19 14:43:07,419 | INFO     | chi2: 0.0017447021753783677
[2026-03-19 10:43:42] 2026-03-19 14:43:07,419 | INFO     | current memory leak: 0.59 B/s (using 361 data points, chi2=0.00)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,419 | INFO     | could have reported an average CPU frequency of 3343 MHz (17 samples)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,419 | INFO     | ..............................
[2026-03-19 10:43:42] 2026-03-19 14:43:07,419 | INFO     | . Timing measurements:
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | . get job = 0 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | . initial setup = 3 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | . payload setup = 45 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | . stage-in = 0 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | . payload execution = 24853 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | . stage-out = 4 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | . log creation = 0 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,420 | INFO     | ..............................
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | 
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | job summary report
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | --------------------------------------------------
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | PanDA job id: 7049428054
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | task id: 48967085
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | errors: (none)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | pilot state: finished 
[2026-03-19 10:43:42] 2026-03-19 14:43:07,489 | INFO     | transexitcode: 0
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | exeerrorcode: 0
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | exeerrordiag: 
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | exitcode: 0
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | exitmsg: OK
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | cpuconsumptiontime: 38551 s
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | nevents: 400
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | neventsw: 0
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | pid: 627683
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | pgrp: 627683
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | corecount: 8
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | event service: False
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | sizes: {0: 2279749, 1: 2279833, 2: 2280294, 12: 2280294, 24903: 2315564, 24904: 2315563, 24909: 2324801, 24911: 2325003}
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | --------------------------------------------------
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | 
[2026-03-19 10:43:42] 2026-03-19 14:43:07,490 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-19 10:43:42] 2026-03-19 14:43:07,614 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,614 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,614 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,614 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,615 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 10:43:42] 2026-03-19 14:43:07,616 | INFO     | job 7049428054 has completed (purged errors)
[2026-03-19 10:43:42] 2026-03-19 14:43:07,616 | INFO     | overall cleanup function is called
[2026-03-19 10:43:42] 2026-03-19 14:43:08,649 | INFO     | --- collectZombieJob: --- 10, [627683]
[2026-03-19 10:43:42] 2026-03-19 14:43:08,649 | INFO     | zombie collector waiting for pid 627683
[2026-03-19 10:43:42] 2026-03-19 14:43:08,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 10:43:42] 2026-03-19 14:43:08,649 | INFO     | collected zombie processes
[2026-03-19 10:43:42] 2026-03-19 14:43:08,649 | INFO     | will attempt to kill all subprocesses of pid=627683
[2026-03-19 10:43:42] 2026-03-19 14:43:11,520 | INFO     | process IDs to be killed: [627683] (in reverse order)
[2026-03-19 10:43:42] 2026-03-19 14:43:11,861 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 10:43:42] 2026-03-19 14:43:11,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 10:43:42] 2026-03-19 14:43:11,930 | INFO     | did not find any defunct processes belonging to 627683
[2026-03-19 10:43:42] 2026-03-19 14:43:12,005 | INFO     | did not find any defunct processes belonging to 627683
[2026-03-19 10:43:42] 2026-03-19 14:43:12,006 | INFO     | ready for new job
[2026-03-19 10:43:42] 2026-03-19 14:43:12,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 10:43:42] 2026-03-19 14:43:12,020 | INFO     | **************************************
[2026-03-19 10:43:42] 2026-03-19 14:43:12,020 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 10:43:42] 2026-03-19 14:43:12,020 | INFO     | **************************************
[2026-03-19 10:43:42] 2026-03-19 14:43:12,020 | INFO     | 
[2026-03-19 10:43:42] 2026-03-19 14:43:12,063 | INFO     | architecture information:
[2026-03-19 10:43:42] 2026-03-19 14:43:12,066 | INFO     | executing command: cat /etc/os-release
[2026-03-19 10:43:42] 2026-03-19 14:43:12,163 | INFO     | cat /etc/os-release:
[2026-03-19 10:43:42] NAME="CentOS Linux"
[2026-03-19 10:43:42] VERSION="7 (Core)"
[2026-03-19 10:43:42] ID="centos"
[2026-03-19 10:43:42] ID_LIKE="rhel fedora"
[2026-03-19 10:43:42] VERSION_ID="7"
[2026-03-19 10:43:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 10:43:42] ANSI_COLOR="0;31"
[2026-03-19 10:43:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 10:43:42] HOME_URL="https://www.centos.org/"
[2026-03-19 10:43:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 10:43:42] 
[2026-03-19 10:43:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 10:43:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 10:43:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 10:43:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 10:43:42] 
[2026-03-19 10:43:42] 2026-03-19 14:43:12,163 | INFO     | **************************************
[2026-03-19 10:43:42] 2026-03-19 14:43:12,667 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-19 10:43:42] 2026-03-19 14:43:12,840 | INFO     | sufficient remaining disk space (74320969728 B)
[2026-03-19 10:43:42] 2026-03-19 14:43:12,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 10:43:42] 2026-03-19 14:43:12,840 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 10:43:42] 2026-03-19 14:43:12,840 | INFO     | update_server=False
[2026-03-19 10:43:42] 2026-03-19 14:43:12,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 10:43:42] 2026-03-19 14:43:12,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 10:43:42] 2026-03-19 14:43:12,841 | INFO     | aborting loop
[2026-03-19 10:43:42] 2026-03-19 14:43:12,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 10:43:42] 2026-03-19 14:43:12,928 | INFO     | all payload control threads have been joined
[2026-03-19 10:43:42] 2026-03-19 14:43:12,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 10:43:42] 2026-03-19 14:43:13,745 | INFO     | all data control threads have been joined
[2026-03-19 10:43:42] 2026-03-19 14:43:13,847 | INFO     | [job] queue monitor thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:13,847 | INFO     | [job] retrieve thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:13,847 | INFO     | [job] job monitor thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:13,935 | INFO     | [payload] control thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:13,983 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:13,983 | INFO     | [job] validate thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:14,256 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:14,281 | INFO     | all job control threads have been joined
[2026-03-19 10:43:42] 2026-03-19 14:43:14,615 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:14,752 | INFO     | [data] control thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:14,835 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:14,885 | INFO     | [data] copytool_in thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:14,936 | INFO     | [data] copytool_out thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:15,229 | INFO     | [payload] validate_post thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:15,290 | INFO     | [job] control thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:15,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 10:43:42] 2026-03-19 14:43:15,443 | INFO     | [payload] failed_post thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:19,405 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 10:43:42] 2026-03-19 14:43:26,614 | INFO     | [monitor] cgroup control has ended
[2026-03-19 10:43:42] 2026-03-19 14:43:28,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480486106944)>', '<ExcThread(monitor, started 140479681242880)>']
[2026-03-19 10:43:42] 2026-03-19 14:43:33,369 | INFO     | all workflow threads have been joined
[2026-03-19 10:43:42] 2026-03-19 14:43:33,370 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 10:43:42] 2026-03-19 14:43:33,370 | INFO     | traces error code: 0
[2026-03-19 10:43:42] 2026-03-19 14:43:33,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 10:43:42] 2026-03-19 14:43:40,734 | INFO     | PID=615088 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-19 10:43:42] 2026-03-19 14:43:40,735 | INFO     | .. there are 79 such processes running
[2026-03-19 10:43:42] 2026-03-19 14:43:40,735 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 10:43:42] 2026-03-19 14:43:40,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 10:43:42] 2026-03-19 14:43:40,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 10:43:42] 2026-03-19 14:43:40,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 10:43:42] 2026-03-19 14:43:40,735 | INFO     | [monitor] control thread has ended
[2026-03-19 10:43:42] 2026-03-19 14:43:40,920 [wrapper] ==== pilot stdout END ====
[2026-03-19 10:43:42] 2026-03-19 14:43:40,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 10:43:42] 2026-03-19 14:43:41,013 [wrapper] pilotpid: 615088
[2026-03-19 10:43:42] 2026-03-19 14:43:41,046 [wrapper] Pilot exit status: 0
[2026-03-19 10:43:42] 2026-03-19 14:43:41,175 [wrapper] pandaids: 7049428054 7049428054
[2026-03-19 10:43:42] 2026-03-19 14:43:42,024 [wrapper] cleanup supervisor_pilot 2023496 615089
[2026-03-19 10:43:42] 2026-03-19 14:43:42,076 [wrapper] Test setup, not cleaning
[2026-03-19 10:43:42] 2026-03-19 14:43:42,108 [wrapper] apfmon messages muted
[2026-03-19 10:43:42] 2026-03-19 14:43:42,150 [wrapper] ==== wrapper stdout END ====
[2026-03-19 10:43:42] 2026-03-19 14:43:42,191 [wrapper] ==== wrapper stderr END ====
[2026-03-19 10:43:42]  *** Error codes and diagnostics ***
[2026-03-19 10:43:43]     "exeErrorCode": 0,
[2026-03-19 10:43:43]     "exeErrorDiag": "",
[2026-03-19 10:43:43]     "pilotErrorCode": 0,
[2026-03-19 10:43:43]     "pilotErrorDiag": "",
[2026-03-19 10:43:43]  *** Listing of results directory ***
[2026-03-19 10:43:43] total 620612
[2026-03-19 10:43:43] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas    585013 Mar 10 22:46 pilot3.tar.gz
[2026-03-19 10:43:43] -rwx------. 1 boincer umatlas     36322 Mar 10 23:01 runpilot2-wrapper.sh
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 23:02 queuedata.json
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas       100 Mar 19 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 10:43:43] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 19 02:49 run_atlas
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas       105 Mar 19 02:49 job.xml
[2026-03-19 10:43:43] -rw-r--r--. 3 boincer umatlas 210992760 Mar 19 02:49 EVNT.48967083._000261.pool.root.1
[2026-03-19 10:43:43] -rw-r--r--. 3 boincer umatlas 210992760 Mar 19 02:49 ATLAS.root_0
[2026-03-19 10:43:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 02:49 start_atlas.sh
[2026-03-19 10:43:43] drwxrwx--x. 2 boincer umatlas      4096 Mar 19 02:49 shared
[2026-03-19 10:43:43] -rw-r--r--. 2 boincer umatlas    597515 Mar 19 02:49 input.tar.gz
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas         0 Mar 19 02:49 boinc_lockfile
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas      2561 Mar 19 03:46 pandaJob.out
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas        57 Mar 19 03:46 setup.sh.local
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas   1010808 Mar 19 03:47 agis_schedconf.cvmfs.json
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas       428 Mar 19 03:47 workernode_map.json
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas      6945 Mar 19 10:38 init_data.xml
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas 202429748 Mar 19 10:41 HITS.48967085._006516.pool.root.1
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas       531 Mar 19 10:42 boinc_task_state.xml
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas        96 Mar 19 10:42 pilot_heartbeat.json
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas      1041 Mar 19 10:42 memory_monitor_summary.json
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas   1511579 Mar 19 10:43 agis_ddmendpoints.agis.ALL.json
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas    582419 Mar 19 10:43 log.48967085._006516.job.log.tgz.1
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas      6340 Mar 19 10:43 heartbeat.json
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas      8192 Mar 19 10:43 boinc_mmap_file
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas       822 Mar 19 10:43 pilotlog.txt
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas        28 Mar 19 10:43 wrapper_checkpoint.txt
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas   2990198 Mar 19 10:43 log.48967085._006516.job.log.1
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas       357 Mar 19 10:43 output.list
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas       620 Mar 19 10:43 runtime_log
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas   3594240 Mar 19 10:43 result.tar.gz
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas      9422 Mar 19 10:43 runtime_log.err
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas       784 Mar 19 10:43 Rc8LDmQ0OK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3OfLDmQElKFo.diag
[2026-03-19 10:43:43] -rw-r--r--. 1 boincer umatlas     22933 Mar 19 10:43 stderr.txt
[2026-03-19 10:43:43] HITS file was successfully produced:
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas 202429748 Mar 19 10:41 shared/HITS.pool.root.1
[2026-03-19 10:43:43]  *** Contents of shared directory: ***
[2026-03-19 10:43:43] total 407852
[2026-03-19 10:43:43] -rw-r--r--. 3 boincer umatlas 210992760 Mar 19 02:49 ATLAS.root_0
[2026-03-19 10:43:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 19 02:49 start_atlas.sh
[2026-03-19 10:43:43] -rw-r--r--. 2 boincer umatlas    597515 Mar 19 02:49 input.tar.gz
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas 202429748 Mar 19 10:41 HITS.pool.root.1
[2026-03-19 10:43:43] -rw-------. 1 boincer umatlas   3594240 Mar 19 10:43 result.tar.gz
10:43:44 (599100): run_atlas exited; CPU time 40029.132961
10:43:44 (599100): called boinc_finish(0)

</stderr_txt>
]]>

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