Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:19:11 (12193): wrapper (7.7.26015): starting
00:19:11 (12193): wrapper: running run_atlas (--nthreads 8)
[2026-03-19 00:19:11] Arguments: --nthreads 8
[2026-03-19 00:19:11] Threads: 8
[2026-03-19 00:19:11] Checking for CVMFS
[2026-03-19 00:19:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 00:19:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 00:19:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 00:19:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 00:19:11] 2.11.0.0 4550 227480 107132 157434 0 49 2213113 4096001 917 130560 3 22049910 99.588 18322416 477 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-19 00:19:11] CVMFS is ok
[2026-03-19 00:19:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 00:19:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 00:19:11] Further information can be found at the LHC@home message board.
[2026-03-19 00:19:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 00:19:11] Checking for apptainer binary...
[2026-03-19 00:19:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-19 00:19:11] apptainer is not installed, using version from CVMFS
[2026-03-19 00:19:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 00:19:12] WARNING: Environment variable TMPDIR already has value [/tmp/job_11343982/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node024
[2026-03-19 00:19:12] apptainer works
[2026-03-19 00:19:12] Set ATHENA_PROC_NUMBER=8
[2026-03-19 00:19:12] Set ATHENA_CORE_NUMBER=8
[2026-03-19 00:19:12] Starting ATLAS job with PandaID=7057278077
[2026-03-19 00:19:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11343982/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 01:17:30]  *** The last 200 lines of the pilot log: ***
[2026-03-19 01:17:30]  direct_access_wan=False
[2026-03-19 01:17:30]  domain=
[2026-03-19 01:17:30]  filesize=291067
[2026-03-19 01:17:30]  filetype=log
[2026-03-19 01:17:30]  guid=be74f81a-21ae-4ddd-8f80-2a4e2aa9b54a
[2026-03-19 01:17:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-19 01:17:30]  is_altstaged=None
[2026-03-19 01:17:30]  is_tar=False
[2026-03-19 01:17:30]  lfn=log.48967094._011558.job.log.tgz.1
[2026-03-19 01:17:30]  mtime=0
[2026-03-19 01:17:30]  protocol_id=None
[2026-03-19 01:17:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 01:17:30]  replicas=None
[2026-03-19 01:17:30]  scope=mc23_13p6TeV
[2026-03-19 01:17:30]  status=None
[2026-03-19 01:17:30]  status_code=0
[2026-03-19 01:17:30]  storage_token=
[2026-03-19 01:17:30]  surl=/tmp/job_11343982/atlas/pilot/slots/0/PanDA_Pilot-7057278077/log.48967094._011558.job.log.tgz.1
[2026-03-19 01:17:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/27/log.48967094._011558.job.log.tgz.1
[2026-03-19 01:17:30]  workdir=None
[2026-03-19 01:17:30] ]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,081 | INFO     | transferring file log.48967094._011558.job.log.tgz.1 from /tmp/job_11343982/atlas/pilot/slots/0/PanDA_Pilot-7057278077/log.48967094._011558.job.log.tgz.1 to /tmp/j
[2026-03-19 01:17:30] 2026-03-19 00:16:46,081 | INFO     | executing command: /usr/bin/env mv /tmp/job_11343982/atlas/pilot/slots/0/PanDA_Pilot-7057278077/log.48967094._011558.job.log.tgz.1 /tmp/job_11343982/atlas/pilot/sl
[2026-03-19 01:17:30] 2026-03-19 00:16:46,089 | INFO     | adding to output.list: log.48967094._011558.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/27/log.48967094._011558.job.log.tg
[2026-03-19 01:17:30] 2026-03-19 00:16:46,089 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 01:17:30] 2026-03-19 00:16:46,089 | INFO     | summary of transferred files:
[2026-03-19 01:17:30] 2026-03-19 00:16:46,089 | INFO     |  -- lfn=log.48967094._011558.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 01:17:30] 2026-03-19 00:16:46,089 | INFO     | stage-out finished correctly
[2026-03-19 01:17:30] 2026-03-19 00:16:46,136 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 01:17:30] 2026-03-19 00:16:46,181 | INFO     | job 7057278077 has state=finished
[2026-03-19 01:17:30] 2026-03-19 00:16:46,181 | INFO     | preparing for final server update for job 7057278077 in state='finished'
[2026-03-19 01:17:30] 2026-03-19 00:16:46,181 | INFO     | reading metadata from: /tmp/job_11343982/atlas/pilot/slots/0/PanDA_Pilot-7057278077/jobReport.json
[2026-03-19 01:17:30] 2026-03-19 00:16:46,182 | INFO     | added worker_node to metadata from /tmp/job_11343982/atlas/pilot/slots/0/workernode_map.json
[2026-03-19 01:17:30] 2026-03-19 00:16:46,182 | INFO     | this job has now completed (state=finished)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,183 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,183 | INFO     | log transfer has been attempted: DONE
[2026-03-19 01:17:30] 2026-03-19 00:16:46,183 | INFO     | job 7057278077 has finished - writing final server update
[2026-03-19 01:17:30] 2026-03-19 00:16:46,183 | INFO     | total number of processed events: 400 (read)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,201 | INFO     | using path: /tmp/job_11343982/atlas/pilot/slots/0/PanDA_Pilot-7057278077/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,201 | INFO     | extracted standard info from prmon json
[2026-03-19 01:17:30] 2026-03-19 00:16:46,201 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 01:17:30] 2026-03-19 00:16:46,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 01:17:30] 2026-03-19 00:16:46,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 01:17:30] 2026-03-19 00:16:46,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 01:17:30] 2026-03-19 00:16:46,202 | INFO     | fitting pss+swap vs Time
[2026-03-19 01:17:30] 2026-03-19 00:16:46,202 | INFO     | sum of square deviations: 38744912.5
[2026-03-19 01:17:30] 2026-03-19 00:16:46,202 | INFO     | sum of deviations: -1769513985.9999998
[2026-03-19 01:17:30] 2026-03-19 00:16:46,202 | INFO     | mean x: 1773877775.5
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | mean y: 2609055.04
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | intersect: 81017156015.28459
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | chi2: 0.025496071484995112
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | current memory leak: -45.67 B/s (using 50 data points, chi2=0.03)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | could have reported an average CPU frequency of 2482 MHz (5 samples)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | ..............................
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . Timing measurements:
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . get job = 0 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . initial setup = 2 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . payload setup = 3 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . stage-in = 0 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . payload execution = 3427 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . stage-out = 0 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | . log creation = 0 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,203 | INFO     | ..............................
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | 
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | job summary report
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | --------------------------------------------------
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | PanDA job id: 7057278077
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | task id: 48967094
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | errors: (none)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | pilot state: finished 
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | transexitcode: 0
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | exeerrorcode: 0
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | exeerrordiag: 
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | exitcode: 0
[2026-03-19 01:17:30] 2026-03-19 00:16:46,250 | INFO     | exitmsg: OK
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | cpuconsumptiontime: 25484 s
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | nevents: 400
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | neventsw: 0
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | pid: 22675
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | pgrp: 22675
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | corecount: 8
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | event service: False
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | sizes: {0: 2280229, 11: 2280229, 3434: 2306020, 3435: 2315274}
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | --------------------------------------------------
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | 
[2026-03-19 01:17:30] 2026-03-19 00:16:46,251 | INFO     | executing command: ls -lF /tmp/job_11343982/atlas/pilot/slots/0
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | job 7057278077 has completed (purged errors)
[2026-03-19 01:17:30] 2026-03-19 00:16:46,261 | INFO     | overall cleanup function is called
[2026-03-19 01:17:30] 2026-03-19 00:16:47,267 | INFO     | --- collectZombieJob: --- 10, [22675]
[2026-03-19 01:17:30] 2026-03-19 00:16:47,267 | INFO     | zombie collector waiting for pid 22675
[2026-03-19 01:17:30] 2026-03-19 00:16:47,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 01:17:30] 2026-03-19 00:16:47,267 | INFO     | collected zombie processes
[2026-03-19 01:17:30] 2026-03-19 00:16:47,267 | INFO     | will attempt to kill all subprocesses of pid=22675
[2026-03-19 01:17:30] 2026-03-19 00:16:47,385 | INFO     | process IDs to be killed: [22675] (in reverse order)
[2026-03-19 01:17:30] 2026-03-19 00:16:47,426 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 01:17:30] 2026-03-19 00:16:47,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 01:17:30] 2026-03-19 00:16:47,430 | INFO     | did not find any defunct processes belonging to 22675
[2026-03-19 01:17:30] 2026-03-19 00:16:47,434 | INFO     | did not find any defunct processes belonging to 22675
[2026-03-19 01:17:30] 2026-03-19 00:16:47,434 | INFO     | ready for new job
[2026-03-19 01:17:30] 2026-03-19 00:16:47,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 01:17:30] 2026-03-19 00:16:47,435 | INFO     | **************************************
[2026-03-19 01:17:30] 2026-03-19 00:16:47,435 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 01:17:30] 2026-03-19 00:16:47,435 | INFO     | **************************************
[2026-03-19 01:17:30] 2026-03-19 00:16:47,435 | INFO     | 
[2026-03-19 01:17:30] 2026-03-19 00:16:47,449 | INFO     | architecture information:
[2026-03-19 01:17:30] 2026-03-19 00:16:47,450 | INFO     | executing command: cat /etc/os-release
[2026-03-19 01:17:30] 2026-03-19 00:16:47,456 | INFO     | cat /etc/os-release:
[2026-03-19 01:17:30] NAME="CentOS Linux"
[2026-03-19 01:17:30] VERSION="7 (Core)"
[2026-03-19 01:17:30] ID="centos"
[2026-03-19 01:17:30] ID_LIKE="rhel fedora"
[2026-03-19 01:17:30] VERSION_ID="7"
[2026-03-19 01:17:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 01:17:30] ANSI_COLOR="0;31"
[2026-03-19 01:17:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 01:17:30] HOME_URL="https://www.centos.org/"
[2026-03-19 01:17:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 01:17:30] 
[2026-03-19 01:17:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 01:17:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 01:17:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 01:17:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 01:17:30] 
[2026-03-19 01:17:30] 2026-03-19 00:16:47,456 | INFO     | **************************************
[2026-03-19 01:17:30] 2026-03-19 00:16:47,959 | INFO     | executing command: df -mP /tmp/job_11343982/atlas/pilot/slots/0
[2026-03-19 01:17:30] 2026-03-19 00:16:47,964 | INFO     | sufficient remaining disk space (224590299136 B)
[2026-03-19 01:17:30] 2026-03-19 00:16:47,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 01:17:30] 2026-03-19 00:16:47,964 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 01:17:30] 2026-03-19 00:16:47,964 | INFO     | update_server=False
[2026-03-19 01:17:30] 2026-03-19 00:16:47,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 01:17:30] 2026-03-19 00:16:47,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:17:30] 2026-03-19 00:16:47,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 01:17:30] 2026-03-19 00:16:48,046 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-19 01:17:30] 2026-03-19 00:16:48,046 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-19 01:17:30] 2026-03-19 00:16:48,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:17:30] 2026-03-19 00:16:48,046 | INFO     | will abort loop
[2026-03-19 01:17:30] 2026-03-19 00:16:48,765 | INFO     | all data control threads have been joined
[2026-03-19 01:17:30] 2026-03-19 00:16:48,851 | INFO     | all payload control threads have been joined
[2026-03-19 01:17:30] 2026-03-19 00:16:48,969 | INFO     | [job] retrieve thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:48,969 | INFO     | [job] queue monitor thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:48,996 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:49,051 | INFO     | [job] job monitor thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:49,078 | INFO     | [data] copytool_in thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:49,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 01:17:30] 2026-03-19 00:16:49,141 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:49,371 | INFO     | all job control threads have been joined
[2026-03-19 01:17:30] 2026-03-19 00:16:49,371 | INFO     | [payload] validate_post thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:49,770 | INFO     | [data] control thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:49,857 | INFO     | [payload] control thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:49,978 | INFO     | [job] validate thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:50,138 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:50,363 | INFO     | [payload] failed_post thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:50,366 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:50,376 | INFO     | [job] control thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:51,147 | INFO     | [data] copytool_out thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:16:51,969 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 01:17:30] 2026-03-19 00:17:19,035 | INFO     | PID=16978 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 01:17:30] 2026-03-19 00:17:19,035 | INFO     | .. there are 8 such processes running
[2026-03-19 01:17:30] 2026-03-19 00:17:19,035 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 01:17:30] 2026-03-19 00:17:19,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 01:17:30] 2026-03-19 00:17:19,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 01:17:30] 2026-03-19 00:17:24,525 | INFO     | [monitor] cgroup control has ended
[2026-03-19 01:17:30] 2026-03-19 00:17:25,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-19 01:17:30] 2026-03-19 00:17:26,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 01:17:30] 2026-03-19 00:17:26,071 | INFO     | [monitor] control thread has ended
[2026-03-19 01:17:30] 2026-03-19 00:17:30,448 | INFO     | all workflow threads have been joined
[2026-03-19 01:17:30] 2026-03-19 00:17:30,448 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 01:17:30] 2026-03-19 00:17:30,448 | INFO     | traces error code: 0
[2026-03-19 01:17:30] 2026-03-19 00:17:30,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 01:17:30] 2026-03-19 00:17:30,503 [wrapper] ==== pilot stdout END ====
[2026-03-19 01:17:30] 2026-03-19 00:17:30,504 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 01:17:30] 2026-03-19 00:17:30,506 [wrapper] pilotpid: 16978
[2026-03-19 01:17:30] 2026-03-19 00:17:30,507 [wrapper] Pilot exit status: 0
[2026-03-19 01:17:30] 2026-03-19 00:17:30,511 [wrapper] pandaids: 7057278077
[2026-03-19 01:17:30] 2026-03-19 00:17:30,538 [wrapper] cleanup supervisor_pilot 21732 16979
[2026-03-19 01:17:30] 2026-03-19 00:17:30,539 [wrapper] Test setup, not cleaning
[2026-03-19 01:17:30] 2026-03-19 00:17:30,540 [wrapper] apfmon messages muted
[2026-03-19 01:17:30] 2026-03-19 00:17:30,541 [wrapper] ==== wrapper stdout END ====
[2026-03-19 01:17:30] 2026-03-19 00:17:30,543 [wrapper] ==== wrapper stderr END ====
[2026-03-19 01:17:30]  *** Error codes and diagnostics ***
[2026-03-19 01:17:30]     "exeErrorCode": 0,
[2026-03-19 01:17:30]     "exeErrorDiag": "",
[2026-03-19 01:17:30]     "pilotErrorCode": 0,
[2026-03-19 01:17:30]     "pilotErrorDiag": "",
[2026-03-19 01:17:30]  *** Listing of results directory ***
[2026-03-19 01:17:30] total 423440
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user    585013 Mar 18 14:20 pilot3.tar.gz
[2026-03-19 01:17:30] -rwx------ 1 mf493845 unix-user     36322 Mar 18 14:21 runpilot2-wrapper.sh
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      5111 Mar 18 14:22 queuedata.json
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user       100 Mar 18 23:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 01:17:30] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 23:23 run_atlas
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user       105 Mar 18 23:23 job.xml
[2026-03-19 01:17:30] drwxrwx--x 2 mf493845 unix-user       100 Mar 19 00:19 shared
[2026-03-19 01:17:30] -rw-r--r-- 2 mf493845 unix-user    597528 Mar 19 00:19 input.tar.gz
[2026-03-19 01:17:30] -rw-r--r-- 2 mf493845 unix-user 220116281 Mar 19 00:19 EVNT.48967092._000463.pool.root.1
[2026-03-19 01:17:30] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 19 00:19 start_atlas.sh
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      6389 Mar 19 00:19 init_data.xml
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user         0 Mar 19 00:19 boinc_setup_complete
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      8192 Mar 19 00:19 boinc_mmap_file
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user         0 Mar 19 00:19 boinc_lockfile
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      2583 Mar 19 00:19 pandaJob.out
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user   1010350 Mar 19 00:19 agis_schedconf.cvmfs.json
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user   1511579 Mar 19 00:19 agis_ddmendpoints.agis.ALL.json
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user       415 Mar 19 00:19 workernode_map.json
[2026-03-19 01:17:30] drwx------ 5 mf493845 unix-user       440 Mar 19 00:19 pilot3
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user 207909621 Mar 19 01:16 HITS.48967094._011558.pool.root.1
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      1016 Mar 19 01:16 memory_monitor_summary.json
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user    291067 Mar 19 01:16 log.48967094._011558.job.log.tgz.1
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      6309 Mar 19 01:16 heartbeat.json
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user        95 Mar 19 01:17 pilot_heartbeat.json
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      5017 Mar 19 01:17 pilotlog.txt
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user    536469 Mar 19 01:17 log.48967094._011558.job.log.1
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user       357 Mar 19 01:17 output.list
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user       620 Mar 19 01:17 runtime_log
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user    849920 Mar 19 01:17 result.tar.gz
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user      9219 Mar 19 01:17 runtime_log.err
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user       643 Mar 19 01:17 B66LDmS15M9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZE2LDmROyzgn.diag
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user     21496 Mar 19 01:17 stderr.txt
[2026-03-19 01:17:30] HITS file was successfully produced:
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user 207909621 Mar 19 01:16 shared/HITS.pool.root.1
[2026-03-19 01:17:30]  *** Contents of shared directory: ***
[2026-03-19 01:17:30] total 419432
[2026-03-19 01:17:30] -rw-r--r-- 2 mf493845 unix-user    597528 Mar 19 00:19 input.tar.gz
[2026-03-19 01:17:30] -rw-r--r-- 2 mf493845 unix-user 220116281 Mar 19 00:19 ATLAS.root_0
[2026-03-19 01:17:30] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 19 00:19 start_atlas.sh
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user 207909621 Mar 19 01:16 HITS.pool.root.1
[2026-03-19 01:17:30] -rw------- 1 mf493845 unix-user    849920 Mar 19 01:17 result.tar.gz
01:17:32 (12193): run_atlas exited; CPU time 25534.513760
01:17:32 (12193): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN