Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:44 (763): wrapper (7.7.26015): starting
19:36:44 (763): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 19:36:44] Arguments: --nthreads 8
[2026-03-19 19:36:44] Threads: 8
[2026-03-19 19:36:44] Checking for CVMFS
[2026-03-19 19:36:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 19:36:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 19:36:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 19:36:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 19:36:48] 2.11.2.0 3545 135141 137308 157465 3 156 20861074 25165824 4466 130560 155 46631707 99.828 36209676 1170 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-19 19:36:48] CVMFS is ok
[2026-03-19 19:36:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 19:36:48] Checking for apptainer binary...
[2026-03-19 19:36:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 19:36:48] Running /usr/bin/apptainer --version
[2026-03-19 19:36:48] apptainer version 1.3.2-1.el7
[2026-03-19 19:36:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 19:36:53] cg-vwn466.simple-grid.lan
[2026-03-19 19:36:53] apptainer works
[2026-03-19 19:36:53] Set ATHENA_PROC_NUMBER=8
[2026-03-19 19:36:53] Set ATHENA_CORE_NUMBER=8
[2026-03-19 19:36:53] Starting ATLAS job with PandaID=7057115628
[2026-03-19 19:36:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 00:06:06]  *** The last 200 lines of the pilot log: ***
[2026-03-20 00:06:06] 2026-03-19 23:05:03,705 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7057115628/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,706 | INFO     | extracted standard info from prmon json
[2026-03-20 00:06:06] 2026-03-19 23:05:03,706 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 00:06:06] 2026-03-19 23:05:03,706 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 00:06:06] 2026-03-19 23:05:03,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 00:06:06] 2026-03-19 23:05:03,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 00:06:06] 2026-03-19 23:05:03,711 | INFO     | fitting pss+swap vs Time
[2026-03-20 00:06:06] 2026-03-19 23:05:03,711 | INFO     | sum of square deviations: 5021496942.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,713 | INFO     | sum of deviations: 98735289666.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,713 | INFO     | mean x: 1773953751.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,714 | INFO     | mean y: 2433659.671936759
[2026-03-20 00:06:06] 2026-03-19 23:05:03,714 | INFO     | intersect: -34877969431.704124
[2026-03-20 00:06:06] 2026-03-19 23:05:03,714 | INFO     | chi2: 5.115428691699321
[2026-03-20 00:06:06] 2026-03-19 23:05:03,714 | INFO     | sum of square deviations: 4729621702.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,716 | INFO     | sum of deviations: 113139429658.5
[2026-03-20 00:06:06] 2026-03-19 23:05:03,717 | INFO     | mean x: 1773953598.5
[2026-03-20 00:06:06] 2026-03-19 23:05:03,717 | INFO     | mean y: 2441044.9879032257
[2026-03-20 00:06:06] 2026-03-19 23:05:03,717 | INFO     | intersect: -42433108988.55127
[2026-03-20 00:06:06] 2026-03-19 23:05:03,717 | INFO     | chi2: 4.369657630323572
[2026-03-20 00:06:06] 2026-03-19 23:05:03,717 | INFO     | current chi2=4.369657630323572 (change=14.578857537118886 %)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,717 | INFO     | right removable region: 247
[2026-03-20 00:06:06] 2026-03-19 23:05:03,718 | INFO     | sum of square deviations: 4729621702.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,720 | INFO     | sum of deviations: 18975035760.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,720 | INFO     | mean x: 1773953903.5
[2026-03-20 00:06:06] 2026-03-19 23:05:03,720 | INFO     | mean y: 2475255.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,720 | INFO     | intersect: -7114550350.085929
[2026-03-20 00:06:06] 2026-03-19 23:05:03,724 | INFO     | chi2: 1.1904632638633983
[2026-03-20 00:06:06] 2026-03-19 23:05:03,725 | INFO     | current chi2=1.1904632638633983 (change=76.7279863407121 %)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,725 | INFO     | sum of square deviations: 4449281562.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,727 | INFO     | sum of deviations: -2105510404.0000038
[2026-03-20 00:06:06] 2026-03-19 23:05:03,727 | INFO     | mean x: 1773954056.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,727 | INFO     | mean y: 2486638.0658436213
[2026-03-20 00:06:06] 2026-03-19 23:05:03,728 | INFO     | intersect: 841965702.0626493
[2026-03-20 00:06:06] 2026-03-19 23:05:03,728 | INFO     | chi2: 0.8237338705439068
[2026-03-20 00:06:06] 2026-03-19 23:05:03,728 | INFO     | current chi2=0.8237338705439068 (change=30.805603537008636 %)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,729 | INFO     | sum of square deviations: 4180243959.5
[2026-03-20 00:06:06] 2026-03-19 23:05:03,730 | INFO     | sum of deviations: -6085083182.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,731 | INFO     | mean x: 1773954208.5
[2026-03-20 00:06:06] 2026-03-19 23:05:03,731 | INFO     | mean y: 2488865.705882353
[2026-03-20 00:06:06] 2026-03-19 23:05:03,731 | INFO     | intersect: 2584792440.4170156
[2026-03-20 00:06:06] 2026-03-19 23:05:03,731 | INFO     | chi2: 0.8019788217442054
[2026-03-20 00:06:06] 2026-03-19 23:05:03,731 | INFO     | current chi2=0.8019788217442054 (change=2.6410288052543747 %)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,732 | INFO     | left removable region: 30
[2026-03-20 00:06:06] 2026-03-19 23:05:03,732 | INFO     | sum of square deviations: 3168461268.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,733 | INFO     | sum of deviations: 8962120975.999998
[2026-03-20 00:06:06] 2026-03-19 23:05:03,734 | INFO     | mean x: 1773954483.0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,734 | INFO     | mean y: 2498252.5529953917
[2026-03-20 00:06:06] 2026-03-19 23:05:03,734 | INFO     | intersect: -5015203823.571462
[2026-03-20 00:06:06] 2026-03-19 23:05:03,734 | INFO     | chi2: 0.00088360408200103
[2026-03-20 00:06:06] 2026-03-19 23:05:03,734 | INFO     | current memory leak: 2.83 B/s (using 217 data points, chi2=0.00)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | ..............................
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | . Timing measurements:
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | . get job = 0 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | . initial setup = 103 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | . payload setup = 198 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | . stage-in = 0 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | . payload execution = 15541 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,735 | INFO     | . stage-out = 3 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,736 | INFO     | . log creation = 1 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,736 | INFO     | ..............................
[2026-03-20 00:06:06] 2026-03-19 23:05:03,876 | INFO     | 
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | job summary report
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | --------------------------------------------------
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | PanDA job id: 7057115628
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | task id: 48967085
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | errors: (none)
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | pilot state: finished 
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | transexitcode: 0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,877 | INFO     | exeerrorcode: 0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | exeerrordiag: 
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | exitcode: 0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | exitmsg: OK
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | cpuconsumptiontime: 59961 s
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | nevents: 400
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | neventsw: 0
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | pid: 9430
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | pgrp: 9430
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | corecount: 8
[2026-03-20 00:06:06] 2026-03-19 23:05:03,878 | INFO     | event service: False
[2026-03-20 00:06:06] 2026-03-19 23:05:03,879 | INFO     | sizes: {0: 2279090, 1: 2280091, 2: 2280179, 15744: 2311375, 15749: 2320373, 15751: 2320457, 15752: 2320779}
[2026-03-20 00:06:06] 2026-03-19 23:05:03,879 | INFO     | --------------------------------------------------
[2026-03-20 00:06:06] 2026-03-19 23:05:03,879 | INFO     | 
[2026-03-20 00:06:06] 2026-03-19 23:05:03,879 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-20 00:06:06] 2026-03-19 23:05:04,241 | INFO     | time since job start (15754s) is within the limit (345600.0s)
[2026-03-20 00:06:06] 2026-03-19 23:05:04,261 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,261 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,261 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,261 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,263 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 00:06:06] 2026-03-19 23:05:04,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,263 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 00:06:06] 2026-03-19 23:05:04,263 | INFO     | job 7057115628 has completed (purged errors)
[2026-03-20 00:06:06] 2026-03-19 23:05:04,263 | INFO     | overall cleanup function is called
[2026-03-20 00:06:06] 2026-03-19 23:05:05,272 | INFO     | --- collectZombieJob: --- 10, [9430]
[2026-03-20 00:06:06] 2026-03-19 23:05:05,273 | INFO     | zombie collector waiting for pid 9430
[2026-03-20 00:06:06] 2026-03-19 23:05:05,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 00:06:06] 2026-03-19 23:05:05,273 | INFO     | collected zombie processes
[2026-03-20 00:06:06] 2026-03-19 23:05:05,273 | INFO     | will attempt to kill all subprocesses of pid=9430
[2026-03-20 00:06:06] 2026-03-19 23:05:05,393 | INFO     | process IDs to be killed: [9430] (in reverse order)
[2026-03-20 00:06:06] 2026-03-19 23:05:06,374 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 00:06:06] 2026-03-19 23:05:06,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 00:06:06] 2026-03-19 23:05:06,377 | INFO     | did not find any defunct processes belonging to 9430
[2026-03-20 00:06:06] 2026-03-19 23:05:06,380 | INFO     | did not find any defunct processes belonging to 9430
[2026-03-20 00:06:06] 2026-03-19 23:05:06,380 | INFO     | ready for new job
[2026-03-20 00:06:06] 2026-03-19 23:05:06,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 00:06:06] 2026-03-19 23:05:06,382 | INFO     | **************************************
[2026-03-20 00:06:06] 2026-03-19 23:05:06,382 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 00:06:06] 2026-03-19 23:05:06,383 | INFO     | **************************************
[2026-03-20 00:06:06] 2026-03-19 23:05:06,383 | INFO     | 
[2026-03-20 00:06:06] 2026-03-19 23:05:06,383 | INFO     | pilot is running in a VM
[2026-03-20 00:06:06] 2026-03-19 23:05:06,383 | INFO     | architecture information:
[2026-03-20 00:06:06] 2026-03-19 23:05:06,392 | INFO     | executing command: cat /etc/os-release
[2026-03-20 00:06:06] 2026-03-19 23:05:06,712 | INFO     | cat /etc/os-release:
[2026-03-20 00:06:06] NAME="CentOS Linux"
[2026-03-20 00:06:06] VERSION="7 (Core)"
[2026-03-20 00:06:06] ID="centos"
[2026-03-20 00:06:06] ID_LIKE="rhel fedora"
[2026-03-20 00:06:06] VERSION_ID="7"
[2026-03-20 00:06:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 00:06:06] ANSI_COLOR="0;31"
[2026-03-20 00:06:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 00:06:06] HOME_URL="https://www.centos.org/"
[2026-03-20 00:06:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 00:06:06] 
[2026-03-20 00:06:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 00:06:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 00:06:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 00:06:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 00:06:06] 
[2026-03-20 00:06:06] 2026-03-19 23:05:06,712 | INFO     | **************************************
[2026-03-20 00:06:06] 2026-03-19 23:05:07,215 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-20 00:06:06] 2026-03-19 23:05:07,507 | INFO     | sufficient remaining disk space (495552823296 B)
[2026-03-20 00:06:06] 2026-03-19 23:05:07,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 00:06:06] 2026-03-19 23:05:07,508 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 00:06:06] 2026-03-19 23:05:07,508 | INFO     | update_server=False
[2026-03-20 00:06:06] 2026-03-19 23:05:07,508 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 00:06:06] 2026-03-19 23:05:07,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 00:06:06] 2026-03-19 23:05:07,613 | INFO     | all data control threads have been joined
[2026-03-20 00:06:06] 2026-03-19 23:05:07,639 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-20 00:06:06] 2026-03-19 23:05:07,640 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-20 00:06:06] 2026-03-19 23:05:07,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 00:06:06] 2026-03-19 23:05:07,640 | INFO     | will abort loop
[2026-03-20 00:06:06] 2026-03-19 23:05:08,513 | INFO     | [job] retrieve thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:08,619 | INFO     | [data] control thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:08,623 | INFO     | all payload control threads have been joined
[2026-03-20 00:06:06] 2026-03-19 23:05:08,645 | INFO     | [job] job monitor thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:08,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:08,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 00:06:06] 2026-03-19 23:05:09,095 | INFO     | [payload] validate_post thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,145 | INFO     | all job control threads have been joined
[2026-03-20 00:06:06] 2026-03-19 23:05:09,178 | INFO     | [data] copytool_in thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,321 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,477 | INFO     | [payload] failed_post thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,515 | INFO     | [data] copytool_out thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,571 | INFO     | [job] validate thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,629 | INFO     | [payload] control thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 00:06:06] 2026-03-19 23:05:09,722 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,896 | INFO     | [job] queue monitor thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:09,962 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:10,151 | INFO     | [job] control thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:13,715 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 00:06:06] 2026-03-19 23:05:37,433 | INFO     | PID=4923 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-20 00:06:06] 2026-03-19 23:05:37,434 | INFO     | .. there are 9 such processes running
[2026-03-20 00:06:06] 2026-03-19 23:05:37,434 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 00:06:06] 2026-03-19 23:05:37,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 00:06:06] 2026-03-19 23:05:37,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 00:06:06] 2026-03-19 23:05:56,372 | INFO     | [monitor] cgroup control has ended
[2026-03-20 00:06:06] 2026-03-19 23:05:57,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764664919872)>', '<ExcThread(monitor, started 139764367861504)>']
[2026-03-20 00:06:06] 2026-03-19 23:05:57,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 00:06:06] 2026-03-19 23:05:57,549 | INFO     | [monitor] control thread has ended
[2026-03-20 00:06:06] 2026-03-19 23:06:02,030 | INFO     | all workflow threads have been joined
[2026-03-20 00:06:06] 2026-03-19 23:06:02,031 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 00:06:06] 2026-03-19 23:06:02,031 | INFO     | traces error code: 0
[2026-03-20 00:06:06] 2026-03-19 23:06:02,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 00:06:06] 2026-03-19 23:06:02,355 [wrapper] ==== pilot stdout END ====
[2026-03-20 00:06:06] 2026-03-19 23:06:02,396 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 00:06:06] 2026-03-19 23:06:02,480 [wrapper] pilotpid: 4923
[2026-03-20 00:06:06] 2026-03-19 23:06:02,556 [wrapper] Pilot exit status: 0
[2026-03-20 00:06:06] 2026-03-19 23:06:02,903 [wrapper] pandaids: 7057115628
[2026-03-20 00:06:06] 2026-03-19 23:06:03,749 [wrapper] cleanup supervisor_pilot 17105 4924
[2026-03-20 00:06:06] 2026-03-19 23:06:03,814 [wrapper] Test setup, not cleaning
[2026-03-20 00:06:06] 2026-03-19 23:06:03,849 [wrapper] apfmon messages muted
[2026-03-20 00:06:06] 2026-03-19 23:06:03,944 [wrapper] ==== wrapper stdout END ====
[2026-03-20 00:06:06] 2026-03-19 23:06:04,040 [wrapper] ==== wrapper stderr END ====
[2026-03-20 00:06:06]  *** Error codes and diagnostics ***
[2026-03-20 00:06:06]     "exeErrorCode": 0,
[2026-03-20 00:06:06]     "exeErrorDiag": "",
[2026-03-20 00:06:06]     "pilotErrorCode": 0,
[2026-03-20 00:06:06]     "pilotErrorDiag": "",
[2026-03-20 00:06:06]  *** Listing of results directory ***
[2026-03-20 00:06:06] total 408940
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-20 00:06:06] -rwx------. 1 boinc boinc     36322 Mar 18 14:24 runpilot2-wrapper.sh
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc      5111 Mar 18 14:30 queuedata.json
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc       100 Mar 19 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 00:06:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 19:36 run_atlas
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc       105 Mar 19 19:36 job.xml
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc      6392 Mar 19 19:36 init_data.xml
[2026-03-20 00:06:06] -rw-r--r--. 2 boinc boinc 213346934 Mar 19 19:36 EVNT.48967083._000988.pool.root.1
[2026-03-20 00:06:06] -rw-r--r--. 2 boinc boinc     15845 Mar 19 19:36 start_atlas.sh
[2026-03-20 00:06:06] drwxrwx--x. 2 boinc boinc        68 Mar 19 19:36 shared
[2026-03-20 00:06:06] -rw-r--r--. 2 boinc boinc    597522 Mar 19 19:36 input.tar.gz
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc         0 Mar 19 19:36 boinc_lockfile
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc      2550 Mar 19 19:36 pandaJob.out
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc       413 Mar 19 19:42 workernode_map.json
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc   1010708 Mar 19 19:42 agis_schedconf.cvmfs.json
[2026-03-20 00:06:06] drwx------. 5 boinc boinc      4096 Mar 19 19:42 pilot3
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc 196105186 Mar 20 00:03 HITS.48967085._024654.pool.root.1
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc       531 Mar 20 00:04 boinc_task_state.xml
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc        95 Mar 20 00:04 pilot_heartbeat.json
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc      1027 Mar 20 00:04 memory_monitor_summary.json
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc   1511579 Mar 20 00:04 agis_ddmendpoints.agis.ALL.json
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc    481655 Mar 20 00:05 log.48967085._024654.job.log.tgz.1
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc      6313 Mar 20 00:05 heartbeat.json
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc      8192 Mar 20 00:05 boinc_mmap_file
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc        28 Mar 20 00:05 wrapper_checkpoint.txt
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc      5065 Mar 20 00:06 pilotlog.txt
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc   2208232 Mar 20 00:06 log.48967085._024654.job.log.1
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc       357 Mar 20 00:06 output.list
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc       620 Mar 20 00:06 runtime_log
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc   2703360 Mar 20 00:06 result.tar.gz
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc      8816 Mar 20 00:06 runtime_log.err
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc       656 Mar 20 00:06 musKDmN45M9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBUzLDm2QfzEn.diag
[2026-03-20 00:06:06] -rw-r--r--. 1 boinc boinc     20700 Mar 20 00:06 stderr.txt
[2026-03-20 00:06:06] HITS file was successfully produced:
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc 196105186 Mar 20 00:03 shared/HITS.pool.root.1
[2026-03-20 00:06:06]  *** Contents of shared directory: ***
[2026-03-20 00:06:06] total 403100
[2026-03-20 00:06:06] -rw-r--r--. 2 boinc boinc 213346934 Mar 19 19:36 ATLAS.root_0
[2026-03-20 00:06:06] -rw-r--r--. 2 boinc boinc     15845 Mar 19 19:36 start_atlas.sh
[2026-03-20 00:06:06] -rw-r--r--. 2 boinc boinc    597522 Mar 19 19:36 input.tar.gz
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc 196105186 Mar 20 00:03 HITS.pool.root.1
[2026-03-20 00:06:06] -rw-------. 1 boinc boinc   2703360 Mar 20 00:06 result.tar.gz
00:06:07 (763): run_atlas exited; CPU time 60168.765967
00:06:07 (763): called boinc_finish(0)

</stderr_txt>
]]>

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