Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:04:46 (768182): wrapper (7.7.26015): starting
01:04:46 (768182): wrapper: running run_atlas (--nthreads 4)
[2026-03-20 01:04:46] Arguments: --nthreads 4
[2026-03-20 01:04:46] Threads: 4
[2026-03-20 01:04:46] Checking for CVMFS
[2026-03-20 01:04:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 01:04:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 01:04:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 01:04:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 01:04:46] 2.9.2.0 301153 4801 96268 157477 0 50 28673788 36864001 0 130560 0 1528982 99.979 171278 8105 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-20 01:04:46] CVMFS is ok
[2026-03-20 01:04:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-20 01:04:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-20 01:04:46] Further information can be found at the LHC@home message board.
[2026-03-20 01:04:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 01:04:46] Checking for apptainer binary...
[2026-03-20 01:04:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 01:04:46] Running /usr/bin/apptainer --version
[2026-03-20 01:04:46] apptainer version 1.4.1-1.1
[2026-03-20 01:04:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 01:04:46] thA315a
[2026-03-20 01:04:46] apptainer works
[2026-03-20 01:04:46] Set ATHENA_PROC_NUMBER=4
[2026-03-20 01:04:46] Set ATHENA_CORE_NUMBER=4
[2026-03-20 01:04:47] Starting ATLAS job with PandaID=7057257641
[2026-03-20 01:04:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 02:32:11]  *** The last 200 lines of the pilot log: ***
[2026-03-20 02:32:11] 2026-03-20 01:31:09,927 | INFO     | process IDs to be killed: [776811] (in reverse order)
[2026-03-20 02:32:11] 2026-03-20 01:31:09,959 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 02:32:11] 2026-03-20 01:31:09,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 02:32:11] 2026-03-20 01:31:09,961 | INFO     | did not find any defunct processes belonging to 776811
[2026-03-20 02:32:11] 2026-03-20 01:31:09,962 | INFO     | did not find any defunct processes belonging to 776811
[2026-03-20 02:32:11] 2026-03-20 01:31:09,962 | INFO     | ready for new job
[2026-03-20 02:32:11] 2026-03-20 01:31:09,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 02:32:11] 2026-03-20 01:31:09,963 | INFO     | **************************************
[2026-03-20 02:32:11] 2026-03-20 01:31:09,963 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 02:32:11] 2026-03-20 01:31:09,963 | INFO     | **************************************
[2026-03-20 02:32:11] 2026-03-20 01:31:09,963 | INFO     | 
[2026-03-20 02:32:11] 2026-03-20 01:31:09,964 | INFO     | architecture information:
[2026-03-20 02:32:11] 2026-03-20 01:31:09,964 | INFO     | executing command: cat /etc/os-release
[2026-03-20 02:32:11] 2026-03-20 01:31:09,977 | INFO     | cat /etc/os-release:
[2026-03-20 02:32:11] NAME="CentOS Linux"
[2026-03-20 02:32:11] VERSION="7 (Core)"
[2026-03-20 02:32:11] ID="centos"
[2026-03-20 02:32:11] ID_LIKE="rhel fedora"
[2026-03-20 02:32:11] VERSION_ID="7"
[2026-03-20 02:32:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 02:32:11] ANSI_COLOR="0;31"
[2026-03-20 02:32:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 02:32:11] HOME_URL="https://www.centos.org/"
[2026-03-20 02:32:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 02:32:11] 
[2026-03-20 02:32:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 02:32:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 02:32:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 02:32:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 02:32:11] 
[2026-03-20 02:32:11] 2026-03-20 01:31:09,978 | INFO     | **************************************
[2026-03-20 02:32:11] 2026-03-20 01:31:10,481 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-20 02:32:11] 2026-03-20 01:31:10,498 | INFO     | sufficient remaining disk space (231140753408 B)
[2026-03-20 02:32:11] 2026-03-20 01:31:10,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | INFO     | update_server=False
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 02:32:11] 2026-03-20 01:31:10,499 | INFO     | aborting loop
[2026-03-20 02:32:11] 2026-03-20 01:31:10,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 02:32:11] 2026-03-20 01:31:10,930 | INFO     | all payload control threads have been joined
[2026-03-20 02:32:11] 2026-03-20 01:31:11,000 | INFO     | all data control threads have been joined
[2026-03-20 02:32:11] 2026-03-20 01:31:11,504 | INFO     | [job] retrieve thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:11,505 | INFO     | [job] queue monitor thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:11,505 | INFO     | [job] job monitor thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:11,588 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:11,719 | INFO     | [data] copytool_in thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:11,811 | INFO     | [payload] validate_post thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:11,936 | INFO     | [payload] control thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:11,986 | INFO     | all job control threads have been joined
[2026-03-20 02:32:11] 2026-03-20 01:31:12,006 | INFO     | [data] control thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:12,015 | INFO     | [payload] failed_post thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:12,505 | INFO     | [data] copytool_out thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:12,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 02:32:11] 2026-03-20 01:31:12,779 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:12,893 | INFO     | [job] validate thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:12,973 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:12,991 | INFO     | [job] control thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:16,620 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:31:20,764 | INFO     | job.realtimelogging is not enabled
[2026-03-20 02:32:11] 2026-03-20 01:31:21,770 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 02:32:11] 2026-03-20 01:32:05,088 | INFO     | [monitor] cgroup control has ended
[2026-03-20 02:32:11] 2026-03-20 01:32:05,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067892856640)>', '<ExcThread(monitor, started 140066584254208)>']
[2026-03-20 02:32:11] 2026-03-20 01:32:06,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 02:32:11] 2026-03-20 01:32:06,794 | INFO     | [monitor] control thread has ended
[2026-03-20 02:32:11] 2026-03-20 01:32:10,830 | INFO     | all workflow threads have been joined
[2026-03-20 02:32:11] 2026-03-20 01:32:10,830 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 02:32:11] 2026-03-20 01:32:10,830 | INFO     | traces error code: 0
[2026-03-20 02:32:11] 2026-03-20 01:32:10,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 02:32:11] 2026-03-20 01:32:10,895 [wrapper] ==== pilot stdout END ====
[2026-03-20 02:32:11] 2026-03-20 01:32:10,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 02:32:11] 2026-03-20 01:32:10,903 [wrapper] pilotpid: 772300
[2026-03-20 02:32:11] 2026-03-20 01:32:10,907 [wrapper] Pilot exit status: 0
[2026-03-20 02:32:11] 2026-03-20 01:32:10,918 [wrapper] pandaids: 7057257641
[2026-03-20 02:32:11] 2026-03-20 01:32:10,940 [wrapper] cleanup supervisor_pilot  782006 772301
[2026-03-20 02:32:11] 2026-03-20 01:32:10,944 [wrapper] Test setup, not cleaning
[2026-03-20 02:32:11] 2026-03-20 01:32:10,948 [wrapper] apfmon messages muted
[2026-03-20 02:32:11] 2026-03-20 01:32:10,951 [wrapper] ==== wrapper stdout END ====
[2026-03-20 02:32:11] 2026-03-20 01:32:10,955 [wrapper] ==== wrapper stderr END ====
[2026-03-20 02:32:11]  *** Error codes and diagnostics ***
[2026-03-20 02:32:11]     "exeErrorCode": 0,
[2026-03-20 02:32:11]     "exeErrorDiag": "",
[2026-03-20 02:32:11]     "pilotErrorCode": 0,
[2026-03-20 02:32:11]     "pilotErrorDiag": "",
[2026-03-20 02:32:11]  *** Listing of results directory ***
[2026-03-20 02:32:11] total 405268
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-20 02:32:11] -rwx------ 1 boinc boinc     36322 Mar 18 14:25 runpilot2-wrapper.sh
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc      5111 Mar 18 14:32 queuedata.json
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc       100 Mar 20 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 02:32:11] -rwxr-xr-x 1 boinc boinc      7986 Mar 20 01:04 run_atlas
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc       105 Mar 20 01:04 job.xml
[2026-03-20 02:32:11] -rw-r--r-- 2 boinc boinc 211086385 Mar 20 01:04 EVNT.48967083._001007.pool.root.1
[2026-03-20 02:32:11] -rw-r--r-- 2 boinc boinc    597523 Mar 20 01:04 input.tar.gz
[2026-03-20 02:32:11] -rw-r--r-- 2 boinc boinc     15845 Mar 20 01:04 start_atlas.sh
[2026-03-20 02:32:11] drwxrwx--x 2 boinc boinc      4096 Mar 20 01:04 shared
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc         0 Mar 20 01:04 boinc_setup_complete
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc      6370 Mar 20 01:04 init_data.xml
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc         0 Mar 20 01:04 boinc_lockfile
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc      2558 Mar 20 01:04 pandaJob.out
[2026-03-20 02:32:11] -rw------- 1 boinc boinc   1010740 Mar 20 01:04 agis_schedconf.cvmfs.json
[2026-03-20 02:32:11] -rw------- 1 boinc boinc   1511579 Mar 20 01:04 agis_ddmendpoints.agis.ALL.json
[2026-03-20 02:32:11] -rw------- 1 boinc boinc       418 Mar 20 01:04 workernode_map.json
[2026-03-20 02:32:11] drwx------ 5 boinc boinc      4096 Mar 20 01:04 pilot3
[2026-03-20 02:32:11] -rw------- 1 boinc boinc        95 Mar 20 02:30 pilot_heartbeat.json
[2026-03-20 02:32:11] -rw------- 1 boinc boinc 197906118 Mar 20 02:30 HITS.48967085._025066.pool.root.1
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc       529 Mar 20 02:30 boinc_task_state.xml
[2026-03-20 02:32:11] -rw------- 1 boinc boinc      1016 Mar 20 02:30 memory_monitor_summary.json
[2026-03-20 02:32:11] -rw------- 1 boinc boinc    281380 Mar 20 02:31 log.48967085._025066.job.log.tgz.1
[2026-03-20 02:32:11] -rw------- 1 boinc boinc      6298 Mar 20 02:31 heartbeat.json
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc        27 Mar 20 02:31 wrapper_checkpoint.txt
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc      8192 Mar 20 02:31 boinc_mmap_file
[2026-03-20 02:32:11] -rw------- 1 boinc boinc      4624 Mar 20 02:32 pilotlog.txt
[2026-03-20 02:32:11] -rw------- 1 boinc boinc    753760 Mar 20 02:32 log.48967085._025066.job.log.1
[2026-03-20 02:32:11] -rw------- 1 boinc boinc       357 Mar 20 02:32 output.list
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc       620 Mar 20 02:32 runtime_log
[2026-03-20 02:32:11] -rw------- 1 boinc boinc   1054720 Mar 20 02:32 result.tar.gz
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc      8901 Mar 20 02:32 runtime_log.err
[2026-03-20 02:32:11] -rw------- 1 boinc boinc       658 Mar 20 02:32 Wb0MDmj45M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJXzLDm21HKpm.diag
[2026-03-20 02:32:11] -rw-r--r-- 1 boinc boinc     10089 Mar 20 02:32 stderr.txt
[2026-03-20 02:32:11] HITS file was successfully produced:
[2026-03-20 02:32:11] -rw------- 1 boinc boinc 197906118 Mar 20 02:30 shared/HITS.pool.root.1
[2026-03-20 02:32:11]  *** Contents of shared directory: ***
[2026-03-20 02:32:11] total 401048
[2026-03-20 02:32:11] -rw-r--r-- 2 boinc boinc 211086385 Mar 20 01:04 ATLAS.root_0
[2026-03-20 02:32:11] -rw-r--r-- 2 boinc boinc    597523 Mar 20 01:04 input.tar.gz
[2026-03-20 02:32:11] -rw-r--r-- 2 boinc boinc     15845 Mar 20 01:04 start_atlas.sh
[2026-03-20 02:32:11] -rw------- 1 boinc boinc 197906118 Mar 20 02:30 HITS.pool.root.1
[2026-03-20 02:32:11] -rw------- 1 boinc boinc   1054720 Mar 20 02:32 result.tar.gz
02:32:13 (768182): run_atlas exited; CPU time 19014.047216
02:32:13 (768182): called boinc_finish(0)

</stderr_txt>
]]>

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