Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:51:12 (3846360): wrapper (7.7.26015): starting
20:51:12 (3846360): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 20:51:12] Arguments: --nthreads 8
[2026-03-18 20:51:12] Threads: 8
[2026-03-18 20:51:12] Checking for CVMFS
[2026-03-18 20:51:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 20:51:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 20:51:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 20:51:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 20:51:12] 2.13.3.0 12357 192026 395972 157435 3 427 31132674 32503809 47159 16776704 0 2581409420 99.633 2432440277 46202 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-18 20:51:12] CVMFS is ok
[2026-03-18 20:51:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 20:51:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 20:51:12] Further information can be found at the LHC@home message board.
[2026-03-18 20:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 20:51:12] Checking for apptainer binary...
[2026-03-18 20:51:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 20:51:12] Running /usr/bin/apptainer --version
[2026-03-18 20:51:12] apptainer version 1.4.5-2.el9
[2026-03-18 20:51:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 20:51:13] c8-7-2.aglt2.org
[2026-03-18 20:51:13] apptainer works
[2026-03-18 20:51:13] Set ATHENA_PROC_NUMBER=8
[2026-03-18 20:51:13] Set ATHENA_CORE_NUMBER=8
[2026-03-18 20:51:13] Starting ATLAS job with PandaID=7057257787
[2026-03-18 20:51:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 21:51:39]  *** The last 200 lines of the pilot log: ***
[2026-03-18 21:51:39]  is_tar=False
[2026-03-18 21:51:39]  lfn=log.48967085._025212.job.log.tgz.1
[2026-03-18 21:51:39]  mtime=0
[2026-03-18 21:51:39]  protocol_id=None
[2026-03-18 21:51:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 21:51:39]  replicas=None
[2026-03-18 21:51:39]  scope=mc23_13p6TeV
[2026-03-18 21:51:39]  status=None
[2026-03-18 21:51:39]  status_code=0
[2026-03-18 21:51:39]  storage_token=
[2026-03-18 21:51:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7057257787/log.48967085._025212.job.log.tgz.1
[2026-03-18 21:51:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/86/log.48967085._025212.job.log.tgz.1
[2026-03-18 21:51:39]  workdir=None
[2026-03-18 21:51:39] ]
[2026-03-18 21:51:39] 2026-03-19 01:50:46,682 | INFO     | transferring file log.48967085._025212.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7057257787/log.48967085._025212.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-18 21:51:39] 2026-03-19 01:50:46,683 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7057257787/log.48967085._025212.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._025212.job
[2026-03-18 21:51:39] 2026-03-19 01:50:46,698 | INFO     | adding to output.list: log.48967085._025212.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/86/log.48967085._025212.job.log.tg
[2026-03-18 21:51:39] 2026-03-19 01:50:46,699 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 21:51:39] 2026-03-19 01:50:46,699 | INFO     | summary of transferred files:
[2026-03-18 21:51:39] 2026-03-19 01:50:46,699 | INFO     |  -- lfn=log.48967085._025212.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 21:51:39] 2026-03-19 01:50:46,699 | INFO     | stage-out finished correctly
[2026-03-18 21:51:39] 2026-03-19 01:50:47,059 | INFO     | PID=3850226 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-18 21:51:39] 2026-03-19 01:50:47,060 | INFO     | .. there are 22 such processes running
[2026-03-18 21:51:39] 2026-03-19 01:50:48,060 | INFO     | time since job start (3561s) is within the limit (345600.0s)
[2026-03-18 21:51:39] 2026-03-19 01:50:48,513 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 21:51:39] 2026-03-19 01:50:48,866 | INFO     | job 7057257787 has state=finished
[2026-03-18 21:51:39] 2026-03-19 01:50:48,866 | INFO     | preparing for final server update for job 7057257787 in state='finished'
[2026-03-18 21:51:39] 2026-03-19 01:50:48,867 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7057257787/jobReport.json
[2026-03-18 21:51:39] 2026-03-19 01:50:48,868 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-18 21:51:39] 2026-03-19 01:50:48,868 | INFO     | this job has now completed (state=finished)
[2026-03-18 21:51:39] 2026-03-19 01:50:48,868 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 21:51:39] 2026-03-19 01:50:48,868 | INFO     | log transfer has been attempted: DONE
[2026-03-18 21:51:39] 2026-03-19 01:50:48,868 | INFO     | job 7057257787 has finished - writing final server update
[2026-03-18 21:51:39] 2026-03-19 01:50:48,869 | INFO     | total number of processed events: 400 (read)
[2026-03-18 21:51:39] 2026-03-19 01:50:48,881 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057257787/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:51:39] 2026-03-19 01:50:48,881 | INFO     | extracted standard info from prmon json
[2026-03-18 21:51:39] 2026-03-19 01:50:48,881 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 21:51:39] 2026-03-19 01:50:48,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 21:51:39] 2026-03-19 01:50:48,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 21:51:39] 2026-03-19 01:50:48,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 21:51:39] 2026-03-19 01:50:48,882 | INFO     | fitting pss+swap vs Time
[2026-03-18 21:51:39] 2026-03-19 01:50:48,882 | INFO     | sum of square deviations: 41117050.0
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | sum of deviations: -1747135343.0
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | mean x: 1773883342.0
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | mean y: 2573119.098039216
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | intersect: 75377977754.57545
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | chi2: 0.011098333386113282
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | current memory leak: -42.49 B/s (using 51 data points, chi2=0.01)
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | could have reported an average CPU frequency of 3799 MHz (5 samples)
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | ..............................
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . Timing measurements:
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . get job = 0 s
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . initial setup = 6 s
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . payload setup = 8 s
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . stage-in = 0 s
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . payload execution = 3535 s
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . stage-out = 0 s
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | . log creation = 0 s
[2026-03-18 21:51:39] 2026-03-19 01:50:48,883 | INFO     | ..............................
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | 
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | job summary report
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | --------------------------------------------------
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | PanDA job id: 7057257787
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | task id: 48967085
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | errors: (none)
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | pilot state: finished 
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | transexitcode: 0
[2026-03-18 21:51:39] 2026-03-19 01:50:49,070 | INFO     | exeerrorcode: 0
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | exeerrordiag: 
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | exitcode: 0
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | exitmsg: OK
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | cpuconsumptiontime: 25068 s
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | nevents: 400
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | neventsw: 0
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | pid: 3858989
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | pgrp: 3858989
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | corecount: 8
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | event service: False
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | sizes: {0: 2280131, 11: 2280131, 3547: 2305897, 3548: 2314895, 3550: 2315177}
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | --------------------------------------------------
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | 
[2026-03-18 21:51:39] 2026-03-19 01:50:49,071 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-18 21:51:39] 2026-03-19 01:50:49,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | job 7057257787 has completed (purged errors)
[2026-03-18 21:51:39] 2026-03-19 01:50:49,088 | INFO     | overall cleanup function is called
[2026-03-18 21:51:39] 2026-03-19 01:50:50,096 | INFO     | --- collectZombieJob: --- 10, [3858989]
[2026-03-18 21:51:39] 2026-03-19 01:50:50,096 | INFO     | zombie collector waiting for pid 3858989
[2026-03-18 21:51:39] 2026-03-19 01:50:50,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 21:51:39] 2026-03-19 01:50:50,096 | INFO     | collected zombie processes
[2026-03-18 21:51:39] 2026-03-19 01:50:50,096 | INFO     | will attempt to kill all subprocesses of pid=3858989
[2026-03-18 21:51:39] 2026-03-19 01:50:50,392 | INFO     | process IDs to be killed: [3858989] (in reverse order)
[2026-03-18 21:51:39] 2026-03-19 01:50:50,539 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 21:51:39] 2026-03-19 01:50:50,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 21:51:39] 2026-03-19 01:50:50,565 | INFO     | did not find any defunct processes belonging to 3858989
[2026-03-18 21:51:39] 2026-03-19 01:50:50,588 | INFO     | did not find any defunct processes belonging to 3858989
[2026-03-18 21:51:39] 2026-03-19 01:50:50,588 | INFO     | ready for new job
[2026-03-18 21:51:39] 2026-03-19 01:50:50,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 21:51:39] 2026-03-19 01:50:50,589 | INFO     | **************************************
[2026-03-18 21:51:39] 2026-03-19 01:50:50,590 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 21:51:39] 2026-03-19 01:50:50,590 | INFO     | **************************************
[2026-03-18 21:51:39] 2026-03-19 01:50:50,590 | INFO     | 
[2026-03-18 21:51:39] 2026-03-19 01:50:50,593 | INFO     | architecture information:
[2026-03-18 21:51:39] 2026-03-19 01:50:50,593 | INFO     | executing command: cat /etc/os-release
[2026-03-18 21:51:39] 2026-03-19 01:50:50,605 | INFO     | cat /etc/os-release:
[2026-03-18 21:51:39] NAME="CentOS Linux"
[2026-03-18 21:51:39] VERSION="7 (Core)"
[2026-03-18 21:51:39] ID="centos"
[2026-03-18 21:51:39] ID_LIKE="rhel fedora"
[2026-03-18 21:51:39] VERSION_ID="7"
[2026-03-18 21:51:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 21:51:39] ANSI_COLOR="0;31"
[2026-03-18 21:51:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 21:51:39] HOME_URL="https://www.centos.org/"
[2026-03-18 21:51:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 21:51:39] 
[2026-03-18 21:51:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 21:51:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 21:51:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 21:51:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 21:51:39] 
[2026-03-18 21:51:39] 2026-03-19 01:50:50,606 | INFO     | **************************************
[2026-03-18 21:51:39] 2026-03-19 01:50:51,109 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 21:51:39] 2026-03-19 01:50:51,119 | INFO     | sufficient remaining disk space (96158613504 B)
[2026-03-18 21:51:39] 2026-03-19 01:50:51,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 21:51:39] 2026-03-19 01:50:51,119 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 21:51:39] 2026-03-19 01:50:51,119 | INFO     | update_server=False
[2026-03-18 21:51:39] 2026-03-19 01:50:51,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 21:51:39] 2026-03-19 01:50:51,362 | INFO     | all data control threads have been joined
[2026-03-18 21:51:39] 2026-03-19 01:50:52,069 | INFO     | all payload control threads have been joined
[2026-03-18 21:51:39] 2026-03-19 01:50:52,124 | INFO     | [job] retrieve thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:52,142 | INFO     | [job] validate thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:52,187 | INFO     | all job control threads have been joined
[2026-03-18 21:51:39] 2026-03-19 01:50:52,189 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:52,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 21:51:39] 2026-03-19 01:50:52,367 | INFO     | [data] control thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:52,618 | WARNING  | process 3858989 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 21:51:39] 2026-03-19 01:50:52,656 | INFO     | [data] copytool_in thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:52,781 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:52,849 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:51:39] 2026-03-19 01:50:53,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:53,074 | INFO     | [payload] control thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:53,109 | INFO     | [payload] failed_post thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:53,138 | INFO     | number of running child processes to parent process 3858989: 1
[2026-03-18 21:51:39] 2026-03-19 01:50:53,138 | INFO     | maximum number of monitored processes: 6
[2026-03-18 21:51:39] 2026-03-19 01:50:53,138 | INFO     | aborting job monitoring since job object (job id=7057257787) has expired
[2026-03-18 21:51:39] 2026-03-19 01:50:53,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:51:39] 2026-03-19 01:50:53,138 | INFO     | will abort loop
[2026-03-18 21:51:39] 2026-03-19 01:50:53,192 | INFO     | [job] control thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:53,235 | INFO     | [payload] validate_post thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:53,508 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:53,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:51:39] 2026-03-19 01:50:54,143 | INFO     | [job] job monitor thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:54,263 | INFO     | [data] copytool_out thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:54,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 21:51:39] 2026-03-19 01:50:54,950 | INFO     | [job] queue monitor thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:50:58,576 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 21:51:39] 2026-03-19 01:51:21,003 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-03-18 21:51:39] 2026-03-19 01:51:21,599 | INFO     | PID=3850226 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 21:51:39] 2026-03-19 01:51:21,599 | INFO     | .. there are 22 such processes running
[2026-03-18 21:51:39] 2026-03-19 01:51:21,599 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 21:51:39] 2026-03-19 01:51:21,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 21:51:39] 2026-03-19 01:51:21,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 21:51:39] 2026-03-19 01:51:33,132 | INFO     | [monitor] cgroup control has ended
[2026-03-18 21:51:39] 2026-03-19 01:51:33,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338485143360)>', '<ExcThread(monitor, started 140337704064768)>']
[2026-03-18 21:51:39] 2026-03-19 01:51:34,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 21:51:39] 2026-03-19 01:51:34,664 | INFO     | [monitor] control thread has ended
[2026-03-18 21:51:39] 2026-03-19 01:51:38,828 | INFO     | all workflow threads have been joined
[2026-03-18 21:51:39] 2026-03-19 01:51:38,829 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 21:51:39] 2026-03-19 01:51:38,829 | INFO     | traces error code: 0
[2026-03-18 21:51:39] 2026-03-19 01:51:38,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 21:51:39] 2026-03-19 01:51:38,940 [wrapper] ==== pilot stdout END ====
[2026-03-18 21:51:39] 2026-03-19 01:51:38,943 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 21:51:39] 2026-03-19 01:51:38,945 [wrapper] pilotpid: 3850226
[2026-03-18 21:51:39] 2026-03-19 01:51:38,948 [wrapper] Pilot exit status: 0
[2026-03-18 21:51:39] 2026-03-19 01:51:38,957 [wrapper] pandaids: 7057257787
[2026-03-18 21:51:39] 2026-03-19 01:51:39,056 [wrapper] cleanup supervisor_pilot  203642 3850227
[2026-03-18 21:51:39] 2026-03-19 01:51:39,059 [wrapper] Test setup, not cleaning
[2026-03-18 21:51:39] 2026-03-19 01:51:39,060 [wrapper] apfmon messages muted
[2026-03-18 21:51:39] 2026-03-19 01:51:39,062 [wrapper] ==== wrapper stdout END ====
[2026-03-18 21:51:39] 2026-03-19 01:51:39,064 [wrapper] ==== wrapper stderr END ====
[2026-03-18 21:51:39]  *** Error codes and diagnostics ***
[2026-03-18 21:51:39]     "exeErrorCode": 0,
[2026-03-18 21:51:39]     "exeErrorDiag": "",
[2026-03-18 21:51:39]     "pilotErrorCode": 0,
[2026-03-18 21:51:39]     "pilotErrorDiag": "",
[2026-03-18 21:51:39]  *** Listing of results directory ***
[2026-03-18 21:51:39] total 402504
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas    585013 Mar 18 09:20 pilot3.tar.gz
[2026-03-18 21:51:39] -rwx------. 1 boincer umatlas     36322 Mar 18 09:25 runpilot2-wrapper.sh
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas      5111 Mar 18 09:32 queuedata.json
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas       100 Mar 18 20:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 21:51:39] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 18 20:51 run_atlas
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas       105 Mar 18 20:51 job.xml
[2026-03-18 21:51:39] -rw-r--r--. 2 boincer umatlas 215264207 Mar 18 20:51 EVNT.48967083._001015.pool.root.1
[2026-03-18 21:51:39] -rw-r--r--. 2 boincer umatlas    597519 Mar 18 20:51 input.tar.gz
[2026-03-18 21:51:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 20:51 start_atlas.sh
[2026-03-18 21:51:39] drwxrwx--x. 2 boincer umatlas      4096 Mar 18 20:51 shared
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas         0 Mar 18 20:51 boinc_lockfile
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas      2558 Mar 18 20:51 pandaJob.out
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas        57 Mar 18 20:51 setup.sh.local
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas   1010422 Mar 18 20:51 agis_schedconf.cvmfs.json
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas   1511579 Mar 18 20:51 agis_ddmendpoints.agis.ALL.json
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas       429 Mar 18 20:51 workernode_map.json
[2026-03-18 21:51:39] drwx------. 5 boincer umatlas      4096 Mar 18 20:51 pilot3
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas      7170 Mar 18 21:46 init_data.xml
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas 191268915 Mar 18 21:50 HITS.48967085._025212.pool.root.1
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas        95 Mar 18 21:50 pilot_heartbeat.json
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas       529 Mar 18 21:50 boinc_task_state.xml
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas      1029 Mar 18 21:50 memory_monitor_summary.json
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas    317492 Mar 18 21:50 log.48967085._025212.job.log.tgz.1
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas      6322 Mar 18 21:50 heartbeat.json
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 21:51 boinc_mmap_file
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas        27 Mar 18 21:51 wrapper_checkpoint.txt
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas      5341 Mar 18 21:51 pilotlog.txt
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas    525519 Mar 18 21:51 log.48967085._025212.job.log.1
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas       357 Mar 18 21:51 output.list
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas       620 Mar 18 21:51 runtime_log
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas    860160 Mar 18 21:51 result.tar.gz
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas      9331 Mar 18 21:51 runtime_log.err
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas       650 Mar 18 21:51 RNLMDmu45M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxXzLDmEsLQ1n.diag
[2026-03-18 21:51:39] -rw-r--r--. 1 boincer umatlas     21618 Mar 18 21:51 stderr.txt
[2026-03-18 21:51:39] HITS file was successfully produced:
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas 191268915 Mar 18 21:50 shared/HITS.pool.root.1
[2026-03-18 21:51:39]  *** Contents of shared directory: ***
[2026-03-18 21:51:39] total 398456
[2026-03-18 21:51:39] -rw-r--r--. 2 boincer umatlas 215264207 Mar 18 20:51 ATLAS.root_0
[2026-03-18 21:51:39] -rw-r--r--. 2 boincer umatlas    597519 Mar 18 20:51 input.tar.gz
[2026-03-18 21:51:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 18 20:51 start_atlas.sh
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas 191268915 Mar 18 21:50 HITS.pool.root.1
[2026-03-18 21:51:39] -rw-------. 1 boincer umatlas    860160 Mar 18 21:51 result.tar.gz
21:51:41 (3846360): run_atlas exited; CPU time 25182.613341
21:51:41 (3846360): called boinc_finish(0)

</stderr_txt>
]]>

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