Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:35:08 (14907): wrapper (7.7.26015): starting
00:35:08 (14907): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 00:35:08] Arguments: --nthreads 8
[2026-03-19 00:35:08] Threads: 8
[2026-03-19 00:35:08] Checking for CVMFS
[2026-03-19 00:35:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 00:35:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 00:35:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 00:35:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 00:35:08] 2.11.0.0 7984 227624 94592 157434 3 188 2913828 4096000 917 130560 2 14692652 99.448 14881008 431 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-19 00:35:08] CVMFS is ok
[2026-03-19 00:35:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 00:35:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 00:35:08] Further information can be found at the LHC@home message board.
[2026-03-19 00:35:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 00:35:08] Checking for apptainer binary...
[2026-03-19 00:35:08] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-19 00:35:08] apptainer is not installed, using version from CVMFS
[2026-03-19 00:35:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 00:35:09] WARNING: Environment variable TMPDIR already has value [/tmp/job_11344017/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node221
[2026-03-19 00:35:09] apptainer works
[2026-03-19 00:35:09] Set ATHENA_PROC_NUMBER=8
[2026-03-19 00:35:09] Set ATHENA_CORE_NUMBER=8
[2026-03-19 00:35:09] Starting ATLAS job with PandaID=7058951601
[2026-03-19 00:35:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11344017/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 02:53:35]  *** The last 200 lines of the pilot log: ***
[2026-03-19 02:53:35] 2026-03-19 01:52:29,316 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,316 | INFO     | reading metadata from: /tmp/job_11344017/atlas/pilot/slots/0/PanDA_Pilot-7058951601/jobReport.json
[2026-03-19 02:53:35] 2026-03-19 01:52:29,318 | INFO     | added worker_node to metadata from /tmp/job_11344017/atlas/pilot/slots/0/workernode_map.json
[2026-03-19 02:53:35] 2026-03-19 01:52:29,318 | INFO     | this job has now completed (state=finished)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,318 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,318 | INFO     | log transfer has been attempted: DONE
[2026-03-19 02:53:35] 2026-03-19 01:52:29,318 | INFO     | job 7058951601 has finished - writing final server update
[2026-03-19 02:53:35] 2026-03-19 01:52:29,318 | INFO     | total number of processed events: 400 (read)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,334 | INFO     | using path: /tmp/job_11344017/atlas/pilot/slots/0/PanDA_Pilot-7058951601/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,335 | INFO     | extracted standard info from prmon json
[2026-03-19 02:53:35] 2026-03-19 01:52:29,335 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 02:53:35] 2026-03-19 01:52:29,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 02:53:35] 2026-03-19 01:52:29,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 02:53:35] 2026-03-19 01:52:29,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 02:53:35] 2026-03-19 01:52:29,336 | INFO     | fitting pss+swap vs Time
[2026-03-19 02:53:35] 2026-03-19 01:52:29,336 | INFO     | sum of square deviations: 762879420.0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | sum of deviations: 12725869897.999998
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | mean x: 1773881020.0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | mean y: 2519748.637037037
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | intersect: -29588236645.147366
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | chi2: 1.1599903694827078
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | sum of square deviations: 681212772.5
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | sum of deviations: 12102548504.499998
[2026-03-19 02:53:35] 2026-03-19 01:52:29,337 | INFO     | mean x: 1773880867.5
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | mean y: 2518585.8384615383
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | intersect: -31512567605.713066
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | chi2: 1.1613132861609752
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | current chi2=1.1613132861609752 (change=-0.11404548805498159 %)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | right removable region: 129
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | sum of square deviations: 681212772.5
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | sum of deviations: -4002471628.9999995
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | mean x: 1773881172.5
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | mean y: 2550445.3538461537
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | intersect: 10425004857.199894
[2026-03-19 02:53:35] 2026-03-19 01:52:29,338 | INFO     | chi2: 0.008849802211446272
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | current chi2=0.008849802211446272 (change=99.2370796823604 %)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | sum of square deviations: 605592750.0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | sum of deviations: -3657369009.0000005
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | mean x: 1773881325.0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | mean y: 2549734.56
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | intersect: 10715588461.821608
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | chi2: 0.008582446574578262
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | current chi2=0.008582446574578262 (change=3.021035165308149 %)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | left removable region: 20
[2026-03-19 02:53:35] 2026-03-19 01:52:29,339 | INFO     | sum of square deviations: 401533110.0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | sum of deviations: -1670777983.0000007
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | mean x: 1773881447.0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | mean y: 2544763.990825688
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | intersect: 7383659776.149556
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | chi2: 0.005914880381151598
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | current memory leak: -4.16 B/s (using 109 data points, chi2=0.01)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | could have reported an average CPU frequency of 2505 MHz (8 samples)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | ..............................
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . Timing measurements:
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . get job = 0 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . initial setup = 2 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . payload setup = 3 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . stage-in = 0 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . payload execution = 8211 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . stage-out = 0 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | . log creation = 0 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,340 | INFO     | ..............................
[2026-03-19 02:53:35] 2026-03-19 01:52:29,386 | INFO     | 
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | job summary report
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | --------------------------------------------------
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | PanDA job id: 7058951601
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | task id: 49176206
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | errors: (none)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | pilot state: finished 
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | transexitcode: 0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | exeerrorcode: 0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | exeerrordiag: 
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | exitcode: 0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | exitmsg: OK
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | cpuconsumptiontime: 60123 s
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | nevents: 400
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | neventsw: 0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | pid: 29082
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | pgrp: 29082
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | corecount: 8
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | event service: False
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | sizes: {0: 2279128, 1: 2280315, 11: 2280315, 8219: 2308285, 8220: 2317313, 8222: 2317369, 8223: 2317691}
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | --------------------------------------------------
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | 
[2026-03-19 02:53:35] 2026-03-19 01:52:29,387 | INFO     | executing command: ls -lF /tmp/job_11344017/atlas/pilot/slots/0
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | job 7058951601 has completed (purged errors)
[2026-03-19 02:53:35] 2026-03-19 01:52:29,398 | INFO     | overall cleanup function is called
[2026-03-19 02:53:35] 2026-03-19 01:52:30,404 | INFO     | --- collectZombieJob: --- 10, [29082]
[2026-03-19 02:53:35] 2026-03-19 01:52:30,404 | INFO     | zombie collector waiting for pid 29082
[2026-03-19 02:53:35] 2026-03-19 01:52:30,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 02:53:35] 2026-03-19 01:52:30,404 | INFO     | collected zombie processes
[2026-03-19 02:53:35] 2026-03-19 01:52:30,404 | INFO     | will attempt to kill all subprocesses of pid=29082
[2026-03-19 02:53:35] 2026-03-19 01:52:30,506 | INFO     | process IDs to be killed: [29082] (in reverse order)
[2026-03-19 02:53:35] 2026-03-19 01:52:30,542 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 02:53:35] 2026-03-19 01:52:30,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 02:53:35] 2026-03-19 01:52:30,546 | INFO     | did not find any defunct processes belonging to 29082
[2026-03-19 02:53:35] 2026-03-19 01:52:30,549 | INFO     | did not find any defunct processes belonging to 29082
[2026-03-19 02:53:35] 2026-03-19 01:52:30,549 | INFO     | ready for new job
[2026-03-19 02:53:35] 2026-03-19 01:52:30,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 02:53:35] 2026-03-19 01:52:30,550 | INFO     | **************************************
[2026-03-19 02:53:35] 2026-03-19 01:52:30,550 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 02:53:35] 2026-03-19 01:52:30,550 | INFO     | **************************************
[2026-03-19 02:53:35] 2026-03-19 01:52:30,550 | INFO     | 
[2026-03-19 02:53:35] 2026-03-19 01:52:30,565 | INFO     | architecture information:
[2026-03-19 02:53:35] 2026-03-19 01:52:30,565 | INFO     | executing command: cat /etc/os-release
[2026-03-19 02:53:35] 2026-03-19 01:52:30,571 | INFO     | cat /etc/os-release:
[2026-03-19 02:53:35] NAME="CentOS Linux"
[2026-03-19 02:53:35] VERSION="7 (Core)"
[2026-03-19 02:53:35] ID="centos"
[2026-03-19 02:53:35] ID_LIKE="rhel fedora"
[2026-03-19 02:53:35] VERSION_ID="7"
[2026-03-19 02:53:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 02:53:35] ANSI_COLOR="0;31"
[2026-03-19 02:53:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 02:53:35] HOME_URL="https://www.centos.org/"
[2026-03-19 02:53:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 02:53:35] 
[2026-03-19 02:53:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 02:53:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 02:53:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 02:53:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 02:53:35] 
[2026-03-19 02:53:35] 2026-03-19 01:52:30,572 | INFO     | **************************************
[2026-03-19 02:53:35] 2026-03-19 01:52:31,074 | INFO     | executing command: df -mP /tmp/job_11344017/atlas/pilot/slots/0
[2026-03-19 02:53:35] 2026-03-19 01:52:31,080 | INFO     | sufficient remaining disk space (225042235392 B)
[2026-03-19 02:53:35] 2026-03-19 01:52:31,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 02:53:35] 2026-03-19 01:52:31,080 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 02:53:35] 2026-03-19 01:52:31,080 | INFO     | update_server=False
[2026-03-19 02:53:35] 2026-03-19 01:52:31,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 02:53:35] 2026-03-19 01:52:31,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:53:35] 2026-03-19 01:52:31,282 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-19 02:53:35] 2026-03-19 01:52:31,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-19 02:53:35] 2026-03-19 01:52:31,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:53:35] 2026-03-19 01:52:31,282 | INFO     | will abort loop
[2026-03-19 02:53:35] 2026-03-19 01:52:31,300 | INFO     | all payload control threads have been joined
[2026-03-19 02:53:35] 2026-03-19 01:52:31,544 | INFO     | all data control threads have been joined
[2026-03-19 02:53:35] 2026-03-19 01:52:31,565 | INFO     | all job control threads have been joined
[2026-03-19 02:53:35] 2026-03-19 01:52:31,601 | INFO     | job.realtimelogging is not enabled
[2026-03-19 02:53:35] 2026-03-19 01:52:32,086 | INFO     | [job] retrieve thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,086 | INFO     | [job] queue monitor thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,287 | INFO     | [job] job monitor thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,305 | INFO     | [payload] control thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,491 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 02:53:35] 2026-03-19 01:52:32,549 | INFO     | [data] control thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,570 | INFO     | [job] control thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,572 | INFO     | [data] copytool_in thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:32,606 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:33,002 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:33,124 | INFO     | [payload] failed_post thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:33,372 | INFO     | [job] validate thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:33,436 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:33,471 | INFO     | [payload] validate_post thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:34,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 02:53:35] 2026-03-19 01:52:34,525 | INFO     | [data] copytool_out thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:52:38,436 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 02:53:35] 2026-03-19 01:53:01,600 | INFO     | PID=18684 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 02:53:35] 2026-03-19 01:53:01,600 | INFO     | .. there are 5 such processes running
[2026-03-19 02:53:35] 2026-03-19 01:53:01,600 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 02:53:35] 2026-03-19 01:53:01,600 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 02:53:35] 2026-03-19 01:53:01,600 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 02:53:35] 2026-03-19 01:53:29,150 | INFO     | [monitor] cgroup control has ended
[2026-03-19 02:53:35] 2026-03-19 01:53:30,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-19 02:53:35] 2026-03-19 01:53:31,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 02:53:35] 2026-03-19 01:53:31,751 | INFO     | [monitor] control thread has ended
[2026-03-19 02:53:35] 2026-03-19 01:53:35,808 | INFO     | all workflow threads have been joined
[2026-03-19 02:53:35] 2026-03-19 01:53:35,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 02:53:35] 2026-03-19 01:53:35,809 | INFO     | traces error code: 0
[2026-03-19 02:53:35] 2026-03-19 01:53:35,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 02:53:35] 2026-03-19 01:53:35,860 [wrapper] ==== pilot stdout END ====
[2026-03-19 02:53:35] 2026-03-19 01:53:35,862 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 02:53:35] 2026-03-19 01:53:35,863 [wrapper] pilotpid: 18684
[2026-03-19 02:53:35] 2026-03-19 01:53:35,864 [wrapper] Pilot exit status: 0
[2026-03-19 02:53:35] 2026-03-19 01:53:35,868 [wrapper] pandaids: 7058951601
[2026-03-19 02:53:35] 2026-03-19 01:53:35,891 [wrapper] cleanup supervisor_pilot  9214 18685
[2026-03-19 02:53:35] 2026-03-19 01:53:35,892 [wrapper] Test setup, not cleaning
[2026-03-19 02:53:35] 2026-03-19 01:53:35,893 [wrapper] apfmon messages muted
[2026-03-19 02:53:35] 2026-03-19 01:53:35,894 [wrapper] ==== wrapper stdout END ====
[2026-03-19 02:53:35] 2026-03-19 01:53:35,895 [wrapper] ==== wrapper stderr END ====
[2026-03-19 02:53:35]  *** Error codes and diagnostics ***
[2026-03-19 02:53:35]     "exeErrorCode": 0,
[2026-03-19 02:53:35]     "exeErrorDiag": "",
[2026-03-19 02:53:35]     "pilotErrorCode": 0,
[2026-03-19 02:53:35]     "pilotErrorDiag": "",
[2026-03-19 02:53:35]  *** Listing of results directory ***
[2026-03-19 02:53:36] total 477248
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-19 02:53:36] -rwx------ 1 mf493845 unix-user     36322 Mar 18 14:23 runpilot2-wrapper.sh
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      5111 Mar 18 14:28 queuedata.json
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user       100 Mar 18 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 02:53:36] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 23:33 run_atlas
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user       105 Mar 18 23:33 job.xml
[2026-03-19 02:53:36] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 19 00:35 start_atlas.sh
[2026-03-19 02:53:36] drwxrwx--x 2 mf493845 unix-user       100 Mar 19 00:35 shared
[2026-03-19 02:53:36] -rw-r--r-- 2 mf493845 unix-user    597543 Mar 19 00:35 input.tar.gz
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      6390 Mar 19 00:35 init_data.xml
[2026-03-19 02:53:36] -rw-r--r-- 2 mf493845 unix-user 242059816 Mar 19 00:35 EVNT.49133006._000026.pool.root.1
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user         0 Mar 19 00:35 boinc_setup_complete
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      8192 Mar 19 00:35 boinc_mmap_file
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user         0 Mar 19 00:35 boinc_lockfile
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      2583 Mar 19 00:35 pandaJob.out
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user   1010350 Mar 19 00:35 agis_schedconf.cvmfs.json
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user   1511579 Mar 19 00:35 agis_ddmendpoints.agis.ALL.json
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user       416 Mar 19 00:35 workernode_map.json
[2026-03-19 02:53:36] drwx------ 5 mf493845 unix-user       440 Mar 19 00:35 pilot3
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user 239553888 Mar 19 02:51 HITS.49176206._000645.pool.root.1
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user        95 Mar 19 02:52 pilot_heartbeat.json
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      1015 Mar 19 02:52 memory_monitor_summary.json
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user    384217 Mar 19 02:52 log.49176206._000645.job.log.tgz.1
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      6298 Mar 19 02:52 heartbeat.json
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      5089 Mar 19 02:53 pilotlog.txt
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user   1204216 Mar 19 02:53 log.49176206._000645.job.log.1
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user       357 Mar 19 02:53 output.list
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user       620 Mar 19 02:53 runtime_log
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user   1607680 Mar 19 02:53 result.tar.gz
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user      9219 Mar 19 02:53 runtime_log.err
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user       643 Mar 19 02:53 gmMKDmS35M9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1LzLDmFNCeLm.diag
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user     21742 Mar 19 02:53 stderr.txt
[2026-03-19 02:53:36] HITS file was successfully produced:
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user 239553888 Mar 19 02:51 shared/HITS.pool.root.1
[2026-03-19 02:53:36]  *** Contents of shared directory: ***
[2026-03-19 02:53:36] total 472500
[2026-03-19 02:53:36] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 19 00:35 start_atlas.sh
[2026-03-19 02:53:36] -rw-r--r-- 2 mf493845 unix-user    597543 Mar 19 00:35 input.tar.gz
[2026-03-19 02:53:36] -rw-r--r-- 2 mf493845 unix-user 242059816 Mar 19 00:35 ATLAS.root_0
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user 239553888 Mar 19 02:51 HITS.pool.root.1
[2026-03-19 02:53:36] -rw------- 1 mf493845 unix-user   1607680 Mar 19 02:53 result.tar.gz
02:53:37 (14907): run_atlas exited; CPU time 60250.282504
02:53:37 (14907): called boinc_finish(0)

</stderr_txt>
]]>

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