Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:53:19 (11313): wrapper (7.7.26015): starting
19:53:19 (11313): wrapper: running run_atlas (--nthreads 12)
[2026-03-18 19:53:19] Arguments: --nthreads 12
[2026-03-18 19:53:19] Threads: 12
[2026-03-18 19:53:19] Checking for CVMFS
[2026-03-18 19:53:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 19:53:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 19:53:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 19:53:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 19:53:20] 2.11.2.0 2979 449647 101156 157434 0 50 19731122 20275200 1 130560 2 193235497 99.956 24975016 17057 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-18 19:53:20] CVMFS is ok
[2026-03-18 19:53:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 19:53:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 19:53:20] Further information can be found at the LHC@home message board.
[2026-03-18 19:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 19:53:20] Checking for apptainer binary...
[2026-03-18 19:53:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 19:53:20] Running /usr/bin/apptainer --version
[2026-03-18 19:53:20] apptainer version 1.3.2-1.el7
[2026-03-18 19:53:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 19:53:21] c-205-7.aglt2.org
[2026-03-18 19:53:21] apptainer works
[2026-03-18 19:53:21] Set ATHENA_PROC_NUMBER=12
[2026-03-18 19:53:21] Set ATHENA_CORE_NUMBER=12
[2026-03-18 19:53:21] Starting ATLAS job with PandaID=7057257746
[2026-03-18 19:53:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 21:21:17]  *** The last 200 lines of the pilot log: ***
[2026-03-18 21:21:17]  filesize=380146
[2026-03-18 21:21:17]  filetype=log
[2026-03-18 21:21:17]  guid=fa54c8f6-23d3-466f-8ac4-f6db1128be1c
[2026-03-18 21:21:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-18 21:21:17]  is_altstaged=None
[2026-03-18 21:21:17]  is_tar=False
[2026-03-18 21:21:17]  lfn=log.48967085._025171.job.log.tgz.1
[2026-03-18 21:21:17]  mtime=0
[2026-03-18 21:21:17]  protocol_id=None
[2026-03-18 21:21:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-18 21:21:17]  replicas=None
[2026-03-18 21:21:17]  scope=mc23_13p6TeV
[2026-03-18 21:21:17]  status=None
[2026-03-18 21:21:17]  status_code=0
[2026-03-18 21:21:17]  storage_token=
[2026-03-18 21:21:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7057257746/log.48967085._025171.job.log.tgz.1
[2026-03-18 21:21:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/7f/log.48967085._025171.job.log.tgz.1
[2026-03-18 21:21:17]  workdir=None
[2026-03-18 21:21:17] ]
[2026-03-18 21:21:17] 2026-03-19 01:20:41,765 | INFO     | transferring file log.48967085._025171.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7057257746/log.48967085._025171.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-18 21:21:17] 2026-03-19 01:20:41,765 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7057257746/log.48967085._025171.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._025171.job
[2026-03-18 21:21:17] 2026-03-19 01:20:41,788 | INFO     | adding to output.list: log.48967085._025171.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/7f/log.48967085._025171.job.log.tg
[2026-03-18 21:21:17] 2026-03-19 01:20:41,789 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-18 21:21:17] 2026-03-19 01:20:41,789 | INFO     | summary of transferred files:
[2026-03-18 21:21:17] 2026-03-19 01:20:41,789 | INFO     |  -- lfn=log.48967085._025171.job.log.tgz.1, status_code=0, status=transferred
[2026-03-18 21:21:17] 2026-03-19 01:20:41,790 | INFO     | stage-out finished correctly
[2026-03-18 21:21:17] 2026-03-19 01:20:42,826 | INFO     | PID=14993 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 21:21:17] 2026-03-19 01:20:43,552 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 21:21:17] 2026-03-19 01:20:43,826 | INFO     | time since job start (5220s) is within the limit (345600.0s)
[2026-03-18 21:21:17] 2026-03-19 01:20:43,981 | INFO     | monitor loop #398: job 0:7057257746 is in state 'finished'
[2026-03-18 21:21:17] 2026-03-19 01:20:43,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,040 | INFO     | job 7057257746 has state=finished
[2026-03-18 21:21:17] 2026-03-19 01:20:44,040 | INFO     | preparing for final server update for job 7057257746 in state='finished'
[2026-03-18 21:21:17] 2026-03-19 01:20:44,041 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7057257746/jobReport.json
[2026-03-18 21:21:17] 2026-03-19 01:20:44,044 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-18 21:21:17] 2026-03-19 01:20:44,045 | INFO     | this job has now completed (state=finished)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,045 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,045 | INFO     | log transfer has been attempted: DONE
[2026-03-18 21:21:17] 2026-03-19 01:20:44,045 | INFO     | job 7057257746 has finished - writing final server update
[2026-03-18 21:21:17] 2026-03-19 01:20:44,046 | INFO     | total number of processed events: 400 (read)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,047 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057257746/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,048 | INFO     | extracted standard info from prmon json
[2026-03-18 21:21:17] 2026-03-19 01:20:44,048 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 21:21:17] 2026-03-19 01:20:44,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 21:21:17] 2026-03-19 01:20:44,048 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 21:21:17] 2026-03-19 01:20:44,048 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 21:21:17] 2026-03-19 01:20:44,050 | INFO     | fitting pss+swap vs Time
[2026-03-18 21:21:17] 2026-03-19 01:20:44,050 | INFO     | sum of square deviations: 147126479.5
[2026-03-18 21:21:17] 2026-03-19 01:20:44,051 | INFO     | sum of deviations: -5772782000.499998
[2026-03-18 21:21:17] 2026-03-19 01:20:44,051 | INFO     | mean x: 1773880707.5
[2026-03-18 21:21:17] 2026-03-19 01:20:44,051 | INFO     | mean y: 2711275.217948718
[2026-03-18 21:21:17] 2026-03-19 01:20:44,051 | INFO     | intersect: 69604231369.29591
[2026-03-18 21:21:17] 2026-03-19 01:20:44,051 | INFO     | chi2: 0.10717029138312446
[2026-03-18 21:21:17] 2026-03-19 01:20:44,051 | INFO     | current memory leak: -39.24 B/s (using 78 data points, chi2=0.11)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | ..............................
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | . Timing measurements:
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | . get job = 0 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | . initial setup = 7 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | . payload setup = 13 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | . stage-in = 0 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,052 | INFO     | . payload execution = 5188 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,053 | INFO     | . stage-out = 0 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,053 | INFO     | . log creation = 0 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,053 | INFO     | ..............................
[2026-03-18 21:21:17] 2026-03-19 01:20:44,129 | INFO     | 
[2026-03-18 21:21:17] 2026-03-19 01:20:44,130 | INFO     | job summary report
[2026-03-18 21:21:17] 2026-03-19 01:20:44,130 | INFO     | --------------------------------------------------
[2026-03-18 21:21:17] 2026-03-19 01:20:44,130 | INFO     | PanDA job id: 7057257746
[2026-03-18 21:21:17] 2026-03-19 01:20:44,130 | INFO     | task id: 48967085
[2026-03-18 21:21:17] 2026-03-19 01:20:44,130 | INFO     | errors: (none)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,130 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 21:21:17] 2026-03-19 01:20:44,130 | INFO     | pilot state: finished 
[2026-03-18 21:21:17] 2026-03-19 01:20:44,131 | INFO     | transexitcode: 0
[2026-03-18 21:21:17] 2026-03-19 01:20:44,131 | INFO     | exeerrorcode: 0
[2026-03-18 21:21:17] 2026-03-19 01:20:44,131 | INFO     | exeerrordiag: 
[2026-03-18 21:21:17] 2026-03-19 01:20:44,131 | INFO     | exitcode: 0
[2026-03-18 21:21:17] 2026-03-19 01:20:44,131 | INFO     | exitmsg: OK
[2026-03-18 21:21:17] 2026-03-19 01:20:44,131 | INFO     | cpuconsumptiontime: 56613 s
[2026-03-18 21:21:17] 2026-03-19 01:20:44,132 | INFO     | nevents: 400
[2026-03-18 21:21:17] 2026-03-19 01:20:44,132 | INFO     | neventsw: 0
[2026-03-18 21:21:17] 2026-03-19 01:20:44,132 | INFO     | pid: 19499
[2026-03-18 21:21:17] 2026-03-19 01:20:44,132 | INFO     | pgrp: 19499
[2026-03-18 21:21:17] 2026-03-19 01:20:44,132 | INFO     | corecount: 12
[2026-03-18 21:21:17] 2026-03-19 01:20:44,132 | INFO     | event service: False
[2026-03-18 21:21:17] 2026-03-19 01:20:44,132 | INFO     | sizes: {0: 2280129, 11: 2280129, 5205: 2306566, 5206: 2306565, 5207: 2315619, 5209: 2315997}
[2026-03-18 21:21:17] 2026-03-19 01:20:44,133 | INFO     | --------------------------------------------------
[2026-03-18 21:21:17] 2026-03-19 01:20:44,133 | INFO     | 
[2026-03-18 21:21:17] 2026-03-19 01:20:44,133 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-18 21:21:17] 2026-03-19 01:20:44,158 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,159 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,159 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,159 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,162 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,162 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 21:21:17] 2026-03-19 01:20:44,162 | INFO     | job 7057257746 has completed (purged errors)
[2026-03-18 21:21:17] 2026-03-19 01:20:44,162 | INFO     | overall cleanup function is called
[2026-03-18 21:21:17] 2026-03-19 01:20:45,171 | INFO     | --- collectZombieJob: --- 10, [19499]
[2026-03-18 21:21:17] 2026-03-19 01:20:45,171 | INFO     | zombie collector waiting for pid 19499
[2026-03-18 21:21:17] 2026-03-19 01:20:45,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 21:21:17] 2026-03-19 01:20:45,171 | INFO     | collected zombie processes
[2026-03-18 21:21:17] 2026-03-19 01:20:45,171 | INFO     | will attempt to kill all subprocesses of pid=19499
[2026-03-18 21:21:17] 2026-03-19 01:20:45,263 | INFO     | process IDs to be killed: [19499] (in reverse order)
[2026-03-18 21:21:17] 2026-03-19 01:20:45,318 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 21:21:17] 2026-03-19 01:20:45,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 21:21:17] 2026-03-19 01:20:45,322 | INFO     | did not find any defunct processes belonging to 19499
[2026-03-18 21:21:17] 2026-03-19 01:20:45,326 | INFO     | did not find any defunct processes belonging to 19499
[2026-03-18 21:21:17] 2026-03-19 01:20:45,326 | INFO     | ready for new job
[2026-03-18 21:21:17] 2026-03-19 01:20:45,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 21:21:17] 2026-03-19 01:20:45,327 | INFO     | **************************************
[2026-03-18 21:21:17] 2026-03-19 01:20:45,328 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 21:21:17] 2026-03-19 01:20:45,328 | INFO     | **************************************
[2026-03-18 21:21:17] 2026-03-19 01:20:45,328 | INFO     | 
[2026-03-18 21:21:17] 2026-03-19 01:20:45,328 | INFO     | architecture information:
[2026-03-18 21:21:17] 2026-03-19 01:20:45,329 | INFO     | executing command: cat /etc/os-release
[2026-03-18 21:21:17] 2026-03-19 01:20:45,344 | INFO     | cat /etc/os-release:
[2026-03-18 21:21:17] NAME="CentOS Linux"
[2026-03-18 21:21:17] VERSION="7 (Core)"
[2026-03-18 21:21:17] ID="centos"
[2026-03-18 21:21:17] ID_LIKE="rhel fedora"
[2026-03-18 21:21:17] VERSION_ID="7"
[2026-03-18 21:21:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 21:21:17] ANSI_COLOR="0;31"
[2026-03-18 21:21:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 21:21:17] HOME_URL="https://www.centos.org/"
[2026-03-18 21:21:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 21:21:17] 
[2026-03-18 21:21:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 21:21:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 21:21:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 21:21:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 21:21:17] 
[2026-03-18 21:21:17] 2026-03-19 01:20:45,344 | INFO     | **************************************
[2026-03-18 21:21:17] 2026-03-19 01:20:45,847 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 21:21:17] 2026-03-19 01:20:45,863 | INFO     | sufficient remaining disk space (29345447936 B)
[2026-03-18 21:21:17] 2026-03-19 01:20:45,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 21:21:17] 2026-03-19 01:20:45,864 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 21:21:17] 2026-03-19 01:20:45,864 | INFO     | update_server=False
[2026-03-18 21:21:17] 2026-03-19 01:20:45,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 21:21:17] 2026-03-19 01:20:45,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 21:21:17] 2026-03-19 01:20:45,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:21:17] 2026-03-19 01:20:45,865 | INFO     | aborting loop
[2026-03-18 21:21:17] 2026-03-19 01:20:45,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:21:17] 2026-03-19 01:20:45,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 21:21:17] 2026-03-19 01:20:45,943 | INFO     | all payload control threads have been joined
[2026-03-18 21:21:17] 2026-03-19 01:20:46,442 | INFO     | all data control threads have been joined
[2026-03-18 21:21:17] 2026-03-19 01:20:46,697 | INFO     | all job control threads have been joined
[2026-03-18 21:21:17] 2026-03-19 01:20:46,866 | INFO     | [job] job monitor thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:46,868 | INFO     | [job] queue monitor thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:46,869 | INFO     | [job] retrieve thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:46,948 | INFO     | [payload] control thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,417 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,448 | INFO     | [data] control thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,460 | INFO     | [job] validate thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,660 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,702 | INFO     | [job] control thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,870 | INFO     | [data] copytool_out thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,901 | INFO     | [payload] validate_post thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:47,997 | INFO     | [payload] failed_post thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:48,024 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:48,027 | INFO     | [data] copytool_in thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:49,872 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:51,039 | INFO     | [monitor] cgroup control has ended
[2026-03-18 21:21:17] 2026-03-19 01:20:56,189 | INFO     | job.realtimelogging is not enabled
[2026-03-18 21:21:17] 2026-03-19 01:20:57,194 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 21:21:17] 2026-03-19 01:20:59,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538430482240)>', '<ExcThread(monitor, started 140537621370624)>']
[2026-03-18 21:21:17] 2026-03-19 01:21:04,169 | INFO     | all workflow threads have been joined
[2026-03-18 21:21:17] 2026-03-19 01:21:04,170 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 21:21:17] 2026-03-19 01:21:04,170 | INFO     | traces error code: 0
[2026-03-18 21:21:17] 2026-03-19 01:21:04,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 21:21:17] 2026-03-19 01:21:17,031 | INFO     | PID=14993 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 21:21:17] 2026-03-19 01:21:17,034 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 21:21:17] 2026-03-19 01:21:17,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 21:21:17] 2026-03-19 01:21:17,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 21:21:17] 2026-03-19 01:21:17,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 21:21:17] 2026-03-19 01:21:17,035 | INFO     | [monitor] control thread has ended
[2026-03-18 21:21:17] 2026-03-19 01:21:17,129 [wrapper] ==== pilot stdout END ====
[2026-03-18 21:21:17] 2026-03-19 01:21:17,133 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 21:21:17] 2026-03-19 01:21:17,141 [wrapper] pilotpid: 14993
[2026-03-18 21:21:17] 2026-03-19 01:21:17,145 [wrapper] Pilot exit status: 0
[2026-03-18 21:21:17] 2026-03-19 01:21:17,161 [wrapper] pandaids: 7057257746
[2026-03-18 21:21:17] 2026-03-19 01:21:17,198 [wrapper] cleanup supervisor_pilot  9239 14994
[2026-03-18 21:21:17] 2026-03-19 01:21:17,202 [wrapper] Test setup, not cleaning
[2026-03-18 21:21:17] 2026-03-19 01:21:17,206 [wrapper] apfmon messages muted
[2026-03-18 21:21:17] 2026-03-19 01:21:17,210 [wrapper] ==== wrapper stdout END ====
[2026-03-18 21:21:17] 2026-03-19 01:21:17,214 [wrapper] ==== wrapper stderr END ====
[2026-03-18 21:21:17]  *** Error codes and diagnostics ***
[2026-03-18 21:21:17]     "exeErrorCode": 0,
[2026-03-18 21:21:17]     "exeErrorDiag": "",
[2026-03-18 21:21:17]     "pilotErrorCode": 0,
[2026-03-18 21:21:17]     "pilotErrorDiag": "",
[2026-03-18 21:21:17]  *** Listing of results directory ***
[2026-03-18 21:21:17] total 403908
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas    585013 Mar 18 09:20 pilot3.tar.gz
[2026-03-18 21:21:17] -rwx------ 1 boincer umatlas     36322 Mar 18 09:25 runpilot2-wrapper.sh
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas      5111 Mar 18 09:32 queuedata.json
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas       100 Mar 18 19:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 21:21:17] -rwxr-xr-x 1 boincer umatlas      7986 Mar 18 19:53 run_atlas
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas       105 Mar 18 19:53 job.xml
[2026-03-18 21:21:17] -rw-r--r-- 2 boincer umatlas 212706672 Mar 18 19:53 EVNT.48967083._001014.pool.root.1
[2026-03-18 21:21:17] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 19:53 start_atlas.sh
[2026-03-18 21:21:17] drwxrwx--x 2 boincer umatlas      4096 Mar 18 19:53 shared
[2026-03-18 21:21:17] -rw-r--r-- 2 boincer umatlas    597516 Mar 18 19:53 input.tar.gz
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas         0 Mar 18 19:53 boinc_lockfile
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas      2557 Mar 18 19:53 pandaJob.out
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas        57 Mar 18 19:53 setup.sh.local
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas   1010350 Mar 18 19:53 agis_schedconf.cvmfs.json
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas   1511579 Mar 18 19:53 agis_ddmendpoints.agis.ALL.json
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas       444 Mar 18 19:53 workernode_map.json
[2026-03-18 21:21:17] drwx------ 5 boincer umatlas      4096 Mar 18 19:53 pilot3
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas      5952 Mar 18 21:11 init_data.xml
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas 194699817 Mar 18 21:20 HITS.48967085._025171.pool.root.1
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas       529 Mar 18 21:20 boinc_task_state.xml
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas      1045 Mar 18 21:20 memory_monitor_summary.json
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas    380146 Mar 18 21:20 log.48967085._025171.job.log.tgz.1
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas      6422 Mar 18 21:20 heartbeat.json
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas      8192 Mar 18 21:20 boinc_mmap_file
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas        27 Mar 18 21:20 wrapper_checkpoint.txt
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas        95 Mar 18 21:21 pilot_heartbeat.json
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas       745 Mar 18 21:21 pilotlog.txt
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas    751159 Mar 18 21:21 log.48967085._025171.job.log.1
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas       357 Mar 18 21:21 output.list
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas       620 Mar 18 21:21 runtime_log
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas   1146880 Mar 18 21:21 result.tar.gz
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas      9338 Mar 18 21:21 runtime_log.err
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas       658 Mar 18 21:21 GODNDmt45M9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfS2LDmRKcbin.diag
[2026-03-18 21:21:17] -rw-r--r-- 1 boincer umatlas     21290 Mar 18 21:21 stderr.txt
[2026-03-18 21:21:17] HITS file was successfully produced:
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas 194699817 Mar 18 21:20 shared/HITS.pool.root.1
[2026-03-18 21:21:17]  *** Contents of shared directory: ***
[2026-03-18 21:21:17] total 399584
[2026-03-18 21:21:17] -rw-r--r-- 2 boincer umatlas 212706672 Mar 18 19:53 ATLAS.root_0
[2026-03-18 21:21:17] -rw-r--r-- 2 boincer umatlas     15845 Mar 18 19:53 start_atlas.sh
[2026-03-18 21:21:17] -rw-r--r-- 2 boincer umatlas    597516 Mar 18 19:53 input.tar.gz
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas 194699817 Mar 18 21:20 HITS.pool.root.1
[2026-03-18 21:21:17] -rw------- 1 boincer umatlas   1146880 Mar 18 21:21 result.tar.gz
21:21:18 (11313): run_atlas exited; CPU time 56595.289367
21:21:18 (11313): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN