Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:09:17 (1653): wrapper (7.7.26015): starting
23:09:17 (1653): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 23:09:17] Arguments: --nthreads 8
[2026-03-18 23:09:17] Threads: 8
[2026-03-18 23:09:17] Checking for CVMFS
[2026-03-18 23:09:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 23:09:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 23:09:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 23:09:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 23:09:17] 2.11.0.0 9341 20886 74316 157430 3 50 3100455 4096001 0 130560 1 6099296 99.874 1417850 275 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-18 23:09:17] CVMFS is ok
[2026-03-18 23:09:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 23:09:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 23:09:17] Further information can be found at the LHC@home message board.
[2026-03-18 23:09:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 23:09:17] Checking for apptainer binary...
[2026-03-18 23:09:17] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-18 23:09:17] apptainer is not installed, using version from CVMFS
[2026-03-18 23:09:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 23:09:17] WARNING: Environment variable TMPDIR already has value [/tmp/job_11341401/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node009
[2026-03-18 23:09:17] apptainer works
[2026-03-18 23:09:17] Set ATHENA_PROC_NUMBER=8
[2026-03-18 23:09:17] Set ATHENA_CORE_NUMBER=8
[2026-03-18 23:09:17] Starting ATLAS job with PandaID=7056899656
[2026-03-18 23:09:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11341401/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 00:51:40]  *** The last 200 lines of the pilot log: ***
[2026-03-19 00:51:40] 2026-03-18 23:50:49,241 | INFO     | total number of processed events: 400 (read)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,258 | INFO     | using path: /tmp/job_11341401/atlas/pilot/slots/0/PanDA_Pilot-7056899656/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,258 | INFO     | extracted standard info from prmon json
[2026-03-19 00:51:40] 2026-03-18 23:50:49,258 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 00:51:40] 2026-03-18 23:50:49,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 00:51:40] 2026-03-18 23:50:49,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 00:51:40] 2026-03-18 23:50:49,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 00:51:40] 2026-03-18 23:50:49,259 | INFO     | fitting pss+swap vs Time
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | sum of square deviations: 310052325.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | sum of deviations: -30058725.999999046
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | mean x: 1773874801.5
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | mean y: 2493696.04
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | intersect: 174466012.70168346
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | chi2: 1.9297222695906624
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | sum of square deviations: 265828240.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | sum of deviations: 6748641059.999999
[2026-03-19 00:51:40] 2026-03-18 23:50:49,260 | INFO     | mean x: 1773874649.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | mean y: 2516090.547368421
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | intersect: -45031236875.40721
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | chi2: 1.0638928233665492
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | current chi2=1.0638928233665492 (change=44.86808593486228 %)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | sum of square deviations: 226022842.5
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | sum of deviations: 6356905861.5
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | mean x: 1773874496.5
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | mean y: 2514588.5444444446
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | intersect: -49887810918.560936
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | chi2: 1.0662473307247506
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | current chi2=1.0662473307247506 (change=-0.22131057814178018 %)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | right removable region: 89
[2026-03-19 00:51:40] 2026-03-18 23:50:49,261 | INFO     | sum of square deviations: 265828240.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | sum of deviations: -7942065800.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | mean x: 1773874954.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | mean y: 2519839.694736842
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | intersect: 53000017794.163284
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | chi2: 0.9068153190665111
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | current chi2=0.9068153190665111 (change=53.007988073907285 %)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | sum of square deviations: 226022842.5
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | sum of deviations: -6862895188.5
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | mean x: 1773875106.5
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | mean y: 2515740.7666666666
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | intersect: 53863969736.94308
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | chi2: 0.9065708753103098
[2026-03-19 00:51:40] 2026-03-18 23:50:49,262 | INFO     | current chi2=0.9065708753103098 (change=0.026956288790202215 %)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | left removable region: 20
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | sum of square deviations: 101843770.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | sum of deviations: 2366800.000000001
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | mean x: 1773875076.0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | mean y: 2539420.115942029
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | intersect: -38684579.446100906
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | chi2: 0.00016371519857007243
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | current memory leak: 0.02 B/s (using 69 data points, chi2=0.00)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | could have reported an average CPU frequency of 2365 MHz (7 samples)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | ..............................
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | . Timing measurements:
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | . get job = 0 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | . initial setup = 2 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | . payload setup = 3 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | . stage-in = 0 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | . payload execution = 6061 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,263 | INFO     | . stage-out = 0 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,264 | INFO     | . log creation = 0 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,264 | INFO     | ..............................
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | 
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | job summary report
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | --------------------------------------------------
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | PanDA job id: 7056899656
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | task id: 49176553
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | errors: (none)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | pilot state: finished 
[2026-03-19 00:51:40] 2026-03-18 23:50:49,309 | INFO     | transexitcode: 0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | exeerrorcode: 0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | exeerrordiag: 
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | exitcode: 0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | exitmsg: OK
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | cpuconsumptiontime: 45133 s
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | nevents: 400
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | neventsw: 0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | pid: 12559
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | pgrp: 12559
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | corecount: 8
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | event service: False
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | sizes: {0: 2280422, 11: 2280422, 6068: 2307409, 6070: 2316437, 6071: 2316493, 6073: 2316687}
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | --------------------------------------------------
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | 
[2026-03-19 00:51:40] 2026-03-18 23:50:49,310 | INFO     | executing command: ls -lF /tmp/job_11341401/atlas/pilot/slots/0
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | job 7056899656 has completed (purged errors)
[2026-03-19 00:51:40] 2026-03-18 23:50:49,321 | INFO     | overall cleanup function is called
[2026-03-19 00:51:40] 2026-03-18 23:50:50,327 | INFO     | --- collectZombieJob: --- 10, [12559]
[2026-03-19 00:51:40] 2026-03-18 23:50:50,327 | INFO     | zombie collector waiting for pid 12559
[2026-03-19 00:51:40] 2026-03-18 23:50:50,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 00:51:40] 2026-03-18 23:50:50,327 | INFO     | collected zombie processes
[2026-03-19 00:51:40] 2026-03-18 23:50:50,327 | INFO     | will attempt to kill all subprocesses of pid=12559
[2026-03-19 00:51:40] 2026-03-18 23:50:50,440 | INFO     | process IDs to be killed: [12559] (in reverse order)
[2026-03-19 00:51:40] 2026-03-18 23:50:50,481 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 00:51:40] 2026-03-18 23:50:50,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 00:51:40] 2026-03-18 23:50:50,485 | INFO     | did not find any defunct processes belonging to 12559
[2026-03-19 00:51:40] 2026-03-18 23:50:50,488 | INFO     | did not find any defunct processes belonging to 12559
[2026-03-19 00:51:40] 2026-03-18 23:50:50,488 | INFO     | ready for new job
[2026-03-19 00:51:40] 2026-03-18 23:50:50,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 00:51:40] 2026-03-18 23:50:50,489 | INFO     | **************************************
[2026-03-19 00:51:40] 2026-03-18 23:50:50,489 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 00:51:40] 2026-03-18 23:50:50,489 | INFO     | **************************************
[2026-03-19 00:51:40] 2026-03-18 23:50:50,489 | INFO     | 
[2026-03-19 00:51:40] 2026-03-18 23:50:50,504 | INFO     | architecture information:
[2026-03-19 00:51:40] 2026-03-18 23:50:50,504 | INFO     | executing command: cat /etc/os-release
[2026-03-19 00:51:40] 2026-03-18 23:50:50,510 | INFO     | cat /etc/os-release:
[2026-03-19 00:51:40] NAME="CentOS Linux"
[2026-03-19 00:51:40] VERSION="7 (Core)"
[2026-03-19 00:51:40] ID="centos"
[2026-03-19 00:51:40] ID_LIKE="rhel fedora"
[2026-03-19 00:51:40] VERSION_ID="7"
[2026-03-19 00:51:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 00:51:40] ANSI_COLOR="0;31"
[2026-03-19 00:51:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 00:51:40] HOME_URL="https://www.centos.org/"
[2026-03-19 00:51:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 00:51:40] 
[2026-03-19 00:51:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 00:51:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 00:51:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 00:51:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 00:51:40] 
[2026-03-19 00:51:40] 2026-03-18 23:50:50,510 | INFO     | **************************************
[2026-03-19 00:51:40] 2026-03-18 23:50:51,013 | INFO     | executing command: df -mP /tmp/job_11341401/atlas/pilot/slots/0
[2026-03-19 00:51:40] 2026-03-18 23:50:51,019 | INFO     | sufficient remaining disk space (223725223936 B)
[2026-03-19 00:51:40] 2026-03-18 23:50:51,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 00:51:40] 2026-03-18 23:50:51,019 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 00:51:40] 2026-03-18 23:50:51,019 | INFO     | update_server=False
[2026-03-19 00:51:40] 2026-03-18 23:50:51,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 00:51:40] 2026-03-18 23:50:51,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:51:40] 2026-03-18 23:50:51,027 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-19 00:51:40] 2026-03-18 23:50:51,027 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-19 00:51:40] 2026-03-18 23:50:51,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:51:40] 2026-03-18 23:50:51,027 | INFO     | will abort loop
[2026-03-19 00:51:40] 2026-03-18 23:50:51,110 | INFO     | all job control threads have been joined
[2026-03-19 00:51:40] 2026-03-18 23:50:51,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 00:51:40] 2026-03-18 23:50:51,880 | INFO     | all data control threads have been joined
[2026-03-19 00:51:40] 2026-03-18 23:50:52,022 | INFO     | [job] queue monitor thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,024 | INFO     | [job] retrieve thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,032 | INFO     | [job] job monitor thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,055 | INFO     | [data] copytool_in thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,115 | INFO     | [job] control thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,226 | INFO     | [job] validate thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,392 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,439 | INFO     | all payload control threads have been joined
[2026-03-19 00:51:40] 2026-03-18 23:50:52,807 | INFO     | [payload] failed_post thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,830 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:52,885 | INFO     | [data] control thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:53,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 00:51:40] 2026-03-18 23:50:53,383 | INFO     | [payload] validate_post thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:53,444 | INFO     | [payload] control thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:53,502 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:53,539 | INFO     | [data] copytool_out thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:50:57,319 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:51:01,634 | INFO     | job.realtimelogging is not enabled
[2026-03-19 00:51:40] 2026-03-18 23:51:02,639 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 00:51:40] 2026-03-18 23:51:21,123 | INFO     | PID=6441 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-19 00:51:40] 2026-03-18 23:51:21,123 | INFO     | .. there are 7 such processes running
[2026-03-19 00:51:40] 2026-03-18 23:51:21,123 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 00:51:40] 2026-03-18 23:51:21,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 00:51:40] 2026-03-18 23:51:21,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 00:51:40] 2026-03-18 23:51:34,428 | INFO     | [monitor] cgroup control has ended
[2026-03-19 00:51:40] 2026-03-18 23:51:35,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-19 00:51:40] 2026-03-18 23:51:35,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 00:51:40] 2026-03-18 23:51:35,193 | INFO     | [monitor] control thread has ended
[2026-03-19 00:51:40] 2026-03-18 23:51:40,104 | INFO     | all workflow threads have been joined
[2026-03-19 00:51:40] 2026-03-18 23:51:40,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 00:51:40] 2026-03-18 23:51:40,104 | INFO     | traces error code: 0
[2026-03-19 00:51:40] 2026-03-18 23:51:40,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 00:51:40] 2026-03-18 23:51:40,156 [wrapper] ==== pilot stdout END ====
[2026-03-19 00:51:40] 2026-03-18 23:51:40,158 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 00:51:40] 2026-03-18 23:51:40,159 [wrapper] pilotpid: 6441
[2026-03-19 00:51:40] 2026-03-18 23:51:40,160 [wrapper] Pilot exit status: 0
[2026-03-19 00:51:40] 2026-03-18 23:51:40,164 [wrapper] pandaids: 7056899656
[2026-03-19 00:51:40] 2026-03-18 23:51:40,190 [wrapper] cleanup supervisor_pilot  3789 6442
[2026-03-19 00:51:40] 2026-03-18 23:51:40,192 [wrapper] Test setup, not cleaning
[2026-03-19 00:51:40] 2026-03-18 23:51:40,193 [wrapper] apfmon messages muted
[2026-03-19 00:51:40] 2026-03-18 23:51:40,194 [wrapper] ==== wrapper stdout END ====
[2026-03-19 00:51:40] 2026-03-18 23:51:40,195 [wrapper] ==== wrapper stderr END ====
[2026-03-19 00:51:40]  *** Error codes and diagnostics ***
[2026-03-19 00:51:40]     "exeErrorCode": 0,
[2026-03-19 00:51:40]     "exeErrorDiag": "",
[2026-03-19 00:51:40]     "pilotErrorCode": 0,
[2026-03-19 00:51:40]     "pilotErrorDiag": "",
[2026-03-19 00:51:40]  *** Listing of results directory ***
[2026-03-19 00:51:40] total 469484
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user    585013 Mar 16 13:24 pilot3.tar.gz
[2026-03-19 00:51:40] -rwx------ 1 mf493845 unix-user     36322 Mar 16 14:06 runpilot2-wrapper.sh
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      5111 Mar 16 14:10 queuedata.json
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user       100 Mar 18 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 00:51:40] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 18 22:08 run_atlas
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user       105 Mar 18 22:08 job.xml
[2026-03-19 00:51:40] -rw-r--r-- 2 mf493845 unix-user 240366690 Mar 18 23:09 EVNT.49134354._000004.pool.root.1
[2026-03-19 00:51:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 23:09 start_atlas.sh
[2026-03-19 00:51:40] drwxrwx--x 2 mf493845 unix-user       100 Mar 18 23:09 shared
[2026-03-19 00:51:40] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 18 23:09 input.tar.gz
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      6387 Mar 18 23:09 init_data.xml
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user         0 Mar 18 23:09 boinc_setup_complete
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      8192 Mar 18 23:09 boinc_mmap_file
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user         0 Mar 18 23:09 boinc_lockfile
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      2612 Mar 18 23:09 pandaJob.out
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user   1010366 Mar 18 23:09 agis_schedconf.cvmfs.json
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user   1511579 Mar 18 23:09 agis_ddmendpoints.agis.ALL.json
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user       420 Mar 18 23:09 workernode_map.json
[2026-03-19 00:51:40] drwx------ 5 mf493845 unix-user       440 Mar 18 23:09 pilot3
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user 234008935 Mar 19 00:50 HITS.49176553._000076.pool.root.1
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      1026 Mar 19 00:50 memory_monitor_summary.json
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user    330947 Mar 19 00:50 log.49176553._000076.job.log.tgz.1
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user        95 Mar 19 00:50 pilot_heartbeat.json
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      6291 Mar 19 00:50 heartbeat.json
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      5088 Mar 19 00:51 pilotlog.txt
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user    899924 Mar 19 00:51 log.49176553._000076.job.log.1
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user       357 Mar 19 00:51 output.list
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user       620 Mar 19 00:51 runtime_log
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user   1249280 Mar 19 00:51 result.tar.gz
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user       646 Mar 19 00:51 x0UNDmhpMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmuPwLDmRbyoWo.diag
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user      9219 Mar 19 00:51 runtime_log.err
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user     21464 Mar 19 00:51 stderr.txt
[2026-03-19 00:51:40] HITS file was successfully produced:
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user 234008935 Mar 19 00:50 shared/HITS.pool.root.1
[2026-03-19 00:51:40]  *** Contents of shared directory: ***
[2026-03-19 00:51:40] total 465084
[2026-03-19 00:51:40] -rw-r--r-- 2 mf493845 unix-user 240366690 Mar 18 23:09 ATLAS.root_0
[2026-03-19 00:51:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 18 23:09 start_atlas.sh
[2026-03-19 00:51:40] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 18 23:09 input.tar.gz
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user 234008935 Mar 19 00:50 HITS.pool.root.1
[2026-03-19 00:51:40] -rw------- 1 mf493845 unix-user   1249280 Mar 19 00:51 result.tar.gz
00:51:41 (1653): run_atlas exited; CPU time 45222.095887
00:51:41 (1653): called boinc_finish(0)

</stderr_txt>
]]>

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