Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:11:07 (5883): wrapper (7.7.26015): starting
23:11:07 (5883): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 23:11:07] Arguments: --nthreads 12
[2026-03-18 23:11:07] Threads: 12
[2026-03-18 23:11:07] Checking for CVMFS
[2026-03-18 23:11:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 23:11:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 23:11:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 23:11:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 23:11:08] 2.11.2.0 2925 449845 100688 157438 2 1 11227004 20275201 1 130560 1 195160503 99.954 25701143 17428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 23:11:08] CVMFS is ok
[2026-03-18 23:11:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 23:11:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 23:11:08] Further information can be found at the LHC@home message board.
[2026-03-18 23:11:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 23:11:08] Checking for apptainer binary...
[2026-03-18 23:11:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 23:11:08] Running /usr/bin/apptainer --version
[2026-03-18 23:11:08] apptainer version 1.3.2-1.el7
[2026-03-18 23:11:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 23:11:10] c-205-9.aglt2.org
[2026-03-18 23:11:10] apptainer works
[2026-03-18 23:11:10] Set ATHENA_PROC_NUMBER=12
[2026-03-18 23:11:10] Set ATHENA_CORE_NUMBER=12
[2026-03-18 23:11:10] Starting ATLAS job with PandaID=7049257304
[2026-03-18 23:11:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 00:45:00]  *** The last 200 lines of the pilot log: ***
[2026-03-19 00:45:00]  guid=86d2c9bb-6676-4647-8eb9-264da1272485
[2026-03-19 00:45:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-19 00:45:00]  is_altstaged=None
[2026-03-19 00:45:00]  is_tar=False
[2026-03-19 00:45:00]  lfn=log.48967011._007556.job.log.tgz.1
[2026-03-19 00:45:00]  mtime=0
[2026-03-19 00:45:00]  protocol_id=None
[2026-03-19 00:45:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 00:45:00]  replicas=None
[2026-03-19 00:45:00]  scope=mc23_13p6TeV
[2026-03-19 00:45:00]  status=None
[2026-03-19 00:45:00]  status_code=0
[2026-03-19 00:45:00]  storage_token=
[2026-03-19 00:45:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7049257304/log.48967011._007556.job.log.tgz.1
[2026-03-19 00:45:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/40/log.48967011._007556.job.log.tgz.1
[2026-03-19 00:45:00]  workdir=None
[2026-03-19 00:45:00] ]
[2026-03-19 00:45:00] 2026-03-19 04:44:23,718 | INFO     | transferring file log.48967011._007556.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7049257304/log.48967011._007556.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-19 00:45:00] 2026-03-19 04:44:23,718 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7049257304/log.48967011._007556.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967011._007556.job
[2026-03-19 00:45:00] 2026-03-19 04:44:23,741 | INFO     | adding to output.list: log.48967011._007556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/40/log.48967011._007556.job.log.tg
[2026-03-19 00:45:00] 2026-03-19 04:44:23,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 00:45:00] 2026-03-19 04:44:23,742 | INFO     | summary of transferred files:
[2026-03-19 00:45:00] 2026-03-19 04:44:23,742 | INFO     |  -- lfn=log.48967011._007556.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 00:45:00] 2026-03-19 04:44:23,742 | INFO     | stage-out finished correctly
[2026-03-19 00:45:00] 2026-03-19 04:44:24,544 | INFO     | monitor loop #424: job 0:7049257304 is in state 'finished'
[2026-03-19 00:45:00] 2026-03-19 04:44:24,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 00:45:00] 2026-03-19 04:44:25,385 | INFO     | time since job start (5571s) is within the limit (345600.0s)
[2026-03-19 00:45:00] 2026-03-19 04:44:26,111 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 00:45:00] 2026-03-19 04:44:27,047 | INFO     | monitor loop #425: job 0:7049257304 is in state 'finished'
[2026-03-19 00:45:00] 2026-03-19 04:44:27,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 00:45:00] 2026-03-19 04:44:27,391 | INFO     | time since job start (5573s) is within the limit (345600.0s)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,012 | INFO     | job 7049257304 has state=finished
[2026-03-19 00:45:00] 2026-03-19 04:44:28,012 | INFO     | preparing for final server update for job 7049257304 in state='finished'
[2026-03-19 00:45:00] 2026-03-19 04:44:28,013 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7049257304/jobReport.json
[2026-03-19 00:45:00] 2026-03-19 04:44:28,016 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-19 00:45:00] 2026-03-19 04:44:28,016 | INFO     | this job has now completed (state=finished)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,016 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,016 | INFO     | log transfer has been attempted: DONE
[2026-03-19 00:45:00] 2026-03-19 04:44:28,017 | INFO     | job 7049257304 has finished - writing final server update
[2026-03-19 00:45:00] 2026-03-19 04:44:28,017 | INFO     | total number of processed events: 400 (read)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,019 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049257304/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,020 | INFO     | extracted standard info from prmon json
[2026-03-19 00:45:00] 2026-03-19 04:44:28,020 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 00:45:00] 2026-03-19 04:44:28,020 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 00:45:00] 2026-03-19 04:44:28,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 00:45:00] 2026-03-19 04:44:28,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 00:45:00] 2026-03-19 04:44:28,022 | INFO     | fitting pss+swap vs Time
[2026-03-19 00:45:00] 2026-03-19 04:44:28,022 | INFO     | sum of square deviations: 183761585.0
[2026-03-19 00:45:00] 2026-03-19 04:44:28,023 | INFO     | sum of deviations: 750506789.9999999
[2026-03-19 00:45:00] 2026-03-19 04:44:28,023 | INFO     | mean x: 1773892762.5
[2026-03-19 00:45:00] 2026-03-19 04:44:28,023 | INFO     | mean y: 2710874.1904761903
[2026-03-19 00:45:00] 2026-03-19 04:44:28,023 | INFO     | intersect: -7242103448.607769
[2026-03-19 00:45:00] 2026-03-19 04:44:28,023 | INFO     | chi2: 0.09154314485807333
[2026-03-19 00:45:00] 2026-03-19 04:44:28,023 | INFO     | current memory leak: 4.08 B/s (using 84 data points, chi2=0.09)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,024 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,024 | INFO     | ..............................
[2026-03-19 00:45:00] 2026-03-19 04:44:28,024 | INFO     | . Timing measurements:
[2026-03-19 00:45:00] 2026-03-19 04:44:28,024 | INFO     | . get job = 0 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,024 | INFO     | . initial setup = 7 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,024 | INFO     | . payload setup = 15 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,024 | INFO     | . stage-in = 0 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,025 | INFO     | . payload execution = 5537 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,025 | INFO     | . stage-out = 0 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,025 | INFO     | . log creation = 0 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,025 | INFO     | ..............................
[2026-03-19 00:45:00] 2026-03-19 04:44:28,102 | INFO     | 
[2026-03-19 00:45:00] 2026-03-19 04:44:28,102 | INFO     | job summary report
[2026-03-19 00:45:00] 2026-03-19 04:44:28,102 | INFO     | --------------------------------------------------
[2026-03-19 00:45:00] 2026-03-19 04:44:28,103 | INFO     | PanDA job id: 7049257304
[2026-03-19 00:45:00] 2026-03-19 04:44:28,103 | INFO     | task id: 48967011
[2026-03-19 00:45:00] 2026-03-19 04:44:28,103 | INFO     | errors: (none)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,103 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 00:45:00] 2026-03-19 04:44:28,103 | INFO     | pilot state: finished 
[2026-03-19 00:45:00] 2026-03-19 04:44:28,103 | INFO     | transexitcode: 0
[2026-03-19 00:45:00] 2026-03-19 04:44:28,104 | INFO     | exeerrorcode: 0
[2026-03-19 00:45:00] 2026-03-19 04:44:28,104 | INFO     | exeerrordiag: 
[2026-03-19 00:45:00] 2026-03-19 04:44:28,104 | INFO     | exitcode: 0
[2026-03-19 00:45:00] 2026-03-19 04:44:28,104 | INFO     | exitmsg: OK
[2026-03-19 00:45:00] 2026-03-19 04:44:28,104 | INFO     | cpuconsumptiontime: 60090 s
[2026-03-19 00:45:00] 2026-03-19 04:44:28,104 | INFO     | nevents: 400
[2026-03-19 00:45:00] 2026-03-19 04:44:28,105 | INFO     | neventsw: 0
[2026-03-19 00:45:00] 2026-03-19 04:44:28,105 | INFO     | pid: 14359
[2026-03-19 00:45:00] 2026-03-19 04:44:28,105 | INFO     | pgrp: 14359
[2026-03-19 00:45:00] 2026-03-19 04:44:28,105 | INFO     | corecount: 12
[2026-03-19 00:45:00] 2026-03-19 04:44:28,105 | INFO     | event service: False
[2026-03-19 00:45:00] 2026-03-19 04:44:28,105 | INFO     | sizes: {0: 2280238, 11: 2280238, 5556: 2306933, 5558: 2315931, 5560: 2315987, 5562: 2316181}
[2026-03-19 00:45:00] 2026-03-19 04:44:28,105 | INFO     | --------------------------------------------------
[2026-03-19 00:45:00] 2026-03-19 04:44:28,106 | INFO     | 
[2026-03-19 00:45:00] 2026-03-19 04:44:28,106 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-19 00:45:00] 2026-03-19 04:44:28,131 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,132 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,132 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,132 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,134 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,135 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 00:45:00] 2026-03-19 04:44:28,135 | INFO     | job 7049257304 has completed (purged errors)
[2026-03-19 00:45:00] 2026-03-19 04:44:28,135 | INFO     | overall cleanup function is called
[2026-03-19 00:45:00] 2026-03-19 04:44:29,144 | INFO     | --- collectZombieJob: --- 10, [14359]
[2026-03-19 00:45:00] 2026-03-19 04:44:29,144 | INFO     | zombie collector waiting for pid 14359
[2026-03-19 00:45:00] 2026-03-19 04:44:29,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 00:45:00] 2026-03-19 04:44:29,144 | INFO     | collected zombie processes
[2026-03-19 00:45:00] 2026-03-19 04:44:29,144 | INFO     | will attempt to kill all subprocesses of pid=14359
[2026-03-19 00:45:00] 2026-03-19 04:44:29,231 | INFO     | process IDs to be killed: [14359] (in reverse order)
[2026-03-19 00:45:00] 2026-03-19 04:44:29,282 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 00:45:00] 2026-03-19 04:44:29,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 00:45:00] 2026-03-19 04:44:29,286 | INFO     | did not find any defunct processes belonging to 14359
[2026-03-19 00:45:00] 2026-03-19 04:44:29,290 | INFO     | did not find any defunct processes belonging to 14359
[2026-03-19 00:45:00] 2026-03-19 04:44:29,290 | INFO     | ready for new job
[2026-03-19 00:45:00] 2026-03-19 04:44:29,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 00:45:00] 2026-03-19 04:44:29,291 | INFO     | **************************************
[2026-03-19 00:45:00] 2026-03-19 04:44:29,291 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 00:45:00] 2026-03-19 04:44:29,291 | INFO     | **************************************
[2026-03-19 00:45:00] 2026-03-19 04:44:29,291 | INFO     | 
[2026-03-19 00:45:00] 2026-03-19 04:44:29,292 | INFO     | architecture information:
[2026-03-19 00:45:00] 2026-03-19 04:44:29,292 | INFO     | executing command: cat /etc/os-release
[2026-03-19 00:45:00] 2026-03-19 04:44:29,307 | INFO     | cat /etc/os-release:
[2026-03-19 00:45:00] NAME="CentOS Linux"
[2026-03-19 00:45:00] VERSION="7 (Core)"
[2026-03-19 00:45:00] ID="centos"
[2026-03-19 00:45:00] ID_LIKE="rhel fedora"
[2026-03-19 00:45:00] VERSION_ID="7"
[2026-03-19 00:45:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 00:45:00] ANSI_COLOR="0;31"
[2026-03-19 00:45:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 00:45:00] HOME_URL="https://www.centos.org/"
[2026-03-19 00:45:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 00:45:00] 
[2026-03-19 00:45:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 00:45:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 00:45:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 00:45:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 00:45:00] 
[2026-03-19 00:45:00] 2026-03-19 04:44:29,307 | INFO     | **************************************
[2026-03-19 00:45:00] 2026-03-19 04:44:29,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-19 00:45:00] 2026-03-19 04:44:29,826 | INFO     | sufficient remaining disk space (29321330688 B)
[2026-03-19 00:45:00] 2026-03-19 04:44:29,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 00:45:00] 2026-03-19 04:44:29,827 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 00:45:00] 2026-03-19 04:44:29,827 | INFO     | update_server=False
[2026-03-19 00:45:00] 2026-03-19 04:44:29,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 00:45:00] 2026-03-19 04:44:29,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:45:00] 2026-03-19 04:44:29,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 00:45:00] 2026-03-19 04:44:29,969 | INFO     | all payload control threads have been joined
[2026-03-19 00:45:00] 2026-03-19 04:44:30,085 | INFO     | all job control threads have been joined
[2026-03-19 00:45:00] 2026-03-19 04:44:30,257 | INFO     | all data control threads have been joined
[2026-03-19 00:45:00] 2026-03-19 04:44:30,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:45:00] 2026-03-19 04:44:30,559 | INFO     | aborting loop
[2026-03-19 00:45:00] 2026-03-19 04:44:30,833 | INFO     | [job] retrieve thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:30,833 | INFO     | [job] queue monitor thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:30,975 | INFO     | [payload] control thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:30,984 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,049 | INFO     | [payload] validate_post thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,088 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,091 | INFO     | [job] control thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,262 | INFO     | [data] control thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,439 | INFO     | [data] copytool_in thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,560 | INFO     | [job] job monitor thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,624 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,834 | INFO     | [data] copytool_out thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:31,906 | INFO     | [job] validate thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:32,122 | INFO     | [payload] failed_post thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:32,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 00:45:00] 2026-03-19 04:44:36,203 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:40,739 | INFO     | job.realtimelogging is not enabled
[2026-03-19 00:45:00] 2026-03-19 04:44:41,744 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 00:45:00] 2026-03-19 04:44:42,485 | INFO     | [monitor] cgroup control has ended
[2026-03-19 00:45:00] 2026-03-19 04:44:43,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687496382272)>', '<ExcThread(monitor, started 140686611441408)>']
[2026-03-19 00:45:00] 2026-03-19 04:44:48,383 | INFO     | all workflow threads have been joined
[2026-03-19 00:45:00] 2026-03-19 04:44:48,383 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 00:45:00] 2026-03-19 04:44:48,383 | INFO     | traces error code: 0
[2026-03-19 00:45:00] 2026-03-19 04:44:48,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 00:45:00] 2026-03-19 04:45:00,595 | INFO     | PID=9939 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-19 00:45:00] 2026-03-19 04:45:00,596 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 00:45:00] 2026-03-19 04:45:00,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 00:45:00] 2026-03-19 04:45:00,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 00:45:00] 2026-03-19 04:45:00,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 00:45:00] 2026-03-19 04:45:00,596 | INFO     | [monitor] control thread has ended
[2026-03-19 00:45:00] 2026-03-19 04:45:00,685 [wrapper] ==== pilot stdout END ====
[2026-03-19 00:45:00] 2026-03-19 04:45:00,689 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 00:45:00] 2026-03-19 04:45:00,693 [wrapper] pilotpid: 9939
[2026-03-19 00:45:00] 2026-03-19 04:45:00,697 [wrapper] Pilot exit status: 0
[2026-03-19 00:45:00] 2026-03-19 04:45:00,712 [wrapper] pandaids: 7049257304
[2026-03-19 00:45:00] 2026-03-19 04:45:00,750 [wrapper] cleanup supervisor_pilot  7615 9940
[2026-03-19 00:45:00] 2026-03-19 04:45:00,753 [wrapper] Test setup, not cleaning
[2026-03-19 00:45:00] 2026-03-19 04:45:00,757 [wrapper] apfmon messages muted
[2026-03-19 00:45:00] 2026-03-19 04:45:00,761 [wrapper] ==== wrapper stdout END ====
[2026-03-19 00:45:00] 2026-03-19 04:45:00,765 [wrapper] ==== wrapper stderr END ====
[2026-03-19 00:45:00]  *** Error codes and diagnostics ***
[2026-03-19 00:45:00]     "exeErrorCode": 0,
[2026-03-19 00:45:00]     "exeErrorDiag": "",
[2026-03-19 00:45:00]     "pilotErrorCode": 0,
[2026-03-19 00:45:00]     "pilotErrorDiag": "",
[2026-03-19 00:45:00]  *** Listing of results directory ***
[2026-03-19 00:45:00] total 423120
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas    585013 Mar 10 19:17 pilot3.tar.gz
[2026-03-19 00:45:00] -rwx------ 1 boincer umatlas     36322 Mar 10 19:18 runpilot2-wrapper.sh
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas      5111 Mar 10 19:18 queuedata.json
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas       100 Mar 18 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 00:45:00] -rwxr-xr-x 1 boincer umatlas      7986 Mar 18 23:11 run_atlas
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas       105 Mar 18 23:11 job.xml
[2026-03-19 00:45:00] -rw-r--r-- 2 boincer umatlas 218797111 Mar 18 23:11 EVNT.48967008._000297.pool.root.1
[2026-03-19 00:45:00] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 23:11 start_atlas.sh
[2026-03-19 00:45:00] drwxrwx--x 2 boincer umatlas      4096 Mar 18 23:11 shared
[2026-03-19 00:45:00] -rw-r--r-- 2 boincer umatlas    597525 Mar 18 23:11 input.tar.gz
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas         0 Mar 18 23:11 boinc_lockfile
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas      2561 Mar 18 23:11 pandaJob.out
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas        57 Mar 18 23:11 setup.sh.local
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas   1010438 Mar 18 23:11 agis_schedconf.cvmfs.json
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas   1511579 Mar 18 23:11 agis_ddmendpoints.agis.ALL.json
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas       444 Mar 18 23:11 workernode_map.json
[2026-03-19 00:45:00] drwx------ 5 boincer umatlas      4096 Mar 18 23:11 pilot3
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas      5952 Mar 19 00:38 init_data.xml
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas 208117644 Mar 19 00:43 HITS.48967011._007556.pool.root.1
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas       529 Mar 19 00:44 boinc_task_state.xml
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas      1046 Mar 19 00:44 memory_monitor_summary.json
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas    411998 Mar 19 00:44 log.48967011._007556.job.log.tgz.1
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas      6430 Mar 19 00:44 heartbeat.json
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas      8192 Mar 19 00:44 boinc_mmap_file
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas        27 Mar 19 00:44 wrapper_checkpoint.txt
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas        95 Mar 19 00:45 pilot_heartbeat.json
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas       744 Mar 19 00:45 pilotlog.txt
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas    800114 Mar 19 00:45 log.48967011._007556.job.log.1
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas       357 Mar 19 00:45 output.list
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas       620 Mar 19 00:45 runtime_log
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas   1228800 Mar 19 00:45 result.tar.gz
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas      9338 Mar 19 00:45 runtime_log.err
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas       659 Mar 19 00:45 9m8KDmRWLK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3heLDmMZ4mtm.diag
[2026-03-19 00:45:00] -rw-r--r-- 1 boincer umatlas     21363 Mar 19 00:45 stderr.txt
[2026-03-19 00:45:00] HITS file was successfully produced:
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas 208117644 Mar 19 00:43 shared/HITS.pool.root.1
[2026-03-19 00:45:00]  *** Contents of shared directory: ***
[2026-03-19 00:45:00] total 418716
[2026-03-19 00:45:00] -rw-r--r-- 2 boincer umatlas 218797111 Mar 18 23:11 ATLAS.root_0
[2026-03-19 00:45:00] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 23:11 start_atlas.sh
[2026-03-19 00:45:00] -rw-r--r-- 2 boincer umatlas    597525 Mar 18 23:11 input.tar.gz
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas 208117644 Mar 19 00:43 HITS.pool.root.1
[2026-03-19 00:45:00] -rw------- 1 boincer umatlas   1228800 Mar 19 00:45 result.tar.gz
00:45:02 (5883): run_atlas exited; CPU time 60071.580862
00:45:02 (5883): called boinc_finish(0)

</stderr_txt>
]]>

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