Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:35:47 (22204): wrapper (7.7.26015): starting
00:35:47 (22204): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 00:35:47] Arguments: --nthreads 8
[2026-03-19 00:35:47] Threads: 8
[2026-03-19 00:35:47] Checking for CVMFS
[2026-03-19 00:35:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 00:35:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 00:35:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 00:35:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 00:35:48] 2.11.0.0 4525 134093 83624 157434 0 188 2296963 4096000 6419 130560 2 15253944 99.617 8932441 355 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-19 00:35:48] CVMFS is ok
[2026-03-19 00:35:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 00:35:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 00:35:48] Further information can be found at the LHC@home message board.
[2026-03-19 00:35:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 00:35:48] Checking for apptainer binary...
[2026-03-19 00:35:48] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-19 00:35:48] apptainer is not installed, using version from CVMFS
[2026-03-19 00:35:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 00:35:48] WARNING: Environment variable TMPDIR already has value [/tmp/job_11344028/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node047
[2026-03-19 00:35:48] apptainer works
[2026-03-19 00:35:48] Set ATHENA_PROC_NUMBER=8
[2026-03-19 00:35:48] Set ATHENA_CORE_NUMBER=8
[2026-03-19 00:35:48] Starting ATLAS job with PandaID=7058951266
[2026-03-19 00:35:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11344028/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 02:50:31]  *** The last 200 lines of the pilot log: ***
[2026-03-19 02:50:31] 2026-03-19 01:49:59,536 | INFO     | this job has now completed (state=finished)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,536 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,536 | INFO     | log transfer has been attempted: DONE
[2026-03-19 02:50:31] 2026-03-19 01:49:59,536 | INFO     | job 7058951266 has finished - writing final server update
[2026-03-19 02:50:31] 2026-03-19 01:49:59,537 | INFO     | total number of processed events: 400 (read)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,556 | INFO     | using path: /tmp/job_11344028/atlas/pilot/slots/0/PanDA_Pilot-7058951266/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,556 | INFO     | extracted standard info from prmon json
[2026-03-19 02:50:31] 2026-03-19 01:49:59,556 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 02:50:31] 2026-03-19 01:49:59,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 02:50:31] 2026-03-19 01:49:59,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 02:50:31] 2026-03-19 01:49:59,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 02:50:31] 2026-03-19 01:49:59,558 | INFO     | fitting pss+swap vs Time
[2026-03-19 02:50:31] 2026-03-19 01:49:59,558 | INFO     | sum of square deviations: 713140813.0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,558 | INFO     | sum of deviations: 4504555919.0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,558 | INFO     | mean x: 1773880966.5
[2026-03-19 02:50:31] 2026-03-19 01:49:59,558 | INFO     | mean y: 2582408.4393939395
[2026-03-19 02:50:31] 2026-03-19 01:49:59,558 | INFO     | intersect: -11202141625.84332
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | chi2: 1.1961630233489857
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | sum of square deviations: 635130048.0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | sum of deviations: 4732094154.000003
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | mean x: 1773880814.0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | mean y: 2582853.4566929135
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | intersect: -13213877391.583023
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | chi2: 1.1975696930017927
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | current chi2=1.1975696930017927 (change=-0.11759848995069631 %)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | right removable region: 126
[2026-03-19 02:50:31] 2026-03-19 01:49:59,559 | INFO     | sum of square deviations: 635130048.0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,560 | INFO     | sum of deviations: -11532629072.999998
[2026-03-19 02:50:31] 2026-03-19 01:49:59,560 | INFO     | mean x: 1773881119.0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,560 | INFO     | mean y: 2613178.68503937
[2026-03-19 02:50:31] 2026-03-19 01:49:59,560 | INFO     | intersect: 32212572429.463814
[2026-03-19 02:50:31] 2026-03-19 01:49:59,560 | INFO     | chi2: 0.05723408611445476
[2026-03-19 02:50:31] 2026-03-19 01:49:59,560 | INFO     | current chi2=0.05723408611445476 (change=95.21519349810596 %)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,560 | INFO     | sum of square deviations: 563026370.5
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | sum of deviations: -10476263433.499994
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | mean x: 1773881271.5
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | mean y: 2610927.12295082
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | intersect: 33009319802.024445
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | chi2: 0.056782050858176426
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | current chi2=0.056782050858176426 (change=0.7898007760172333 %)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | left removable region: 20
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | sum of square deviations: 369281342.5
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | sum of deviations: -6083391011.500001
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | mean x: 1773881393.5
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | mean y: 2603714.0283018867
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | intersect: 29224806091.298405
[2026-03-19 02:50:31] 2026-03-19 01:49:59,561 | INFO     | chi2: 0.05346741365658325
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | current memory leak: -16.47 B/s (using 106 data points, chi2=0.05)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | could have reported an average CPU frequency of 3199 MHz (8 samples)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | ..............................
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . Timing measurements:
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . get job = 0 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . initial setup = 2 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . payload setup = 3 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . stage-in = 0 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . payload execution = 8023 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . stage-out = 0 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | . log creation = 0 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,562 | INFO     | ..............................
[2026-03-19 02:50:31] 2026-03-19 01:49:59,609 | INFO     | 
[2026-03-19 02:50:31] 2026-03-19 01:49:59,609 | INFO     | job summary report
[2026-03-19 02:50:31] 2026-03-19 01:49:59,609 | INFO     | --------------------------------------------------
[2026-03-19 02:50:31] 2026-03-19 01:49:59,609 | INFO     | PanDA job id: 7058951266
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | task id: 49176206
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | errors: (none)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | pilot state: finished 
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | transexitcode: 0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | exeerrorcode: 0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | exeerrordiag: 
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | exitcode: 0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | exitmsg: OK
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | cpuconsumptiontime: 59988 s
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | nevents: 400
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | neventsw: 0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | pid: 30886
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | pgrp: 30886
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | corecount: 8
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | event service: False
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | sizes: {0: 2279808, 1: 2280323, 11: 2280323, 8030: 2317297, 8033: 2317297, 8034: 2317491}
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | --------------------------------------------------
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | 
[2026-03-19 02:50:31] 2026-03-19 01:49:59,610 | INFO     | executing command: ls -lF /tmp/job_11344028/atlas/pilot/slots/0
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | job 7058951266 has completed (purged errors)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,621 | INFO     | overall cleanup function is called
[2026-03-19 02:50:31] 2026-03-19 01:49:59,685 | WARNING  | process 30886 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 02:50:31] 2026-03-19 01:49:59,762 | INFO     | using path: /tmp/job_11344028/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 02:50:31] 2026-03-19 01:49:59,851 | INFO     | number of running child processes to parent process 30886: 1
[2026-03-19 02:50:31] 2026-03-19 01:49:59,851 | INFO     | maximum number of monitored processes: 6
[2026-03-19 02:50:31] 2026-03-19 01:49:59,851 | INFO     | aborting job monitoring since job object (job id=7058951266) has expired
[2026-03-19 02:50:31] 2026-03-19 01:50:00,627 | INFO     | --- collectZombieJob: --- 10, [30886]
[2026-03-19 02:50:31] 2026-03-19 01:50:00,627 | INFO     | zombie collector waiting for pid 30886
[2026-03-19 02:50:31] 2026-03-19 01:50:00,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 02:50:31] 2026-03-19 01:50:00,627 | INFO     | collected zombie processes
[2026-03-19 02:50:31] 2026-03-19 01:50:00,627 | INFO     | will attempt to kill all subprocesses of pid=30886
[2026-03-19 02:50:31] 2026-03-19 01:50:00,724 | INFO     | process IDs to be killed: [30886] (in reverse order)
[2026-03-19 02:50:31] 2026-03-19 01:50:00,758 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 02:50:31] 2026-03-19 01:50:00,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 02:50:31] 2026-03-19 01:50:00,761 | INFO     | did not find any defunct processes belonging to 30886
[2026-03-19 02:50:31] 2026-03-19 01:50:00,764 | INFO     | did not find any defunct processes belonging to 30886
[2026-03-19 02:50:31] 2026-03-19 01:50:00,764 | INFO     | ready for new job
[2026-03-19 02:50:31] 2026-03-19 01:50:00,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 02:50:31] 2026-03-19 01:50:00,765 | INFO     | **************************************
[2026-03-19 02:50:31] 2026-03-19 01:50:00,765 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 02:50:31] 2026-03-19 01:50:00,765 | INFO     | **************************************
[2026-03-19 02:50:31] 2026-03-19 01:50:00,765 | INFO     | 
[2026-03-19 02:50:31] 2026-03-19 01:50:00,779 | INFO     | architecture information:
[2026-03-19 02:50:31] 2026-03-19 01:50:00,779 | INFO     | executing command: cat /etc/os-release
[2026-03-19 02:50:31] 2026-03-19 01:50:00,785 | INFO     | cat /etc/os-release:
[2026-03-19 02:50:31] NAME="CentOS Linux"
[2026-03-19 02:50:31] VERSION="7 (Core)"
[2026-03-19 02:50:31] ID="centos"
[2026-03-19 02:50:31] ID_LIKE="rhel fedora"
[2026-03-19 02:50:31] VERSION_ID="7"
[2026-03-19 02:50:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 02:50:31] ANSI_COLOR="0;31"
[2026-03-19 02:50:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 02:50:31] HOME_URL="https://www.centos.org/"
[2026-03-19 02:50:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 02:50:31] 
[2026-03-19 02:50:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 02:50:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 02:50:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 02:50:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 02:50:31] 
[2026-03-19 02:50:31] 2026-03-19 01:50:00,785 | INFO     | **************************************
[2026-03-19 02:50:31] 2026-03-19 01:50:01,288 | INFO     | executing command: df -mP /tmp/job_11344028/atlas/pilot/slots/0
[2026-03-19 02:50:31] 2026-03-19 01:50:01,294 | INFO     | sufficient remaining disk space (227593420800 B)
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | INFO     | update_server=False
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 02:50:31] 2026-03-19 01:50:01,295 | INFO     | aborting loop
[2026-03-19 02:50:31] 2026-03-19 01:50:01,853 | INFO     | all payload control threads have been joined
[2026-03-19 02:50:31] 2026-03-19 01:50:02,098 | INFO     | all job control threads have been joined
[2026-03-19 02:50:31] 2026-03-19 01:50:02,140 | INFO     | all data control threads have been joined
[2026-03-19 02:50:31] 2026-03-19 01:50:02,300 | INFO     | [job] retrieve thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:02,300 | INFO     | [job] queue monitor thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:02,300 | INFO     | [job] job monitor thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:02,587 | INFO     | [payload] validate_post thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:02,817 | INFO     | [payload] failed_post thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:02,858 | INFO     | [payload] control thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,104 | INFO     | [job] control thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,146 | INFO     | [data] control thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,292 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,300 | INFO     | [data] copytool_out thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,397 | INFO     | [job] validate thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,530 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,637 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:03,734 | INFO     | [data] copytool_in thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:04,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 02:50:31] 2026-03-19 01:50:07,136 | INFO     | [monitor] cgroup control has ended
[2026-03-19 02:50:31] 2026-03-19 01:50:08,344 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:11,997 | INFO     | job.realtimelogging is not enabled
[2026-03-19 02:50:31] 2026-03-19 01:50:13,002 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 02:50:31] 2026-03-19 01:50:14,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-19 02:50:31] 2026-03-19 01:50:19,044 | INFO     | all workflow threads have been joined
[2026-03-19 02:50:31] 2026-03-19 01:50:19,044 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 02:50:31] 2026-03-19 01:50:19,045 | INFO     | traces error code: 0
[2026-03-19 02:50:31] 2026-03-19 01:50:19,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 02:50:31] 2026-03-19 01:50:31,193 | INFO     | PID=26075 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 02:50:31] 2026-03-19 01:50:31,193 | INFO     | .. there are 3 such processes running
[2026-03-19 02:50:31] 2026-03-19 01:50:31,193 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 02:50:31] 2026-03-19 01:50:31,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 02:50:31] 2026-03-19 01:50:31,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 02:50:31] 2026-03-19 01:50:31,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 02:50:31] 2026-03-19 01:50:31,193 | INFO     | [monitor] control thread has ended
[2026-03-19 02:50:31] 2026-03-19 01:50:31,244 [wrapper] ==== pilot stdout END ====
[2026-03-19 02:50:31] 2026-03-19 01:50:31,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 02:50:31] 2026-03-19 01:50:31,246 [wrapper] pilotpid: 26075
[2026-03-19 02:50:31] 2026-03-19 01:50:31,247 [wrapper] Pilot exit status: 0
[2026-03-19 02:50:31] 2026-03-19 01:50:31,252 [wrapper] pandaids: 7058951266
[2026-03-19 02:50:31] 2026-03-19 01:50:31,275 [wrapper] cleanup supervisor_pilot 11954 26076
[2026-03-19 02:50:31] 2026-03-19 01:50:31,276 [wrapper] Test setup, not cleaning
[2026-03-19 02:50:31] 2026-03-19 01:50:31,277 [wrapper] apfmon messages muted
[2026-03-19 02:50:31] 2026-03-19 01:50:31,278 [wrapper] ==== wrapper stdout END ====
[2026-03-19 02:50:31] 2026-03-19 01:50:31,279 [wrapper] ==== wrapper stderr END ====
[2026-03-19 02:50:31]  *** Error codes and diagnostics ***
[2026-03-19 02:50:31]     "exeErrorCode": 0,
[2026-03-19 02:50:31]     "exeErrorDiag": "",
[2026-03-19 02:50:31]     "pilotErrorCode": 0,
[2026-03-19 02:50:31]     "pilotErrorDiag": "",
[2026-03-19 02:50:31]  *** Listing of results directory ***
[2026-03-19 02:50:31] total 489296
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-19 02:50:31] -rwx------ 1 mf493845 unix-user     36322 Mar 18 14:23 runpilot2-wrapper.sh
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user      5111 Mar 18 14:27 queuedata.json
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user       100 Mar 18 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 02:50:31] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 23:34 run_atlas
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user       105 Mar 18 23:34 job.xml
[2026-03-19 02:50:31] -rw-r--r-- 2 mf493845 unix-user 242200684 Mar 19 00:35 EVNT.49133006._000013.pool.root.1
[2026-03-19 02:50:31] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 19 00:35 start_atlas.sh
[2026-03-19 02:50:31] drwxrwx--x 2 mf493845 unix-user       100 Mar 19 00:35 shared
[2026-03-19 02:50:31] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 19 00:35 input.tar.gz
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user      6389 Mar 19 00:35 init_data.xml
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user         0 Mar 19 00:35 boinc_setup_complete
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user      8192 Mar 19 00:35 boinc_mmap_file
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user         0 Mar 19 00:35 boinc_lockfile
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user      2591 Mar 19 00:35 pandaJob.out
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user   1010350 Mar 19 00:35 agis_schedconf.cvmfs.json
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user   1511579 Mar 19 00:35 agis_ddmendpoints.agis.ALL.json
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user       416 Mar 19 00:35 workernode_map.json
[2026-03-19 02:50:31] drwx------ 5 mf493845 unix-user       440 Mar 19 00:35 pilot3
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user 251815006 Mar 19 02:49 HITS.49176206._000324.pool.root.1
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user        95 Mar 19 02:49 pilot_heartbeat.json
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user      1017 Mar 19 02:49 memory_monitor_summary.json
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user    385018 Mar 19 02:49 log.49176206._000324.job.log.tgz.1
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user      6310 Mar 19 02:49 heartbeat.json
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user       820 Mar 19 02:50 pilotlog.txt
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user   1169724 Mar 19 02:50 log.49176206._000324.job.log.1
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user       357 Mar 19 02:50 output.list
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user       620 Mar 19 02:50 runtime_log
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user   1576960 Mar 19 02:50 result.tar.gz
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user      9219 Mar 19 02:50 runtime_log.err
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user       644 Mar 19 02:50 mmiMDmH35M9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9E2LDmDAeeFn.diag
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user     21704 Mar 19 02:50 stderr.txt
[2026-03-19 02:50:31] HITS file was successfully produced:
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user 251815006 Mar 19 02:49 shared/HITS.pool.root.1
[2026-03-19 02:50:31]  *** Contents of shared directory: ***
[2026-03-19 02:50:31] total 484584
[2026-03-19 02:50:31] -rw-r--r-- 2 mf493845 unix-user 242200684 Mar 19 00:35 ATLAS.root_0
[2026-03-19 02:50:31] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 19 00:35 start_atlas.sh
[2026-03-19 02:50:31] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 19 00:35 input.tar.gz
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user 251815006 Mar 19 02:49 HITS.pool.root.1
[2026-03-19 02:50:31] -rw------- 1 mf493845 unix-user   1576960 Mar 19 02:50 result.tar.gz
02:50:33 (22204): run_atlas exited; CPU time 60100.377659
02:50:33 (22204): called boinc_finish(0)

</stderr_txt>
]]>

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