Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:24:26 (5604): wrapper (7.7.26015): starting
01:24:26 (5604): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 01:24:26] Arguments: --nthreads 12
[2026-03-19 01:24:26] Threads: 12
[2026-03-19 01:24:26] Checking for CVMFS
[2026-03-19 01:24:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 01:24:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 01:24:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 01:24:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 01:24:26] 2.11.2.0 30551 279919 97996 157443 2 1 10964247 20275200 1 130560 0 117551107 99.921 15466622 28520 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-19 01:24:26] CVMFS is ok
[2026-03-19 01:24:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 01:24:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 01:24:26] Further information can be found at the LHC@home message board.
[2026-03-19 01:24:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 01:24:26] Checking for apptainer binary...
[2026-03-19 01:24:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 01:24:26] Running /usr/bin/apptainer --version
[2026-03-19 01:24:26] apptainer version 1.3.2-1.el7
[2026-03-19 01:24:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 01:24:28] c-205-16.aglt2.org
[2026-03-19 01:24:28] apptainer works
[2026-03-19 01:24:28] Set ATHENA_PROC_NUMBER=12
[2026-03-19 01:24:28] Set ATHENA_CORE_NUMBER=12
[2026-03-19 01:24:28] Starting ATLAS job with PandaID=7049374878
[2026-03-19 01:24:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 02:50:26]  *** The last 200 lines of the pilot log: ***
[2026-03-19 02:50:26]  guid=6a7b6715-7842-4c67-91ab-c85e82d8ebce
[2026-03-19 02:50:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-19 02:50:26]  is_altstaged=None
[2026-03-19 02:50:26]  is_tar=False
[2026-03-19 02:50:26]  lfn=log.48967085._004725.job.log.tgz.1
[2026-03-19 02:50:26]  mtime=0
[2026-03-19 02:50:26]  protocol_id=None
[2026-03-19 02:50:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 02:50:26]  replicas=None
[2026-03-19 02:50:26]  scope=mc23_13p6TeV
[2026-03-19 02:50:26]  status=None
[2026-03-19 02:50:26]  status_code=0
[2026-03-19 02:50:26]  storage_token=
[2026-03-19 02:50:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7049374878/log.48967085._004725.job.log.tgz.1
[2026-03-19 02:50:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/3c/log.48967085._004725.job.log.tgz.1
[2026-03-19 02:50:26]  workdir=None
[2026-03-19 02:50:26] ]
[2026-03-19 02:50:26] 2026-03-19 06:49:50,716 | INFO     | transferring file log.48967085._004725.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7049374878/log.48967085._004725.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-19 02:50:26] 2026-03-19 06:49:50,716 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7049374878/log.48967085._004725.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._004725.job
[2026-03-19 02:50:26] 2026-03-19 06:49:50,738 | INFO     | adding to output.list: log.48967085._004725.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/3c/log.48967085._004725.job.log.tg
[2026-03-19 02:50:26] 2026-03-19 06:49:50,739 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 02:50:26] 2026-03-19 06:49:50,739 | INFO     | summary of transferred files:
[2026-03-19 02:50:26] 2026-03-19 06:49:50,740 | INFO     |  -- lfn=log.48967085._004725.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 02:50:26] 2026-03-19 06:49:50,740 | INFO     | stage-out finished correctly
[2026-03-19 02:50:26] 2026-03-19 06:49:50,992 | INFO     | time since job start (5100s) is within the limit (345600.0s)
[2026-03-19 02:50:26] 2026-03-19 06:49:51,650 | INFO     | monitor loop #389: job 0:7049374878 is in state 'finished'
[2026-03-19 02:50:26] 2026-03-19 06:49:51,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 02:50:26] 2026-03-19 06:49:52,997 | INFO     | time since job start (5102s) is within the limit (345600.0s)
[2026-03-19 02:50:26] 2026-03-19 06:49:53,133 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 02:50:26] 2026-03-19 06:49:54,153 | INFO     | monitor loop #390: job 0:7049374878 is in state 'finished'
[2026-03-19 02:50:26] 2026-03-19 06:49:54,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,242 | INFO     | job 7049374878 has state=finished
[2026-03-19 02:50:26] 2026-03-19 06:49:54,243 | INFO     | preparing for final server update for job 7049374878 in state='finished'
[2026-03-19 02:50:26] 2026-03-19 06:49:54,243 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7049374878/jobReport.json
[2026-03-19 02:50:26] 2026-03-19 06:49:54,246 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-19 02:50:26] 2026-03-19 06:49:54,246 | INFO     | this job has now completed (state=finished)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,247 | INFO     | log transfer has been attempted: DONE
[2026-03-19 02:50:26] 2026-03-19 06:49:54,247 | INFO     | job 7049374878 has finished - writing final server update
[2026-03-19 02:50:26] 2026-03-19 06:49:54,247 | INFO     | total number of processed events: 400 (read)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,250 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049374878/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,251 | INFO     | extracted standard info from prmon json
[2026-03-19 02:50:26] 2026-03-19 06:49:54,251 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 02:50:26] 2026-03-19 06:49:54,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 02:50:26] 2026-03-19 06:49:54,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 02:50:26] 2026-03-19 06:49:54,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 02:50:26] 2026-03-19 06:49:54,253 | INFO     | fitting pss+swap vs Time
[2026-03-19 02:50:26] 2026-03-19 06:49:54,253 | INFO     | sum of square deviations: 141539398.0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,254 | INFO     | sum of deviations: -10464299656.0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,254 | INFO     | mean x: 1773900544.0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,254 | INFO     | mean y: 2848867.5454545454
[2026-03-19 02:50:26] 2026-03-19 06:49:54,254 | INFO     | intersect: 131150975217.19557
[2026-03-19 02:50:26] 2026-03-19 06:49:54,254 | INFO     | chi2: 0.0691806018731125
[2026-03-19 02:50:26] 2026-03-19 06:49:54,254 | INFO     | current memory leak: -73.93 B/s (using 77 data points, chi2=0.07)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | could have reported an average CPU frequency of 1751 MHz (6 samples)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | ..............................
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | . Timing measurements:
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | . get job = 0 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | . initial setup = 7 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | . payload setup = 14 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | . stage-in = 0 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,255 | INFO     | . payload execution = 5069 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,256 | INFO     | . stage-out = 0 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,256 | INFO     | . log creation = 0 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,256 | INFO     | ..............................
[2026-03-19 02:50:26] 2026-03-19 06:49:54,331 | INFO     | 
[2026-03-19 02:50:26] 2026-03-19 06:49:54,332 | INFO     | job summary report
[2026-03-19 02:50:26] 2026-03-19 06:49:54,332 | INFO     | --------------------------------------------------
[2026-03-19 02:50:26] 2026-03-19 06:49:54,332 | INFO     | PanDA job id: 7049374878
[2026-03-19 02:50:26] 2026-03-19 06:49:54,332 | INFO     | task id: 48967085
[2026-03-19 02:50:26] 2026-03-19 06:49:54,332 | INFO     | errors: (none)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 02:50:26] 2026-03-19 06:49:54,332 | INFO     | pilot state: finished 
[2026-03-19 02:50:26] 2026-03-19 06:49:54,333 | INFO     | transexitcode: 0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,333 | INFO     | exeerrorcode: 0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,333 | INFO     | exeerrordiag: 
[2026-03-19 02:50:26] 2026-03-19 06:49:54,333 | INFO     | exitcode: 0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,333 | INFO     | exitmsg: OK
[2026-03-19 02:50:26] 2026-03-19 06:49:54,333 | INFO     | cpuconsumptiontime: 55544 s
[2026-03-19 02:50:26] 2026-03-19 06:49:54,334 | INFO     | nevents: 400
[2026-03-19 02:50:26] 2026-03-19 06:49:54,334 | INFO     | neventsw: 0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,334 | INFO     | pid: 13900
[2026-03-19 02:50:26] 2026-03-19 06:49:54,334 | INFO     | pgrp: 13900
[2026-03-19 02:50:26] 2026-03-19 06:49:54,334 | INFO     | corecount: 12
[2026-03-19 02:50:26] 2026-03-19 06:49:54,334 | INFO     | event service: False
[2026-03-19 02:50:26] 2026-03-19 06:49:54,334 | INFO     | sizes: {0: 2279805, 1: 2280266, 12: 2280266, 5087: 2306646, 5089: 2315644, 5091: 2315700, 5092: 2316022}
[2026-03-19 02:50:26] 2026-03-19 06:49:54,335 | INFO     | --------------------------------------------------
[2026-03-19 02:50:26] 2026-03-19 06:49:54,335 | INFO     | 
[2026-03-19 02:50:26] 2026-03-19 06:49:54,335 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 02:50:26] 2026-03-19 06:49:54,406 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,409 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,409 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 02:50:26] 2026-03-19 06:49:54,409 | INFO     | job 7049374878 has completed (purged errors)
[2026-03-19 02:50:26] 2026-03-19 06:49:54,410 | INFO     | overall cleanup function is called
[2026-03-19 02:50:26] 2026-03-19 06:49:55,418 | INFO     | --- collectZombieJob: --- 10, [13900]
[2026-03-19 02:50:26] 2026-03-19 06:49:55,418 | INFO     | zombie collector waiting for pid 13900
[2026-03-19 02:50:26] 2026-03-19 06:49:55,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 02:50:26] 2026-03-19 06:49:55,419 | INFO     | collected zombie processes
[2026-03-19 02:50:26] 2026-03-19 06:49:55,419 | INFO     | will attempt to kill all subprocesses of pid=13900
[2026-03-19 02:50:26] 2026-03-19 06:49:55,506 | INFO     | process IDs to be killed: [13900] (in reverse order)
[2026-03-19 02:50:26] 2026-03-19 06:49:55,559 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 02:50:26] 2026-03-19 06:49:55,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 02:50:26] 2026-03-19 06:49:55,563 | INFO     | did not find any defunct processes belonging to 13900
[2026-03-19 02:50:26] 2026-03-19 06:49:55,565 | INFO     | did not find any defunct processes belonging to 13900
[2026-03-19 02:50:26] 2026-03-19 06:49:55,565 | INFO     | ready for new job
[2026-03-19 02:50:26] 2026-03-19 06:49:55,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 02:50:26] 2026-03-19 06:49:55,566 | INFO     | **************************************
[2026-03-19 02:50:26] 2026-03-19 06:49:55,566 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 02:50:26] 2026-03-19 06:49:55,566 | INFO     | **************************************
[2026-03-19 02:50:26] 2026-03-19 06:49:55,566 | INFO     | 
[2026-03-19 02:50:26] 2026-03-19 06:49:55,567 | INFO     | architecture information:
[2026-03-19 02:50:26] 2026-03-19 06:49:55,567 | INFO     | executing command: cat /etc/os-release
[2026-03-19 02:50:26] 2026-03-19 06:49:55,582 | INFO     | cat /etc/os-release:
[2026-03-19 02:50:26] NAME="CentOS Linux"
[2026-03-19 02:50:26] VERSION="7 (Core)"
[2026-03-19 02:50:26] ID="centos"
[2026-03-19 02:50:26] ID_LIKE="rhel fedora"
[2026-03-19 02:50:26] VERSION_ID="7"
[2026-03-19 02:50:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 02:50:26] ANSI_COLOR="0;31"
[2026-03-19 02:50:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 02:50:26] HOME_URL="https://www.centos.org/"
[2026-03-19 02:50:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 02:50:26] 
[2026-03-19 02:50:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 02:50:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 02:50:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 02:50:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 02:50:26] 
[2026-03-19 02:50:26] 2026-03-19 06:49:55,583 | INFO     | **************************************
[2026-03-19 02:50:26] 2026-03-19 06:49:56,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 02:50:26] 2026-03-19 06:49:56,102 | INFO     | sufficient remaining disk space (29478617088 B)
[2026-03-19 02:50:26] 2026-03-19 06:49:56,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 02:50:26] 2026-03-19 06:49:56,103 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 02:50:26] 2026-03-19 06:49:56,103 | INFO     | update_server=False
[2026-03-19 02:50:26] 2026-03-19 06:49:56,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 02:50:26] 2026-03-19 06:49:56,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:50:26] 2026-03-19 06:49:56,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:50:26] 2026-03-19 06:49:56,104 | INFO     | aborting loop
[2026-03-19 02:50:26] 2026-03-19 06:49:56,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 02:50:26] 2026-03-19 06:49:56,455 | INFO     | all payload control threads have been joined
[2026-03-19 02:50:26] 2026-03-19 06:49:56,521 | INFO     | all job control threads have been joined
[2026-03-19 02:50:26] 2026-03-19 06:49:56,585 | INFO     | all data control threads have been joined
[2026-03-19 02:50:26] 2026-03-19 06:49:57,109 | INFO     | [job] retrieve thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,110 | INFO     | [job] queue monitor thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,110 | INFO     | [job] job monitor thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,170 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,310 | INFO     | [data] copytool_in thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,369 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,457 | INFO     | [payload] control thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,526 | INFO     | [job] control thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,589 | INFO     | [data] control thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:57,796 | INFO     | [monitor] cgroup control has ended
[2026-03-19 02:50:26] 2026-03-19 06:49:57,941 | INFO     | [payload] validate_post thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:58,335 | INFO     | [data] copytool_out thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:58,374 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:58,383 | INFO     | [job] validate thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:58,544 | INFO     | [payload] failed_post thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:49:59,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 02:50:26] 2026-03-19 06:50:03,224 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:50:06,513 | INFO     | job.realtimelogging is not enabled
[2026-03-19 02:50:26] 2026-03-19 06:50:07,519 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 02:50:26] 2026-03-19 06:50:07,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677821769536)>', '<ExcThread(monitor, started 140676863870720)>']
[2026-03-19 02:50:26] 2026-03-19 06:50:12,893 | INFO     | all workflow threads have been joined
[2026-03-19 02:50:26] 2026-03-19 06:50:12,894 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 02:50:26] 2026-03-19 06:50:12,894 | INFO     | traces error code: 0
[2026-03-19 02:50:26] 2026-03-19 06:50:12,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 02:50:26] 2026-03-19 06:50:26,212 | INFO     | PID=9311 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-19 02:50:26] 2026-03-19 06:50:26,223 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 02:50:26] 2026-03-19 06:50:26,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 02:50:26] 2026-03-19 06:50:26,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 02:50:26] 2026-03-19 06:50:26,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 02:50:26] 2026-03-19 06:50:26,224 | INFO     | [monitor] control thread has ended
[2026-03-19 02:50:26] 2026-03-19 06:50:26,329 [wrapper] ==== pilot stdout END ====
[2026-03-19 02:50:26] 2026-03-19 06:50:26,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 02:50:26] 2026-03-19 06:50:26,336 [wrapper] pilotpid: 9311
[2026-03-19 02:50:26] 2026-03-19 06:50:26,340 [wrapper] Pilot exit status: 0
[2026-03-19 02:50:26] 2026-03-19 06:50:26,355 [wrapper] pandaids: 7049374878
[2026-03-19 02:50:26] 2026-03-19 06:50:26,400 [wrapper] cleanup supervisor_pilot 13277 9312
[2026-03-19 02:50:26] 2026-03-19 06:50:26,404 [wrapper] Test setup, not cleaning
[2026-03-19 02:50:26] 2026-03-19 06:50:26,408 [wrapper] apfmon messages muted
[2026-03-19 02:50:26] 2026-03-19 06:50:26,412 [wrapper] ==== wrapper stdout END ====
[2026-03-19 02:50:26] 2026-03-19 06:50:26,416 [wrapper] ==== wrapper stderr END ====
[2026-03-19 02:50:26]  *** Error codes and diagnostics ***
[2026-03-19 02:50:26]     "exeErrorCode": 0,
[2026-03-19 02:50:26]     "exeErrorDiag": "",
[2026-03-19 02:50:26]     "pilotErrorCode": 0,
[2026-03-19 02:50:26]     "pilotErrorDiag": "",
[2026-03-19 02:50:26]  *** Listing of results directory ***
[2026-03-19 02:50:26] total 408844
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas    585013 Mar 10 22:01 pilot3.tar.gz
[2026-03-19 02:50:26] -rwx------ 1 boincer umatlas     36322 Mar 10 22:01 runpilot2-wrapper.sh
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas      5111 Mar 10 22:02 queuedata.json
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas       100 Mar 19 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 02:50:26] -rwxr-xr-x 1 boincer umatlas      7986 Mar 19 01:24 run_atlas
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas       105 Mar 19 01:24 job.xml
[2026-03-19 02:50:26] -rw-r--r-- 2 boincer umatlas 214003704 Mar 19 01:24 EVNT.48967083._000189.pool.root.1
[2026-03-19 02:50:26] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 01:24 start_atlas.sh
[2026-03-19 02:50:26] drwxrwx--x 2 boincer umatlas      4096 Mar 19 01:24 shared
[2026-03-19 02:50:26] -rw-r--r-- 2 boincer umatlas    597523 Mar 19 01:24 input.tar.gz
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas         0 Mar 19 01:24 boinc_lockfile
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas      2561 Mar 19 01:24 pandaJob.out
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas        57 Mar 19 01:24 setup.sh.local
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas   1010817 Mar 19 01:24 agis_schedconf.cvmfs.json
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas   1511579 Mar 19 01:24 agis_ddmendpoints.agis.ALL.json
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas       445 Mar 19 01:24 workernode_map.json
[2026-03-19 02:50:26] drwx------ 5 boincer umatlas      4096 Mar 19 01:24 pilot3
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas      5952 Mar 19 02:46 init_data.xml
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas 198431664 Mar 19 02:49 HITS.48967085._004725.pool.root.1
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas       529 Mar 19 02:49 boinc_task_state.xml
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas      1047 Mar 19 02:49 memory_monitor_summary.json
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas    406387 Mar 19 02:49 log.48967085._004725.job.log.tgz.1
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas        95 Mar 19 02:49 pilot_heartbeat.json
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas      6421 Mar 19 02:49 heartbeat.json
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas      8192 Mar 19 02:50 boinc_mmap_file
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas        27 Mar 19 02:50 wrapper_checkpoint.txt
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas       744 Mar 19 02:50 pilotlog.txt
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas    735463 Mar 19 02:50 log.48967085._004725.job.log.1
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas       357 Mar 19 02:50 output.list
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas       620 Mar 19 02:50 runtime_log
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas   1157120 Mar 19 02:50 result.tar.gz
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas      9343 Mar 19 02:50 runtime_log.err
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas       659 Mar 19 02:50 aXXMDmY4NK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmY7eLDmuXkjMo.diag
[2026-03-19 02:50:26] -rw-r--r-- 1 boincer umatlas     21374 Mar 19 02:50 stderr.txt
[2026-03-19 02:50:26] HITS file was successfully produced:
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas 198431664 Mar 19 02:49 shared/HITS.pool.root.1
[2026-03-19 02:50:26]  *** Contents of shared directory: ***
[2026-03-19 02:50:26] total 404508
[2026-03-19 02:50:26] -rw-r--r-- 2 boincer umatlas 214003704 Mar 19 01:24 ATLAS.root_0
[2026-03-19 02:50:26] -rw-r--r-- 2 boincer umatlas     15845 Mar 19 01:24 start_atlas.sh
[2026-03-19 02:50:26] -rw-r--r-- 2 boincer umatlas    597523 Mar 19 01:24 input.tar.gz
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas 198431664 Mar 19 02:49 HITS.pool.root.1
[2026-03-19 02:50:26] -rw------- 1 boincer umatlas   1157120 Mar 19 02:50 result.tar.gz
02:50:28 (5604): run_atlas exited; CPU time 55517.964402
02:50:28 (5604): called boinc_finish(0)

</stderr_txt>
]]>

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